RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 NLGN4XQ8N0W4 816 aa5.77□□□□□ -1.49
CD44-236ENST00000533222 MLKLQ8NB16 471 aa5.77□□□□□ -1.49
CD44-236ENST00000533222 PPHLN1Q8NEY8 458 aaKnown RBP5.77□□□□□ -1.49
CD44-236ENST00000533222 OR10Z1Q8NGY1 313 aa5.77□□□□□ -1.49
CD44-236ENST00000533222 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.77□□□□□ -1.49
CD44-236ENST00000533222 CHAC2Q8WUX2 184 aa5.77□□□□□ -1.49
CD44-236ENST00000533222 CPA5Q8WXQ8 436 aa5.77□□□□□ -1.49
CD44-236ENST00000533222 CHFRQ96EP1 664 aa5.77□□□□□ -1.49
CD44-236ENST00000533222 FNBP1Q96RU3 617 aa5.77□□□□□ -1.49
CD44-236ENST00000533222 MNTQ99583 582 aa5.77□□□□□ -1.49
CD44-236ENST00000533222 SDF4Q9BRK5 362 aa5.77□□□□□ -1.49
CD44-236ENST00000533222 ORAI3Q9BRQ5 295 aa5.77□□□□□ -1.49
CD44-236ENST00000533222 CENPOQ9BU64 300 aa5.77□□□□□ -1.49
CD44-236ENST00000533222 MRPL1Q9BYD6 325 aaKnown RBP5.77□□□□□ -1.49
CD44-236ENST00000533222 OSBPL6Q9BZF3 934 aa5.77□□□□□ -1.49
CD44-236ENST00000533222 CRNKL1Q9BZJ0 848 aaKnown RBP5.77□□□□□ -1.49
CD44-236ENST00000533222 IFT22Q9H7X7 185 aa5.77□□□□□ -1.49
CD44-236ENST00000533222 KAT14Q9H8E8 782 aa5.77□□□□□ -1.49
CD44-236ENST00000533222 CD320Q9NPF0 282 aa5.77□□□□□ -1.49
CD44-236ENST00000533222 PFDN4Q9NQP4 134 aa5.77□□□□□ -1.49
CD44-236ENST00000533222 STARD7Q9NQZ5 370 aa5.77□□□□□ -1.49
CD44-236ENST00000533222 ZNF277Q9NRM2 450 aaPredicted RBP5.77□□□□□ -1.49
CD44-236ENST00000533222 DDX19AQ9NUU7 478 aaKnown RBP5.77□□□□□ -1.49
CD44-236ENST00000533222 EXTL2Q9UBQ6 330 aa5.77□□□□□ -1.49
CD44-236ENST00000533222 SEC63Q9UGP8 760 aaKnown RBP5.77□□□□□ -1.49
CD44-236ENST00000533222 HMGXB4Q9UGU5 601 aa5.77□□□□□ -1.49
CD44-236ENST00000533222 IFT52Q9Y366 437 aa5.77□□□□□ -1.49
CD44-236ENST00000533222 CAB39Q9Y376 341 aaPredicted RBP5.77□□□□□ -1.49
CD44-236ENST00000533222 L3MBTL1Q9Y468 752 aa5.77□□□□□ -1.49
CD44-236ENST00000533222 B3GALT1Q9Y5Z6 326 aa5.77□□□□□ -1.49
CD44-236ENST00000533222 EFCAB5A4FU69 1503 aa5.77□□□□□ -1.49
CD44-236ENST00000533222 AQRO60306 1485 aaKnown RBP eCLIP5.77□□□□□ -1.49
CD44-236ENST00000533222 PTPRTO14522 1441 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 SH3PXD2BA1X283 911 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 MAGEB16A2A368 324 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 SNTNA6NMZ2 147 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 STX16-NPEPL1H3BU86 382 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 KPNA5O15131 536 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 AP5Z1O43299 807 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 JRKO75564 520 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 RETP07949 1114 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 TMEM253P0C7T8 217 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 CYP2C8P10632 490 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 CHRNB1P11230 501 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 PFKLP17858 780 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 SLC9A1P19634 815 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 HOXA6P31267 233 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 PHBP35232 272 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 ADCYAP1R1P41586 468 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 SLC1A1P43005 524 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 HSD17B4P51659 736 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 LIMK1P53667 647 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 PLTPP55058 493 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 MLLT6P55198 1093 aaPredicted RBP5.76□□□□□ -1.49
CD44-236ENST00000533222 ITGA1P56199 1179 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 POLE2P56282 527 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 RPP38P78345 283 aaKnown RBP5.76□□□□□ -1.49
CD44-236ENST00000533222 FOXO4P98177 505 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 CD83Q01151 205 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 RELAQ04206 551 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 KLHL30Q0D2K2 578 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 ITIH4Q14624 930 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 RTP5Q14D33 572 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 PSMD6Q15008 389 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 TARBP2Q15633 366 aaKnown RBP5.76□□□□□ -1.49
CD44-236ENST00000533222 Q3ZCU0 254 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 ACCSLQ4AC99 568 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 TDRD12Q587J7 1177 aaKnown RBP5.76□□□□□ -1.49
CD44-236ENST00000533222 CATSPEREQ5SY80 951 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 MAP3K21Q5TCX8 1036 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 CD276Q5ZPR3 534 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 KANK2Q63ZY3 851 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 LMBRD2Q68DH5 695 aaPredicted RBP5.76□□□□□ -1.49
CD44-236ENST00000533222 SWSAP1Q6NVH7 229 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 TATDN1Q6P1N9 297 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 SHQ1Q6PI26 577 aaKnown RBP5.76□□□□□ -1.49
CD44-236ENST00000533222 DHRS4L2Q6PKH6 230 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 TOGARAM2Q6ZUX3 1019 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 LHFPL2Q6ZUX7 228 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 KRT26Q7Z3Y9 468 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 NET1Q7Z628 596 aaPredicted RBP5.76□□□□□ -1.49
CD44-236ENST00000533222 ADCK1Q86TW2 530 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 FAM83AQ86UY5 434 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 ANKLE2Q86XL3 938 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 ZNF677Q86XU0 584 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 CD302Q8IX05 232 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 IFT20Q8IY31 132 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.76□□□□□ -1.49
CD44-236ENST00000533222 ZBED8Q8IZ13 594 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 LIX1Q8N485 282 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 AFAP1L2Q8N4X5 818 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 ATP6V0D2Q8N8Y2 350 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 OSCP1Q8WVF1 389 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 RUFY2Q8WXA3 655 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 JDP2Q8WYK2 163 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 HERVK_113Q902F9 699 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 DLG3Q92796 817 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 EME1Q96AY2 570 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 FAM136AQ96C01 138 aa5.76□□□□□ -1.49
CD44-236ENST00000533222 DHX58Q96C10 678 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms