RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 SCN1AP35498 2009 aa8.55□□□□□ -1.04
ABCA4-207ENST00000536513 FAM189A1O60320 539 aa8.55□□□□□ -1.04
ABCA4-207ENST00000536513 PROSCO94903 275 aa8.55□□□□□ -1.04
ABCA4-207ENST00000536513 UNGP13051 313 aaPredicted RBP8.55□□□□□ -1.04
ABCA4-207ENST00000536513 SAT1P21673 171 aa8.55□□□□□ -1.04
ABCA4-207ENST00000536513 FECHP22830 423 aa8.55□□□□□ -1.04
ABCA4-207ENST00000536513 MMP8P22894 467 aa8.55□□□□□ -1.04
ABCA4-207ENST00000536513 ARSEP51690 589 aa8.55□□□□□ -1.04
ABCA4-207ENST00000536513 AP1B1Q10567 949 aa8.55□□□□□ -1.04
ABCA4-207ENST00000536513 C6orf163Q5TEZ5 329 aa8.55□□□□□ -1.04
ABCA4-207ENST00000536513 KDM7AQ6ZMT4 941 aa8.55□□□□□ -1.04
ABCA4-207ENST00000536513 C15orf39Q6ZRI6 1047 aa8.55□□□□□ -1.04
ABCA4-207ENST00000536513 JAMLQ86YT9 394 aa8.55□□□□□ -1.04
ABCA4-207ENST00000536513 CTAGE3PQ8IX95 158 aa8.55□□□□□ -1.04
ABCA4-207ENST00000536513 THEM5Q8N1Q8 247 aa8.55□□□□□ -1.04
ABCA4-207ENST00000536513 SPATA18Q8TC71 538 aa8.55□□□□□ -1.04
ABCA4-207ENST00000536513 RNF139Q8WU17 664 aa8.55□□□□□ -1.04
ABCA4-207ENST00000536513 DPF3Q92784 378 aa8.55□□□□□ -1.04
ABCA4-207ENST00000536513 PCED1BQ96HM7 432 aa8.55□□□□□ -1.04
ABCA4-207ENST00000536513 YME1L1Q96TA2 773 aa8.55□□□□□ -1.04
ABCA4-207ENST00000536513 APOL2Q9BQE5 337 aa8.55□□□□□ -1.04
ABCA4-207ENST00000536513 TRPC7Q9HCX4 862 aa8.55□□□□□ -1.04
ABCA4-207ENST00000536513 DNPEPQ9ULA0 475 aa8.55□□□□□ -1.04
ABCA4-207ENST00000536513 USP18Q9UMW8 372 aa8.55□□□□□ -1.04
ABCA4-207ENST00000536513 TMA7Q9Y2S6 64 aaKnown RBP8.55□□□□□ -1.04
ABCA4-207ENST00000536513 OTOFQ9HC10 1997 aa8.55□□□□□ -1.04
ABCA4-207ENST00000536513 TRIP11Q15643 1979 aa8.55□□□□□ -1.04
ABCA4-207ENST00000536513 E2F8A0AVK6 867 aa8.55□□□□□ -1.04
ABCA4-207ENST00000536513 CCT8L1PA6NM43 557 aa8.55□□□□□ -1.04
ABCA4-207ENST00000536513 MAPK13O15264 365 aa8.55□□□□□ -1.04
ABCA4-207ENST00000536513 OPHN1O60890 802 aa8.55□□□□□ -1.04
ABCA4-207ENST00000536513 ATP2A2P16615 1042 aaKnown RBP8.55□□□□□ -1.04
ABCA4-207ENST00000536513 GPD1P21695 349 aa8.55□□□□□ -1.04
ABCA4-207ENST00000536513 MSH2P43246 934 aa8.55□□□□□ -1.04
ABCA4-207ENST00000536513 GLE1Q53GS7 698 aaKnown RBP8.55□□□□□ -1.04
ABCA4-207ENST00000536513 UBXN11Q5T124 520 aa8.55□□□□□ -1.04
ABCA4-207ENST00000536513 MIPOL1Q8TD10 442 aa8.55□□□□□ -1.04
ABCA4-207ENST00000536513 EMID1Q96A84 441 aaPredicted RBP8.55□□□□□ -1.04
ABCA4-207ENST00000536513 HERPUD2Q9BSE4 406 aa8.55□□□□□ -1.04
ABCA4-207ENST00000536513 DNAI2Q9GZS0 605 aa8.55□□□□□ -1.04
ABCA4-207ENST00000536513 WNT8AQ9H1J5 351 aa8.55□□□□□ -1.04
ABCA4-207ENST00000536513 PAPOLBQ9NRJ5 636 aaKnown RBP8.55□□□□□ -1.04
ABCA4-207ENST00000536513 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.55□□□□□ -1.04
ABCA4-207ENST00000536513 STRIP2Q9ULQ0 834 aa8.55□□□□□ -1.04
ABCA4-207ENST00000536513 RLFQ13129 1914 aa8.54□□□□□ -1.04
ABCA4-207ENST00000536513 DICER1Q9UPY3 1922 aaKnown RBP8.54□□□□□ -1.04
ABCA4-207ENST00000536513 COL1A2P08123 1366 aa8.54□□□□□ -1.04
ABCA4-207ENST00000536513 C9IYK1 514 aa8.54□□□□□ -1.04
ABCA4-207ENST00000536513 ATP6V1G2O95670 118 aa8.54□□□□□ -1.04
ABCA4-207ENST00000536513 TBX18O95935 607 aa8.54□□□□□ -1.04
ABCA4-207ENST00000536513 ALDH2P05091 517 aa8.54□□□□□ -1.04
ABCA4-207ENST00000536513 CSF2RAP15509 400 aa8.54□□□□□ -1.04
ABCA4-207ENST00000536513 SLMAPQ14BN4 828 aa8.54□□□□□ -1.04
ABCA4-207ENST00000536513 ZNF697Q5TEC3 545 aa8.54□□□□□ -1.04
ABCA4-207ENST00000536513 TRIM72Q6ZMU5 477 aa8.54□□□□□ -1.04
ABCA4-207ENST00000536513 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.54□□□□□ -1.04
ABCA4-207ENST00000536513 MON1BQ7L1V2 547 aa8.54□□□□□ -1.04
ABCA4-207ENST00000536513 TFAP2DQ7Z6R9 452 aa8.54□□□□□ -1.04
ABCA4-207ENST00000536513 ACTL9Q8TC94 416 aa8.54□□□□□ -1.04
ABCA4-207ENST00000536513 TEKT4Q8WW24 435 aa8.54□□□□□ -1.04
ABCA4-207ENST00000536513 USP6NLQ92738 828 aa8.54□□□□□ -1.04
ABCA4-207ENST00000536513 MYLPFQ96A32 169 aa8.54□□□□□ -1.04
ABCA4-207ENST00000536513 FAM81BQ96LP2 452 aa8.54□□□□□ -1.04
ABCA4-207ENST00000536513 ZNF512Q96ME7 567 aaPredicted RBP8.54□□□□□ -1.04
ABCA4-207ENST00000536513 RAB3IPQ96QF0 476 aaPredicted RBP8.54□□□□□ -1.04
ABCA4-207ENST00000536513 FMO2Q99518 471 aa8.54□□□□□ -1.04
ABCA4-207ENST00000536513 SLC38A7Q9NVC3 462 aa8.54□□□□□ -1.04
ABCA4-207ENST00000536513 ASNSD1Q9NWL6 643 aa8.54□□□□□ -1.04
ABCA4-207ENST00000536513 ETAA1Q9NY74 926 aa8.54□□□□□ -1.04
ABCA4-207ENST00000536513 PTPRFP10586 1907 aa8.54□□□□□ -1.04
ABCA4-207ENST00000536513 MBLAC1A4D2B0 266 aaPredicted RBP8.54□□□□□ -1.04
ABCA4-207ENST00000536513 MIF4GDA9UHW6 222 aaKnown RBP8.54□□□□□ -1.04
ABCA4-207ENST00000536513 KCNK1O00180 336 aa8.54□□□□□ -1.04
ABCA4-207ENST00000536513 KPNA6O60684 536 aa8.54□□□□□ -1.04
ABCA4-207ENST00000536513 DDHD2O94830 711 aa8.54□□□□□ -1.04
ABCA4-207ENST00000536513 CYP3A5P20815 502 aa8.54□□□□□ -1.04
ABCA4-207ENST00000536513 PROZP22891 400 aa8.54□□□□□ -1.04
ABCA4-207ENST00000536513 AMPD1P23109 780 aa8.54□□□□□ -1.04
ABCA4-207ENST00000536513 MLLT3P42568 568 aaPredicted RBP8.54□□□□□ -1.04
ABCA4-207ENST00000536513 OTUD4Q01804 1114 aaKnown RBP8.54□□□□□ -1.04
ABCA4-207ENST00000536513 CENPCQ03188 943 aa8.54□□□□□ -1.04
ABCA4-207ENST00000536513 DEUP1Q05D60 604 aa8.54□□□□□ -1.04
ABCA4-207ENST00000536513 BTG3Q14201 252 aaPredicted RBP8.54□□□□□ -1.04
ABCA4-207ENST00000536513 P3H1Q32P28 736 aa8.54□□□□□ -1.04
ABCA4-207ENST00000536513 ANKRD20A8PQ5CZ79 823 aa8.54□□□□□ -1.04
ABCA4-207ENST00000536513 NOMO2Q5JPE7 1267 aa8.54□□□□□ -1.04
ABCA4-207ENST00000536513 FOXR2Q6PJQ5 311 aa8.54□□□□□ -1.04
ABCA4-207ENST00000536513 TTC9BQ8N6N2 239 aa8.54□□□□□ -1.04
ABCA4-207ENST00000536513 SLAIN1Q8ND83 568 aa8.54□□□□□ -1.04
ABCA4-207ENST00000536513 P3H4Q92791 437 aa8.54□□□□□ -1.04
ABCA4-207ENST00000536513 DLGAP2Q9P1A6 1054 aa8.54□□□□□ -1.04
ABCA4-207ENST00000536513 ANAPC5Q9UJX4 755 aa8.54□□□□□ -1.04
ABCA4-207ENST00000536513 XIRP2A4UGR9 3374 aa8.54□□□□□ -1.04
ABCA4-207ENST00000536513 CCDC189A1A4V9 331 aa8.54□□□□□ -1.04
ABCA4-207ENST00000536513 POM121CA8CG34 1229 aa8.54□□□□□ -1.04
ABCA4-207ENST00000536513 AGPSO00116 658 aa8.54□□□□□ -1.04
ABCA4-207ENST00000536513 PAPSS1O43252 624 aaPredicted RBP8.54□□□□□ -1.04
ABCA4-207ENST00000536513 RBP3P10745 1247 aa8.54□□□□□ -1.04
ABCA4-207ENST00000536513 IL1R2P27930 398 aa8.54□□□□□ -1.04
ABCA4-207ENST00000536513 EFEMP1Q12805 493 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms