RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 KCNV2Q8TDN2 545 aa18.01■□□□□ 0.47
RPUSD4-207ENST00000532800 BHMTQ93088 406 aa18.01■□□□□ 0.47
RPUSD4-207ENST00000532800 P2RY11Q96G91 374 aa18.01■□□□□ 0.47
RPUSD4-207ENST00000532800 IMPG2Q9BZV3 1241 aa18.01■□□□□ 0.47
RPUSD4-207ENST00000532800 NIF3L1Q9GZT8 377 aa18.01■□□□□ 0.47
RPUSD4-207ENST00000532800 FSCN3Q9NQT6 498 aa18.01■□□□□ 0.47
RPUSD4-207ENST00000532800 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.01■□□□□ 0.47
RPUSD4-207ENST00000532800 CALCOCO1Q9P1Z2 691 aa18.01■□□□□ 0.47
RPUSD4-207ENST00000532800 EVLQ9UI08 416 aaPredicted RBP18.01■□□□□ 0.47
RPUSD4-207ENST00000532800 LSM7Q9UK45 103 aaKnown RBP18.01■□□□□ 0.47
RPUSD4-207ENST00000532800 ADAMTS9Q9P2N4 1935 aa18.01■□□□□ 0.47
RPUSD4-207ENST00000532800 PRRT4C9JH25 899 aa18■□□□□ 0.47
RPUSD4-207ENST00000532800 CILPO75339 1184 aa18■□□□□ 0.47
RPUSD4-207ENST00000532800 ITPKAP23677 461 aa18■□□□□ 0.47
RPUSD4-207ENST00000532800 NTSR1P30989 418 aa18■□□□□ 0.47
RPUSD4-207ENST00000532800 MAPK8P45983 427 aa18■□□□□ 0.47
RPUSD4-207ENST00000532800 NFIL3Q16649 462 aa18■□□□□ 0.47
RPUSD4-207ENST00000532800 PPP1R26Q5T8A7 1209 aaPredicted RBP18■□□□□ 0.47
RPUSD4-207ENST00000532800 LYSMD4Q5XG99 296 aa18■□□□□ 0.47
RPUSD4-207ENST00000532800 KIAA1211LQ6NV74 962 aa18■□□□□ 0.47
RPUSD4-207ENST00000532800 INTS8Q75QN2 995 aaKnown RBP18■□□□□ 0.47
RPUSD4-207ENST00000532800 SCD5Q86SK9 330 aa18■□□□□ 0.47
RPUSD4-207ENST00000532800 SYT12Q8IV01 421 aa18■□□□□ 0.47
RPUSD4-207ENST00000532800 CYP3A43Q9HB55 503 aa18■□□□□ 0.47
RPUSD4-207ENST00000532800 CD248Q9HCU0 757 aa18■□□□□ 0.47
RPUSD4-207ENST00000532800 MARK1Q9P0L2 795 aa18■□□□□ 0.47
RPUSD4-207ENST00000532800 STARD13Q9Y3M8 1113 aa18■□□□□ 0.47
RPUSD4-207ENST00000532800 PCDHA5Q9Y5H7 936 aa18■□□□□ 0.47
RPUSD4-207ENST00000532800 FAM237AA0A1B0GTK4 181 aa17.99■□□□□ 0.47
RPUSD4-207ENST00000532800 KIF20AO95235 890 aa17.99■□□□□ 0.47
RPUSD4-207ENST00000532800 KRT13P13646 458 aa17.99■□□□□ 0.47
RPUSD4-207ENST00000532800 TRIM21P19474 475 aaKnown RBP17.99■□□□□ 0.47
RPUSD4-207ENST00000532800 KIF11P52732 1056 aa17.99■□□□□ 0.47
RPUSD4-207ENST00000532800 KRT85P78386 507 aa17.99■□□□□ 0.47
RPUSD4-207ENST00000532800 GOLGA8FQ08AF8 430 aa17.99■□□□□ 0.47
RPUSD4-207ENST00000532800 GOLGA8DPQ0D2H9 430 aa17.99■□□□□ 0.47
RPUSD4-207ENST00000532800 FOXC1Q12948 553 aa17.99■□□□□ 0.47
RPUSD4-207ENST00000532800 BYSLQ13895 437 aaKnown RBP17.99■□□□□ 0.47
RPUSD4-207ENST00000532800 ZNF394Q53GI3 561 aa17.99■□□□□ 0.47
RPUSD4-207ENST00000532800 C10orf120Q5SQS8 335 aa17.99■□□□□ 0.47
RPUSD4-207ENST00000532800 Q6ZNB5 142 aa17.99■□□□□ 0.47
RPUSD4-207ENST00000532800 NUDT18Q6ZVK8 323 aa17.99■□□□□ 0.47
RPUSD4-207ENST00000532800 CHPFQ8IZ52 775 aa17.99■□□□□ 0.47
RPUSD4-207ENST00000532800 XPO6Q96QU8 1125 aaKnown RBP17.99■□□□□ 0.47
RPUSD4-207ENST00000532800 NUSAP1Q9BXS6 441 aaKnown RBP17.99■□□□□ 0.47
RPUSD4-207ENST00000532800 GOLPH3LQ9H4A5 285 aa17.99■□□□□ 0.47
RPUSD4-207ENST00000532800 PNPLA8Q9NP80 782 aa17.99■□□□□ 0.47
RPUSD4-207ENST00000532800 CD93Q9NPY3 652 aa17.99■□□□□ 0.47
RPUSD4-207ENST00000532800 PLK2Q9NYY3 685 aa17.99■□□□□ 0.47
RPUSD4-207ENST00000532800 DNMT3LQ9UJW3 386 aa17.99■□□□□ 0.47
RPUSD4-207ENST00000532800 NAGPAQ9UK23 515 aa17.99■□□□□ 0.47
RPUSD4-207ENST00000532800 PILRBQ9UKJ0 227 aa17.99■□□□□ 0.47
RPUSD4-207ENST00000532800 RAD54BQ9Y620 910 aa17.99■□□□□ 0.47
RPUSD4-207ENST00000532800 STC2O76061 302 aa17.98■□□□□ 0.47
RPUSD4-207ENST00000532800 ENGP17813 658 aa17.98■□□□□ 0.47
RPUSD4-207ENST00000532800 NDUFV2P19404 249 aa17.98■□□□□ 0.47
RPUSD4-207ENST00000532800 SPINK2P20155 84 aa17.98■□□□□ 0.47
RPUSD4-207ENST00000532800 RPL6Q02878 288 aaKnown RBP17.98■□□□□ 0.47
RPUSD4-207ENST00000532800 LMAN2Q12907 356 aa17.98■□□□□ 0.47
RPUSD4-207ENST00000532800 ZCWPW2Q504Y3 356 aa17.98■□□□□ 0.47
RPUSD4-207ENST00000532800 PEAR1Q5VY43 1037 aaPredicted RBP17.98■□□□□ 0.47
RPUSD4-207ENST00000532800 KLHDC10Q6PID8 442 aa17.98■□□□□ 0.47
RPUSD4-207ENST00000532800 CCDC186Q7Z3E2 898 aa17.98■□□□□ 0.47
RPUSD4-207ENST00000532800 GUF1Q8N442 669 aaKnown RBP17.98■□□□□ 0.47
RPUSD4-207ENST00000532800 DEFB124Q8NES8 71 aa17.98■□□□□ 0.47
RPUSD4-207ENST00000532800 IPO4Q8TEX9 1081 aaKnown RBP17.98■□□□□ 0.47
RPUSD4-207ENST00000532800 SEMA4DQ92854 862 aa17.98■□□□□ 0.47
RPUSD4-207ENST00000532800 CCDC47Q96A33 483 aaKnown RBP17.98■□□□□ 0.47
RPUSD4-207ENST00000532800 EEF2KMTQ96G04 330 aa17.98■□□□□ 0.47
RPUSD4-207ENST00000532800 DUSP16Q9BY84 665 aa17.98■□□□□ 0.47
RPUSD4-207ENST00000532800 SLC6A17Q9H1V8 727 aa17.98■□□□□ 0.47
RPUSD4-207ENST00000532800 TMEM8AQ9HCN3 771 aa17.98■□□□□ 0.47
RPUSD4-207ENST00000532800 CACNA2D2Q9NY47 1150 aa17.98■□□□□ 0.47
RPUSD4-207ENST00000532800 WDR35Q9P2L0 1181 aa17.98■□□□□ 0.47
RPUSD4-207ENST00000532800 PCDH15Q96QU1 1955 aa17.97■□□□□ 0.47
RPUSD4-207ENST00000532800 IGHV1OR15-9A0A0B4J2B8 117 aa17.97■□□□□ 0.47
RPUSD4-207ENST00000532800 AP5Z1O43299 807 aa17.97■□□□□ 0.47
RPUSD4-207ENST00000532800 TOP3BO95985 862 aaKnown RBP17.97■□□□□ 0.47
RPUSD4-207ENST00000532800 KLKB1P03952 638 aa17.97■□□□□ 0.47
RPUSD4-207ENST00000532800 CFIP05156 583 aa17.97■□□□□ 0.47
RPUSD4-207ENST00000532800 CISD3P0C7P0 127 aa17.97■□□□□ 0.47
RPUSD4-207ENST00000532800 CSRP1P21291 193 aaKnown RBP17.97■□□□□ 0.47
RPUSD4-207ENST00000532800 PSMC2P35998 433 aaKnown RBP17.97■□□□□ 0.47
RPUSD4-207ENST00000532800 PLA2G4AP47712 749 aa17.97■□□□□ 0.47
RPUSD4-207ENST00000532800 DGKGP49619 791 aa17.97■□□□□ 0.47
RPUSD4-207ENST00000532800 ADAM9Q13443 819 aa17.97■□□□□ 0.47
RPUSD4-207ENST00000532800 SPDYCQ5MJ68 293 aa17.97■□□□□ 0.47
RPUSD4-207ENST00000532800 SLC23A3Q6PIS1 610 aa17.97■□□□□ 0.47
RPUSD4-207ENST00000532800 KRBA2Q6ZNG9 492 aa17.97■□□□□ 0.47
RPUSD4-207ENST00000532800 SMYD4Q8IYR2 804 aaPredicted RBP17.97■□□□□ 0.47
RPUSD4-207ENST00000532800 ARID3AQ99856 593 aa17.97■□□□□ 0.47
RPUSD4-207ENST00000532800 GABRG3Q99928 467 aa17.97■□□□□ 0.47
RPUSD4-207ENST00000532800 RASAL2Q9UJF2 1139 aa17.97■□□□□ 0.47
RPUSD4-207ENST00000532800 CYP8B1Q9UNU6 501 aa17.97■□□□□ 0.47
RPUSD4-207ENST00000532800 WASF3Q9UPY6 502 aa17.97■□□□□ 0.47
RPUSD4-207ENST00000532800 USP3Q9Y6I4 520 aa17.97■□□□□ 0.47
RPUSD4-207ENST00000532800 WASH3PC4AMC7 463 aa17.96■□□□□ 0.47
RPUSD4-207ENST00000532800 HMBSP08397 361 aa17.96■□□□□ 0.47
RPUSD4-207ENST00000532800 CEACAM1P13688 526 aa17.96■□□□□ 0.47
RPUSD4-207ENST00000532800 RPL13P26373 211 aaKnown RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms