RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 IGF2BP3O00425 579 aaKnown RBP eCLIP15.92■□□□□ 0.14
CACNA1E-208ENST00000533229 TREHO43280 583 aa15.92■□□□□ 0.14
CACNA1E-208ENST00000533229 NQO1P15559 274 aaKnown RBP15.92■□□□□ 0.14
CACNA1E-208ENST00000533229 TKTP29401 623 aaKnown RBP15.92■□□□□ 0.14
CACNA1E-208ENST00000533229 RPL34P49207 117 aaKnown RBP15.92■□□□□ 0.14
CACNA1E-208ENST00000533229 ADAM17P78536 824 aa15.92■□□□□ 0.14
CACNA1E-208ENST00000533229 SNX17Q15036 470 aa15.92■□□□□ 0.14
CACNA1E-208ENST00000533229 FAM110CQ1W6H9 321 aa15.92■□□□□ 0.14
CACNA1E-208ENST00000533229 UBXN11Q5T124 520 aa15.92■□□□□ 0.14
CACNA1E-208ENST00000533229 ASRGL1Q7L266 308 aa15.92■□□□□ 0.14
CACNA1E-208ENST00000533229 VSIG1Q86XK7 387 aa15.92■□□□□ 0.14
CACNA1E-208ENST00000533229 PYROXD2Q8N2H3 581 aa15.92■□□□□ 0.14
CACNA1E-208ENST00000533229 ARRDC4Q8NCT1 418 aa15.92■□□□□ 0.14
CACNA1E-208ENST00000533229 PTPRN2Q92932 1015 aa15.92■□□□□ 0.14
CACNA1E-208ENST00000533229 CFAP36Q96G28 342 aa15.92■□□□□ 0.14
CACNA1E-208ENST00000533229 MYLK2Q9H1R3 596 aa15.92■□□□□ 0.14
CACNA1E-208ENST00000533229 POPDC2Q9HBU9 364 aa15.92■□□□□ 0.14
CACNA1E-208ENST00000533229 ALG13Q9NP73 1137 aaKnown RBP15.92■□□□□ 0.14
CACNA1E-208ENST00000533229 CYLDQ9NQC7 956 aa15.92■□□□□ 0.14
CACNA1E-208ENST00000533229 FLRT1Q9NZU1 646 aa15.92■□□□□ 0.14
CACNA1E-208ENST00000533229 CITO14578 2027 aa15.92■□□□□ 0.14
CACNA1E-208ENST00000533229 CXorf49A8MYA2 514 aaPredicted RBP15.92■□□□□ 0.14
CACNA1E-208ENST00000533229 CHUKO15111 745 aa15.92■□□□□ 0.14
CACNA1E-208ENST00000533229 ATP6V1G2O95670 118 aa15.92■□□□□ 0.14
CACNA1E-208ENST00000533229 BCAT1P54687 386 aa15.92■□□□□ 0.14
CACNA1E-208ENST00000533229 PLEKHG4Q58EX7 1191 aa15.92■□□□□ 0.14
CACNA1E-208ENST00000533229 OLFML2BQ68BL8 750 aa15.92■□□□□ 0.14
CACNA1E-208ENST00000533229 KLHL29Q96CT2 875 aa15.92■□□□□ 0.14
CACNA1E-208ENST00000533229 KCTD15Q96SI1 283 aaPredicted RBP15.92■□□□□ 0.14
CACNA1E-208ENST00000533229 ARHGEF3Q9NR81 526 aa15.92■□□□□ 0.14
CACNA1E-208ENST00000533229 AP4E1Q9UPM8 1137 aa15.92■□□□□ 0.14
CACNA1E-208ENST00000533229 TTLL3Q9Y4R7 772 aa15.92■□□□□ 0.14
CACNA1E-208ENST00000533229 CFAP69A5D8W1 941 aa15.91■□□□□ 0.14
CACNA1E-208ENST00000533229 MT-ND3P03897 115 aa15.91■□□□□ 0.14
CACNA1E-208ENST00000533229 KRT16P08779 473 aa15.91■□□□□ 0.14
CACNA1E-208ENST00000533229 GBP2P32456 591 aaPredicted RBP15.91■□□□□ 0.14
CACNA1E-208ENST00000533229 CDC42EP1Q00587 391 aa15.91■□□□□ 0.14
CACNA1E-208ENST00000533229 CCDC15Q0P6D6 951 aa15.91■□□□□ 0.14
CACNA1E-208ENST00000533229 CBLBQ13191 982 aa15.91■□□□□ 0.14
CACNA1E-208ENST00000533229 MFSD10Q14728 455 aa15.91■□□□□ 0.14
CACNA1E-208ENST00000533229 TRIP11Q15643 1979 aa15.91■□□□□ 0.14
CACNA1E-208ENST00000533229 ZNF534Q76KX8 674 aa15.91■□□□□ 0.14
CACNA1E-208ENST00000533229 APBB1IPQ7Z5R6 666 aaPredicted RBP15.91■□□□□ 0.14
CACNA1E-208ENST00000533229 C10orf82Q8WW14 230 aa15.91■□□□□ 0.14
CACNA1E-208ENST00000533229 ERP27Q96DN0 273 aa15.91■□□□□ 0.14
CACNA1E-208ENST00000533229 CSPG4P5Q96PW8 444 aa15.91■□□□□ 0.14
CACNA1E-208ENST00000533229 SMYD2Q9NRG4 433 aa15.91■□□□□ 0.14
CACNA1E-208ENST00000533229 GDAP2Q9NXN4 497 aa15.91■□□□□ 0.14
CACNA1E-208ENST00000533229 SLC15A5A6NIM6 579 aa15.91■□□□□ 0.14
CACNA1E-208ENST00000533229 TM9SF1O15321 606 aa15.91■□□□□ 0.14
CACNA1E-208ENST00000533229 CCNB1P14635 433 aa15.91■□□□□ 0.14
CACNA1E-208ENST00000533229 GRIA1P42261 906 aa15.91■□□□□ 0.14
CACNA1E-208ENST00000533229 ETV4P43268 484 aa15.91■□□□□ 0.14
CACNA1E-208ENST00000533229 MAGEA6P43360 314 aa15.91■□□□□ 0.14
CACNA1E-208ENST00000533229 XKR4Q5GH76 650 aa15.91■□□□□ 0.14
CACNA1E-208ENST00000533229 KCNT2Q6UVM3 1135 aa15.91■□□□□ 0.14
CACNA1E-208ENST00000533229 LIMS2Q7Z4I7 341 aa15.91■□□□□ 0.14
CACNA1E-208ENST00000533229 NETO2Q8NC67 525 aa15.91■□□□□ 0.14
CACNA1E-208ENST00000533229 KLC2Q9H0B6 622 aa15.91■□□□□ 0.14
CACNA1E-208ENST00000533229 PNPLA8Q9NP80 782 aa15.91■□□□□ 0.14
CACNA1E-208ENST00000533229 ZC3H7BQ9UGR2 993 aaKnown RBP15.91■□□□□ 0.14
CACNA1E-208ENST00000533229 USH1CQ9Y6N9 552 aa15.91■□□□□ 0.14
CACNA1E-208ENST00000533229 NUMBLQ9Y6R0 609 aa15.91■□□□□ 0.14
CACNA1E-208ENST00000533229 IQANK1A0A1B0GTG1 560 aa15.9■□□□□ 0.14
CACNA1E-208ENST00000533229 UNCXA6NJT0 531 aa15.9■□□□□ 0.14
CACNA1E-208ENST00000533229 ZNF487B1APH4 448 aa15.9■□□□□ 0.14
CACNA1E-208ENST00000533229 LPXNO60711 386 aa15.9■□□□□ 0.14
CACNA1E-208ENST00000533229 BEST1O76090 585 aa15.9■□□□□ 0.14
CACNA1E-208ENST00000533229 UNC5CO95185 931 aa15.9■□□□□ 0.14
CACNA1E-208ENST00000533229 CD4P01730 458 aa15.9■□□□□ 0.14
CACNA1E-208ENST00000533229 INHBAP08476 426 aa15.9■□□□□ 0.14
CACNA1E-208ENST00000533229 PYGBP11216 843 aa15.9■□□□□ 0.14
CACNA1E-208ENST00000533229 GOT1P17174 413 aa15.9■□□□□ 0.14
CACNA1E-208ENST00000533229 AMPD1P23109 780 aa15.9■□□□□ 0.14
CACNA1E-208ENST00000533229 SNX16P57768 344 aa15.9■□□□□ 0.14
CACNA1E-208ENST00000533229 PITX1P78337 314 aaPredicted RBP15.9■□□□□ 0.14
CACNA1E-208ENST00000533229 SLC45A4Q5BKX6 768 aa15.9■□□□□ 0.14
CACNA1E-208ENST00000533229 NCBP2-AS2Q69YL0 99 aa15.9■□□□□ 0.14
CACNA1E-208ENST00000533229 TLK2Q86UE8 772 aa15.9■□□□□ 0.14
CACNA1E-208ENST00000533229 OSTM1Q86WC4 334 aa15.9■□□□□ 0.14
CACNA1E-208ENST00000533229 FAM131BQ86XD5 332 aa15.9■□□□□ 0.14
CACNA1E-208ENST00000533229 MPP5Q8N3R9 675 aa15.9■□□□□ 0.14
CACNA1E-208ENST00000533229 APPL2Q8NEU8 664 aa15.9■□□□□ 0.14
CACNA1E-208ENST00000533229 ALKBH8Q96BT7 664 aaKnown RBP15.9■□□□□ 0.14
CACNA1E-208ENST00000533229 PARK7Q99497 189 aaKnown RBP15.9■□□□□ 0.14
CACNA1E-208ENST00000533229 NOD2Q9HC29 1040 aa15.9■□□□□ 0.14
CACNA1E-208ENST00000533229 TMPRSS4Q9NRS4 437 aa15.9■□□□□ 0.14
CACNA1E-208ENST00000533229 DTLQ9NZJ0 730 aa15.9■□□□□ 0.14
CACNA1E-208ENST00000533229 GTF2IRD1Q9UHL9 959 aa15.9■□□□□ 0.14
CACNA1E-208ENST00000533229 BAIAP2L1Q9UHR4 511 aa15.9■□□□□ 0.14
CACNA1E-208ENST00000533229 CPA4Q9UI42 421 aa15.9■□□□□ 0.14
CACNA1E-208ENST00000533229 USP3Q9Y6I4 520 aa15.9■□□□□ 0.14
CACNA1E-208ENST00000533229 IKBKGQ9Y6K9 419 aa15.9■□□□□ 0.14
CACNA1E-208ENST00000533229 UGT1A9O60656 530 aa15.89■□□□□ 0.13
CACNA1E-208ENST00000533229 ZNF865P0CJ78 1059 aaPredicted RBP15.89■□□□□ 0.13
CACNA1E-208ENST00000533229 NEK3P51956 506 aa15.89■□□□□ 0.13
CACNA1E-208ENST00000533229 BEX3Q00994 111 aa15.89■□□□□ 0.13
CACNA1E-208ENST00000533229 SLC18A2Q05940 514 aa15.89■□□□□ 0.13
CACNA1E-208ENST00000533229 OVGP1Q12889 678 aa15.89■□□□□ 0.13
CACNA1E-208ENST00000533229 PCBP1Q15365 356 aaKnown RBP eCLIP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms