RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 EEPD1Q7L9B9 569 aa13.89□□□□□ -0.19
HDAC4-214ENST00000535493 LRRC71Q8N4P6 559 aa13.89□□□□□ -0.19
HDAC4-214ENST00000535493 STKLD1Q8NE28 680 aa13.89□□□□□ -0.19
HDAC4-214ENST00000535493 SLC7A3Q8WY07 619 aa13.89□□□□□ -0.19
HDAC4-214ENST00000535493 ATXN7L3BQ96GX2 97 aa13.89□□□□□ -0.19
HDAC4-214ENST00000535493 C7orf26Q96N11 449 aa13.89□□□□□ -0.19
HDAC4-214ENST00000535493 GCNAQ96QF7 691 aa13.89□□□□□ -0.19
HDAC4-214ENST00000535493 S100A14Q9HCY8 104 aa13.89□□□□□ -0.19
HDAC4-214ENST00000535493 SOX13Q9UN79 622 aa13.89□□□□□ -0.19
HDAC4-214ENST00000535493 AK5Q9Y6K8 562 aa13.89□□□□□ -0.19
HDAC4-214ENST00000535493 ADGRA2Q96PE1 1338 aa13.89□□□□□ -0.19
HDAC4-214ENST00000535493 SLC15A5A6NIM6 579 aa13.88□□□□□ -0.19
HDAC4-214ENST00000535493 ATG7O95352 703 aa13.88□□□□□ -0.19
HDAC4-214ENST00000535493 METTL18O95568 372 aa13.88□□□□□ -0.19
HDAC4-214ENST00000535493 LSM8O95777 96 aaKnown RBP13.88□□□□□ -0.19
HDAC4-214ENST00000535493 BPGMP07738 259 aa13.88□□□□□ -0.19
HDAC4-214ENST00000535493 OSBPP22059 807 aa13.88□□□□□ -0.19
HDAC4-214ENST00000535493 RGS7P49802 495 aa13.88□□□□□ -0.19
HDAC4-214ENST00000535493 CDK7P50613 346 aa13.88□□□□□ -0.19
HDAC4-214ENST00000535493 CA9Q16790 459 aa13.88□□□□□ -0.19
HDAC4-214ENST00000535493 GRAMD1BQ3KR37 738 aa13.88□□□□□ -0.19
HDAC4-214ENST00000535493 XKR3Q5GH77 459 aa13.88□□□□□ -0.19
HDAC4-214ENST00000535493 PRAMEF18Q5VWM3 479 aa13.88□□□□□ -0.19
HDAC4-214ENST00000535493 PHTF2Q8N3S3 785 aa13.88□□□□□ -0.19
HDAC4-214ENST00000535493 CMASQ8NFW8 434 aaPredicted RBP13.88□□□□□ -0.19
HDAC4-214ENST00000535493 GDPD5Q8WTR4 605 aa13.88□□□□□ -0.19
HDAC4-214ENST00000535493 PRPF31Q8WWY3 499 aaKnown RBP13.88□□□□□ -0.19
HDAC4-214ENST00000535493 NR1H4Q96RI1 486 aaPredicted RBP13.88□□□□□ -0.19
HDAC4-214ENST00000535493 PPP1R16BQ96T49 567 aa13.88□□□□□ -0.19
HDAC4-214ENST00000535493 OXCT2Q9BYC2 517 aaPredicted RBP13.88□□□□□ -0.19
HDAC4-214ENST00000535493 CEP41Q9BYV8 373 aa13.88□□□□□ -0.19
HDAC4-214ENST00000535493 SDR42E2A6NKP2 422 aa13.88□□□□□ -0.19
HDAC4-214ENST00000535493 VWA5AO00534 786 aa13.88□□□□□ -0.19
HDAC4-214ENST00000535493 FKBP1AP62942 108 aaKnown RBP13.88□□□□□ -0.19
HDAC4-214ENST00000535493 PRKG1Q13976 671 aa13.88□□□□□ -0.19
HDAC4-214ENST00000535493 CCNIQ14094 377 aa13.88□□□□□ -0.19
HDAC4-214ENST00000535493 EFHC1Q5JVL4 640 aa13.88□□□□□ -0.19
HDAC4-214ENST00000535493 ANGEL2Q5VTE6 544 aaKnown RBP13.88□□□□□ -0.19
HDAC4-214ENST00000535493 CES3Q6UWW8 571 aa13.88□□□□□ -0.19
HDAC4-214ENST00000535493 MAVSQ7Z434 540 aa13.88□□□□□ -0.19
HDAC4-214ENST00000535493 ARHGAP22Q7Z5H3 698 aa13.88□□□□□ -0.19
HDAC4-214ENST00000535493 DHDDSQ86SQ9 333 aa13.88□□□□□ -0.19
HDAC4-214ENST00000535493 HACE1Q8IYU2 909 aa13.88□□□□□ -0.19
HDAC4-214ENST00000535493 DEFB107AQ8IZN7 70 aa13.88□□□□□ -0.19
HDAC4-214ENST00000535493 SDCBP2Q9H190 292 aa13.88□□□□□ -0.19
HDAC4-214ENST00000535493 CAPN8A6NHC0 703 aa13.87□□□□□ -0.19
HDAC4-214ENST00000535493 M0QYV0 167 aa13.87□□□□□ -0.19
HDAC4-214ENST00000535493 WDR46O15213 610 aaKnown RBP13.87□□□□□ -0.19
HDAC4-214ENST00000535493 ADCY6O43306 1168 aa13.87□□□□□ -0.19
HDAC4-214ENST00000535493 MED21Q13503 144 aa13.87□□□□□ -0.19
HDAC4-214ENST00000535493 GK3PQ14409 553 aa13.87□□□□□ -0.19
HDAC4-214ENST00000535493 NOMO1Q15155 1222 aa13.87□□□□□ -0.19
HDAC4-214ENST00000535493 GSTA3Q16772 222 aa13.87□□□□□ -0.19
HDAC4-214ENST00000535493 DUOXA2Q1HG44 320 aa13.87□□□□□ -0.19
HDAC4-214ENST00000535493 MMEL1Q495T6 779 aa13.87□□□□□ -0.19
HDAC4-214ENST00000535493 RABGAP1LQ5R372 815 aa13.87□□□□□ -0.19
HDAC4-214ENST00000535493 SLFN12LQ6IEE8 588 aa13.87□□□□□ -0.19
HDAC4-214ENST00000535493 RSBN1LQ6PCB5 846 aaPredicted RBP13.87□□□□□ -0.19
HDAC4-214ENST00000535493 FBXL19Q6PCT2 694 aa13.87□□□□□ -0.19
HDAC4-214ENST00000535493 FAM172AQ8WUF8 416 aa13.87□□□□□ -0.19
HDAC4-214ENST00000535493 AZIN2Q96A70 460 aa13.87□□□□□ -0.19
HDAC4-214ENST00000535493 PGBD4Q96DM1 585 aa13.87□□□□□ -0.19
HDAC4-214ENST00000535493 ADPGKQ9BRR6 497 aa13.87□□□□□ -0.19
HDAC4-214ENST00000535493 NGRNQ9NPE2 291 aaKnown RBP13.87□□□□□ -0.19
HDAC4-214ENST00000535493 MAGED2Q9UNF1 606 aaPredicted RBP13.87□□□□□ -0.19
HDAC4-214ENST00000535493 KLF11O14901 512 aa13.87□□□□□ -0.19
HDAC4-214ENST00000535493 B4GALT5O43286 388 aa13.87□□□□□ -0.19
HDAC4-214ENST00000535493 SIN3BO75182 1162 aa13.87□□□□□ -0.19
HDAC4-214ENST00000535493 ZBED1O96006 694 aa13.87□□□□□ -0.19
HDAC4-214ENST00000535493 LDHAP00338 332 aaKnown RBP13.87□□□□□ -0.19
HDAC4-214ENST00000535493 APOEP02649 317 aa13.87□□□□□ -0.19
HDAC4-214ENST00000535493 SERPINA6P08185 405 aa13.87□□□□□ -0.19
HDAC4-214ENST00000535493 RAG1P15918 1043 aa13.87□□□□□ -0.19
HDAC4-214ENST00000535493 PDGFRAP16234 1089 aa13.87□□□□□ -0.19
HDAC4-214ENST00000535493 VCLP18206 1134 aa13.87□□□□□ -0.19
HDAC4-214ENST00000535493 ABCG1P45844 678 aa13.87□□□□□ -0.19
HDAC4-214ENST00000535493 GTF2A2P52657 109 aa13.87□□□□□ -0.19
HDAC4-214ENST00000535493 ATXN1P54253 815 aaKnown RBP13.87□□□□□ -0.19
HDAC4-214ENST00000535493 KRT81Q14533 505 aa13.87□□□□□ -0.19
HDAC4-214ENST00000535493 TMEM132AQ24JP5 1023 aa13.87□□□□□ -0.19
HDAC4-214ENST00000535493 MARK2Q7KZI7 788 aaKnown RBP13.87□□□□□ -0.19
HDAC4-214ENST00000535493 PDSS2Q86YH6 399 aa13.87□□□□□ -0.19
HDAC4-214ENST00000535493 RNF148Q8N7C7 305 aa13.87□□□□□ -0.19
HDAC4-214ENST00000535493 PLD5Q8N7P1 536 aa13.87□□□□□ -0.19
HDAC4-214ENST00000535493 DEPDC1BQ8WUY9 529 aa13.87□□□□□ -0.19
HDAC4-214ENST00000535493 PPP2R3CQ969Q6 453 aa13.87□□□□□ -0.19
HDAC4-214ENST00000535493 XYLT2Q9H1B5 865 aa13.87□□□□□ -0.19
HDAC4-214ENST00000535493 ZNF302Q9NR11 478 aa13.87□□□□□ -0.19
HDAC4-214ENST00000535493 STK32BQ9NY57 414 aa13.87□□□□□ -0.19
HDAC4-214ENST00000535493 PPME1Q9Y570 386 aa13.87□□□□□ -0.19
HDAC4-214ENST00000535493 CCDC160A6NGH7 325 aa13.86□□□□□ -0.19
HDAC4-214ENST00000535493 DCXO43602 365 aa13.86□□□□□ -0.19
HDAC4-214ENST00000535493 SNNO75324 88 aaPredicted RBP13.86□□□□□ -0.19
HDAC4-214ENST00000535493 GSRP00390 522 aa13.86□□□□□ -0.19
HDAC4-214ENST00000535493 POLR2BP30876 1174 aaKnown RBP13.86□□□□□ -0.19
HDAC4-214ENST00000535493 PGGT1BP53609 377 aa13.86□□□□□ -0.19
HDAC4-214ENST00000535493 YWHAEP62258 255 aaKnown RBP13.86□□□□□ -0.19
HDAC4-214ENST00000535493 SLC5A9Q2M3M2 681 aa13.86□□□□□ -0.19
HDAC4-214ENST00000535493 EML3Q32P44 896 aa13.86□□□□□ -0.19
HDAC4-214ENST00000535493 DNAL1Q4LDG9 190 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms