RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 DDX6P26196 483 aaKnown RBP eCLIP1.86□□□□□ -2.11
KNL1-211ENST00000533001 ETV5P41161 510 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 TUBP50607 506 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 JAK3P52333 1124 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 NXPH1P58417 271 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 DLG4P78352 724 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 PFKPQ01813 784 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 OS9Q13438 667 aaPredicted RBP1.86□□□□□ -2.11
KNL1-211ENST00000533001 LY6DQ14210 128 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 MXD4Q14582 209 aaPredicted RBP1.86□□□□□ -2.11
KNL1-211ENST00000533001 TRIP4Q15650 581 aaPredicted RBP1.86□□□□□ -2.11
KNL1-211ENST00000533001 DDR2Q16832 855 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 HLA-BQ31612 363 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 BRDTQ58F21 947 aaPredicted RBP1.86□□□□□ -2.11
KNL1-211ENST00000533001 RNF20Q5VTR2 975 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 AGBL4Q5VU57 503 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 JADE1Q6IE81 842 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 GCNT7Q6ZNI0 430 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 ANKS3Q6ZW76 656 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 PRIMA1Q86XR5 153 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 CNNM3Q8NE01 707 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 SCFD1Q8WVM8 642 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 FUBP3Q96I24 572 aaKnown RBP eCLIP1.86□□□□□ -2.11
KNL1-211ENST00000533001 FAM167AQ96KS9 214 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 WDR24Q96S15 920 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 ACBD6Q9BR61 282 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 GCOM2Q9BZD3 368 aaPredicted RBP1.86□□□□□ -2.11
KNL1-211ENST00000533001 FBXO2Q9UK22 296 aaPredicted RBP1.86□□□□□ -2.11
KNL1-211ENST00000533001 NAALADL1Q9UQQ1 740 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 INPP5FQ9Y2H2 1132 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 E2F3O00716 465 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 ZBTB43O43298 467 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 HMMRO75330 724 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 MCF2P10911 925 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 MYF5P13349 255 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 ASPAP45381 313 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 MRPL12P52815 198 aaKnown RBP1.86□□□□□ -2.11
KNL1-211ENST00000533001 PFN3P60673 137 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 NFKB2Q00653 900 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 IMMTQ16891 758 aaKnown RBP1.86□□□□□ -2.11
KNL1-211ENST00000533001 ARHGAP29Q52LW3 1261 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 DHRS13Q6UX07 377 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 RABEPKQ7Z6M1 372 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 ABI1Q8IZP0 508 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 ARL14EPQ8N8R7 260 aaPredicted RBP1.86□□□□□ -2.11
KNL1-211ENST00000533001 SLC38A9Q8NBW4 561 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 TTC8Q8TAM2 541 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 TTC17Q96AE7 1141 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 NAF1Q96HR8 494 aaKnown RBP1.86□□□□□ -2.11
KNL1-211ENST00000533001 CORO1BQ9BR76 489 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 REEP2Q9BRK0 252 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 RSPH9Q9H1X1 276 aaPredicted RBP1.86□□□□□ -2.11
KNL1-211ENST00000533001 TMEM206Q9H813 350 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 STK39Q9UEW8 545 aa1.86□□□□□ -2.11
KNL1-211ENST00000533001 CDV3Q9UKY7 258 aaKnown RBP1.86□□□□□ -2.11
KNL1-211ENST00000533001 DYNC1H1Q14204 4646 aaKnown RBP1.86□□□□□ -2.11
KNL1-211ENST00000533001 ERVH48-1M5A8F1 160 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 ADAM10O14672 748 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 TFE3P19532 575 aaPredicted RBP1.85□□□□□ -2.11
KNL1-211ENST00000533001 DRD1P21728 446 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 GRIK1P39086 918 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 MRPS21P82921 87 aaKnown RBP1.85□□□□□ -2.11
KNL1-211ENST00000533001 DRAP1Q14919 205 aaPredicted RBP1.85□□□□□ -2.11
KNL1-211ENST00000533001 CDKN3Q16667 212 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 INTS6LQ5JSJ4 861 aaKnown RBP1.85□□□□□ -2.11
KNL1-211ENST00000533001 PPP1R26Q5T8A7 1209 aaPredicted RBP1.85□□□□□ -2.11
KNL1-211ENST00000533001 CLEC20AQ6ZU45 233 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 TXNDC5Q8NBS9 432 aaKnown RBP1.85□□□□□ -2.11
KNL1-211ENST00000533001 CEP170P1Q96L14 293 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 ZNF518BQ9C0D4 1074 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 DNAI2Q9GZS0 605 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 TCEAL2Q9H3H9 227 aaPredicted RBP1.85□□□□□ -2.11
KNL1-211ENST00000533001 TM9SF3Q9HD45 589 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 MTPAPQ9NVV4 582 aaKnown RBP eCLIP1.85□□□□□ -2.11
KNL1-211ENST00000533001 LRFN2Q9ULH4 789 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 MRPS23Q9Y3D9 190 aaKnown RBP1.85□□□□□ -2.11
KNL1-211ENST00000533001 BECN2A8MW95 431 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 LEFTY2O00292 366 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 BRINP1O60477 761 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 CNOT3O75175 753 aaKnown RBP1.85□□□□□ -2.11
KNL1-211ENST00000533001 EML2O95834 649 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 TGM2P21980 687 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 MZF1P28698 734 aaPredicted RBP1.85□□□□□ -2.11
KNL1-211ENST00000533001 NRLP54845 237 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 PPP3CAQ08209 521 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 PKP1Q13835 747 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 TRIP6Q15654 476 aaKnown RBP1.85□□□□□ -2.11
KNL1-211ENST00000533001 ZNF385CQ66K41 422 aaPredicted RBP1.85□□□□□ -2.11
KNL1-211ENST00000533001 CATSPER4Q7RTX7 472 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 BRSK2Q8IWQ3 736 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 KCTD17Q8N5Z5 321 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 LRRC52Q8N7C0 313 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 C12orf29Q8N999 325 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 TFAP2BQ92481 460 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 SCARF2Q96GP6 870 aaPredicted RBP1.85□□□□□ -2.11
KNL1-211ENST00000533001 C1QTNF2Q9BXJ5 285 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 KRTAP4-5Q9BYR2 181 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 TUFT1Q9NNX1 390 aa1.85□□□□□ -2.11
KNL1-211ENST00000533001 PUF60Q9UHX1 559 aaKnown RBP1.85□□□□□ -2.11
KNL1-211ENST00000533001 ASB3Q9Y575 518 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms