RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 FAM183BPQ6ZVS7 135 aa12.54□□□□□ -0.4
SSBP3-214ENST00000533209 BEND5Q7L4P6 421 aa12.54□□□□□ -0.4
SSBP3-214ENST00000533209 ERICH1Q86X53 443 aa12.54□□□□□ -0.4
SSBP3-214ENST00000533209 XYLT1Q86Y38 959 aa12.54□□□□□ -0.4
SSBP3-214ENST00000533209 RNF139Q8WU17 664 aa12.54□□□□□ -0.4
SSBP3-214ENST00000533209 SYN2Q92777 582 aaPredicted RBP12.54□□□□□ -0.4
SSBP3-214ENST00000533209 GOLGA1Q92805 767 aa12.54□□□□□ -0.4
SSBP3-214ENST00000533209 EBF3Q9H4W6 596 aa12.54□□□□□ -0.4
SSBP3-214ENST00000533209 SYNCQ9H7C4 482 aa12.54□□□□□ -0.4
SSBP3-214ENST00000533209 ARHGEF3Q9NR81 526 aa12.54□□□□□ -0.4
SSBP3-214ENST00000533209 HEBP1Q9NRV9 189 aa12.54□□□□□ -0.4
SSBP3-214ENST00000533209 ASNSD1Q9NWL6 643 aa12.54□□□□□ -0.4
SSBP3-214ENST00000533209 DUS2Q9NX74 493 aaKnown RBP12.54□□□□□ -0.4
SSBP3-214ENST00000533209 GTSE1Q9NYZ3 720 aa12.54□□□□□ -0.4
SSBP3-214ENST00000533209 STRIP2Q9ULQ0 834 aa12.54□□□□□ -0.4
SSBP3-214ENST00000533209 NAALADL1Q9UQQ1 740 aa12.54□□□□□ -0.4
SSBP3-214ENST00000533209 LUC7L2Q9Y383 392 aaKnown RBP12.54□□□□□ -0.4
SSBP3-214ENST00000533209 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.54□□□□□ -0.4
SSBP3-214ENST00000533209 KIF26AQ9ULI4 1882 aaPredicted RBP12.53□□□□□ -0.4
SSBP3-214ENST00000533209 SLC12A8A0AV02 714 aa12.53□□□□□ -0.4
SSBP3-214ENST00000533209 OTOL1A6NHN0 477 aaPredicted RBP12.53□□□□□ -0.4
SSBP3-214ENST00000533209 STC2O76061 302 aa12.53□□□□□ -0.4
SSBP3-214ENST00000533209 GLI1P08151 1106 aa12.53□□□□□ -0.4
SSBP3-214ENST00000533209 SKILP12757 684 aa12.53□□□□□ -0.4
SSBP3-214ENST00000533209 MMP8P22894 467 aa12.53□□□□□ -0.4
SSBP3-214ENST00000533209 CASP14P31944 242 aa12.53□□□□□ -0.4
SSBP3-214ENST00000533209 IFNAR2P48551 515 aa12.53□□□□□ -0.4
SSBP3-214ENST00000533209 STARD6P59095 220 aa12.53□□□□□ -0.4
SSBP3-214ENST00000533209 YWHAZP63104 245 aaKnown RBP12.53□□□□□ -0.4
SSBP3-214ENST00000533209 COG7P83436 770 aa12.53□□□□□ -0.4
SSBP3-214ENST00000533209 SLC6A3Q01959 620 aa12.53□□□□□ -0.4
SSBP3-214ENST00000533209 CENPCQ03188 943 aa12.53□□□□□ -0.4
SSBP3-214ENST00000533209 PRKCQQ04759 706 aa12.53□□□□□ -0.4
SSBP3-214ENST00000533209 GOLGA8FQ08AF8 430 aa12.53□□□□□ -0.4
SSBP3-214ENST00000533209 GOLGA8DPQ0D2H9 430 aa12.53□□□□□ -0.4
SSBP3-214ENST00000533209 RUNX3Q13761 415 aa12.53□□□□□ -0.4
SSBP3-214ENST00000533209 ITPRIPL2Q3MIP1 535 aa12.53□□□□□ -0.4
SSBP3-214ENST00000533209 C2CD6Q53TS8 623 aa12.53□□□□□ -0.4
SSBP3-214ENST00000533209 EFHC1Q5JVL4 640 aa12.53□□□□□ -0.4
SSBP3-214ENST00000533209 SYPL2Q5VXT5 272 aa12.53□□□□□ -0.4
SSBP3-214ENST00000533209 HGSNATQ68CP4 663 aa12.53□□□□□ -0.4
SSBP3-214ENST00000533209 Q6ZNB5 142 aa12.53□□□□□ -0.4
SSBP3-214ENST00000533209 HTR3DQ70Z44 454 aa12.53□□□□□ -0.4
SSBP3-214ENST00000533209 SLC26A9Q7LBE3 791 aa12.53□□□□□ -0.4
SSBP3-214ENST00000533209 ZNF571Q7Z3V5 609 aaPredicted RBP12.53□□□□□ -0.4
SSBP3-214ENST00000533209 BMP8AQ7Z5Y6 402 aa12.53□□□□□ -0.4
SSBP3-214ENST00000533209 ZNF397Q8NF99 534 aaPredicted RBP12.53□□□□□ -0.4
SSBP3-214ENST00000533209 SLC30A5Q8TAD4 765 aa12.53□□□□□ -0.4
SSBP3-214ENST00000533209 TTC8Q8TAM2 541 aa12.53□□□□□ -0.4
SSBP3-214ENST00000533209 CSGALNACT1Q8TDX6 532 aa12.53□□□□□ -0.4
SSBP3-214ENST00000533209 DQX1Q8TE96 717 aaKnown RBP12.53□□□□□ -0.4
SSBP3-214ENST00000533209 C18orf8Q96DM3 657 aa12.53□□□□□ -0.4
SSBP3-214ENST00000533209 SLC2A13Q96QE2 648 aa12.53□□□□□ -0.4
SSBP3-214ENST00000533209 ANP32EQ9BTT0 268 aa12.53□□□□□ -0.4
SSBP3-214ENST00000533209 DDX23Q9BUQ8 820 aaKnown RBP12.53□□□□□ -0.4
SSBP3-214ENST00000533209 C1QTNF1Q9BXJ1 281 aa12.53□□□□□ -0.4
SSBP3-214ENST00000533209 TRIM5Q9C035 493 aa12.53□□□□□ -0.4
SSBP3-214ENST00000533209 NUCKS1Q9H1E3 243 aaKnown RBP12.53□□□□□ -0.4
SSBP3-214ENST00000533209 HAUS4Q9H6D7 363 aa12.53□□□□□ -0.4
SSBP3-214ENST00000533209 POPDC2Q9HBU9 364 aa12.53□□□□□ -0.4
SSBP3-214ENST00000533209 SFMBT1Q9UHJ3 866 aa12.53□□□□□ -0.4
SSBP3-214ENST00000533209 SH3BP1Q9Y3L3 701 aa12.53□□□□□ -0.4
SSBP3-214ENST00000533209 COL4A2P08572 1712 aa12.52□□□□□ -0.41
SSBP3-214ENST00000533209 SLC9A3R1O14745 358 aaPredicted RBP12.52□□□□□ -0.41
SSBP3-214ENST00000533209 MSI1O43347 362 aaKnown RBP12.52□□□□□ -0.41
SSBP3-214ENST00000533209 HSF2BPO75031 334 aa12.52□□□□□ -0.41
SSBP3-214ENST00000533209 GRAP2O75791 330 aa12.52□□□□□ -0.41
SSBP3-214ENST00000533209 KLKB1P03952 638 aa12.52□□□□□ -0.41
SSBP3-214ENST00000533209 HMBSP08397 361 aa12.52□□□□□ -0.41
SSBP3-214ENST00000533209 NCAM1P13591 858 aa12.52□□□□□ -0.41
SSBP3-214ENST00000533209 TNFAIP3P21580 790 aa12.52□□□□□ -0.41
SSBP3-214ENST00000533209 SCNN1AP37088 669 aa12.52□□□□□ -0.41
SSBP3-214ENST00000533209 SOX9P48436 509 aa12.52□□□□□ -0.41
SSBP3-214ENST00000533209 MLLT6P55198 1093 aaPredicted RBP12.52□□□□□ -0.41
SSBP3-214ENST00000533209 KLHL30Q0D2K2 578 aa12.52□□□□□ -0.41
SSBP3-214ENST00000533209 PTP4A2Q12974 167 aa12.52□□□□□ -0.41
SSBP3-214ENST00000533209 TRIM14Q14142 442 aa12.52□□□□□ -0.41
SSBP3-214ENST00000533209 TMEM31Q5JXX7 168 aa12.52□□□□□ -0.41
SSBP3-214ENST00000533209 MMS22LQ6ZRQ5 1243 aa12.52□□□□□ -0.41
SSBP3-214ENST00000533209 TPRG1Q6ZUI0 275 aa12.52□□□□□ -0.41
SSBP3-214ENST00000533209 TOGARAM2Q6ZUX3 1019 aa12.52□□□□□ -0.41
SSBP3-214ENST00000533209 ZDHHC17Q8IUH5 632 aa12.52□□□□□ -0.41
SSBP3-214ENST00000533209 BBS7Q8IWZ6 715 aa12.52□□□□□ -0.41
SSBP3-214ENST00000533209 ADGRG2Q8IZP9 1017 aa12.52□□□□□ -0.41
SSBP3-214ENST00000533209 MSANTD4Q8NCY6 345 aa12.52□□□□□ -0.41
SSBP3-214ENST00000533209 ATP2A3Q93084 1043 aa12.52□□□□□ -0.41
SSBP3-214ENST00000533209 PBXIP1Q96AQ6 731 aa12.52□□□□□ -0.41
SSBP3-214ENST00000533209 TRIM62Q9BVG3 475 aa12.52□□□□□ -0.41
SSBP3-214ENST00000533209 ECT2Q9H8V3 914 aa12.52□□□□□ -0.41
SSBP3-214ENST00000533209 TBC1D17Q9HA65 648 aa12.52□□□□□ -0.41
SSBP3-214ENST00000533209 SEPT11Q9NVA2 429 aaKnown RBP12.52□□□□□ -0.41
SSBP3-214ENST00000533209 TBC1D14Q9P2M4 693 aa12.52□□□□□ -0.41
SSBP3-214ENST00000533209 LSM7Q9UK45 103 aaKnown RBP12.52□□□□□ -0.41
SSBP3-214ENST00000533209 HBS1LQ9Y450 684 aaKnown RBP12.52□□□□□ -0.41
SSBP3-214ENST00000533209 PIAS3Q9Y6X2 628 aa12.52□□□□□ -0.41
SSBP3-214ENST00000533209 HELZP42694 1942 aaKnown RBP12.52□□□□□ -0.41
SSBP3-214ENST00000533209 COL4A3Q01955 1670 aa12.51□□□□□ -0.41
SSBP3-214ENST00000533209 PRR33A8MZF0 331 aa12.51□□□□□ -0.41
SSBP3-214ENST00000533209 SPECC1L-ADORA2AF8WAN1 911 aa12.51□□□□□ -0.41
SSBP3-214ENST00000533209 DDX3XO00571 662 aaKnown RBP eCLIP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms