RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 PDE1CQ14123 709 aaPredicted RBP15.79■□□□□ 0.12
PCDHA3-202ENST00000532566 CNGA3Q16281 694 aa15.79■□□□□ 0.12
PCDHA3-202ENST00000532566 POLNQ7Z5Q5 900 aa15.79■□□□□ 0.12
PCDHA3-202ENST00000532566 LRRC43Q8N309 656 aa15.79■□□□□ 0.12
PCDHA3-202ENST00000532566 PBXIP1Q96AQ6 731 aa15.79■□□□□ 0.12
PCDHA3-202ENST00000532566 APOPT1Q96IL0 206 aa15.79■□□□□ 0.12
PCDHA3-202ENST00000532566 TMEM120AQ9BXJ8 343 aa15.79■□□□□ 0.12
PCDHA3-202ENST00000532566 ING2Q9H160 280 aa15.79■□□□□ 0.12
PCDHA3-202ENST00000532566 C10orf88Q9H8K7 445 aa15.79■□□□□ 0.12
PCDHA3-202ENST00000532566 IARS2Q9NSE4 1012 aaKnown RBP15.79■□□□□ 0.12
PCDHA3-202ENST00000532566 DMAC2Q9NW81 257 aa15.79■□□□□ 0.12
PCDHA3-202ENST00000532566 VANGL2Q9ULK5 521 aa15.79■□□□□ 0.12
PCDHA3-202ENST00000532566 RASSF10A6NK89 507 aa15.79■□□□□ 0.12
PCDHA3-202ENST00000532566 PRRG1O14668 218 aa15.79■□□□□ 0.12
PCDHA3-202ENST00000532566 FARP2O94887 1054 aaPredicted RBP15.79■□□□□ 0.12
PCDHA3-202ENST00000532566 AGAP9Q5VTM2 703 aa15.79■□□□□ 0.12
PCDHA3-202ENST00000532566 BBS12Q6ZW61 710 aa15.79■□□□□ 0.12
PCDHA3-202ENST00000532566 USP50Q70EL3 339 aaPredicted RBP15.79■□□□□ 0.12
PCDHA3-202ENST00000532566 LRRC57Q8N9N7 239 aa15.79■□□□□ 0.12
PCDHA3-202ENST00000532566 HASPINQ8TF76 798 aa15.79■□□□□ 0.12
PCDHA3-202ENST00000532566 BSNDQ8WZ55 320 aa15.79■□□□□ 0.12
PCDHA3-202ENST00000532566 LRRC39Q96DD0 335 aa15.79■□□□□ 0.12
PCDHA3-202ENST00000532566 COLEC11Q9BWP8 271 aa15.79■□□□□ 0.12
PCDHA3-202ENST00000532566 CEP41Q9BYV8 373 aa15.79■□□□□ 0.12
PCDHA3-202ENST00000532566 UBE2OQ9C0C9 1292 aaKnown RBP15.79■□□□□ 0.12
PCDHA3-202ENST00000532566 ARHGAP28Q9P2N2 729 aa15.79■□□□□ 0.12
PCDHA3-202ENST00000532566 ARHGAP26Q9UNA1 814 aa15.79■□□□□ 0.12
PCDHA3-202ENST00000532566 DNAJC16Q9Y2G8 782 aa15.79■□□□□ 0.12
PCDHA3-202ENST00000532566 STMN1P16949 149 aa15.78■□□□□ 0.12
PCDHA3-202ENST00000532566 CALB2P22676 271 aa15.78■□□□□ 0.12
PCDHA3-202ENST00000532566 PSEN2P49810 448 aa15.78■□□□□ 0.12
PCDHA3-202ENST00000532566 ARHGDIAP52565 204 aa15.78■□□□□ 0.12
PCDHA3-202ENST00000532566 DAB2IPQ5VWQ8 1189 aa15.78■□□□□ 0.12
PCDHA3-202ENST00000532566 EDEM1Q92611 657 aa15.78■□□□□ 0.12
PCDHA3-202ENST00000532566 FBXO32Q969P5 355 aa15.78■□□□□ 0.12
PCDHA3-202ENST00000532566 SHCBP1LQ9BZQ2 653 aa15.78■□□□□ 0.12
PCDHA3-202ENST00000532566 SETD1AO15047 1707 aaKnown RBP15.78■□□□□ 0.12
PCDHA3-202ENST00000532566 ETS1P14921 441 aa15.78■□□□□ 0.12
PCDHA3-202ENST00000532566 TAS2R40P59535 323 aa15.78■□□□□ 0.12
PCDHA3-202ENST00000532566 MRNIPQ6NTE8 343 aa15.78■□□□□ 0.12
PCDHA3-202ENST00000532566 UNC45BQ8IWX7 931 aa15.78■□□□□ 0.12
PCDHA3-202ENST00000532566 ALLCQ8N6M5 410 aa15.78■□□□□ 0.12
PCDHA3-202ENST00000532566 MTMR14Q8NCE2 650 aa15.78■□□□□ 0.12
PCDHA3-202ENST00000532566 HELQQ8TDG4 1101 aa15.78■□□□□ 0.12
PCDHA3-202ENST00000532566 OLFM3Q96PB7 478 aa15.78■□□□□ 0.12
PCDHA3-202ENST00000532566 TRPC5OSA6NMA1 111 aa15.78■□□□□ 0.12
PCDHA3-202ENST00000532566 DDX3YO15523 660 aaKnown RBP15.78■□□□□ 0.12
PCDHA3-202ENST00000532566 CPA3P15088 417 aa15.78■□□□□ 0.12
PCDHA3-202ENST00000532566 GP5P40197 560 aa15.78■□□□□ 0.12
PCDHA3-202ENST00000532566 CAPRIN1Q14444 709 aaKnown RBP15.78■□□□□ 0.12
PCDHA3-202ENST00000532566 RASA2Q15283 850 aa15.78■□□□□ 0.12
PCDHA3-202ENST00000532566 OVOS1Q6IE37 1185 aa15.78■□□□□ 0.12
PCDHA3-202ENST00000532566 CLEC4DQ8WXI8 215 aa15.78■□□□□ 0.12
PCDHA3-202ENST00000532566 SHISA4Q96DD7 197 aa15.78■□□□□ 0.12
PCDHA3-202ENST00000532566 C2CD2Q9Y426 696 aa15.78■□□□□ 0.12
PCDHA3-202ENST00000532566 KCNK1O00180 336 aa15.78■□□□□ 0.12
PCDHA3-202ENST00000532566 RPL10AP62906 217 aaKnown RBP15.78■□□□□ 0.12
PCDHA3-202ENST00000532566 PALB2Q86YC2 1186 aa15.78■□□□□ 0.12
PCDHA3-202ENST00000532566 PCSK9Q8NBP7 692 aaKnown RBP15.78■□□□□ 0.12
PCDHA3-202ENST00000532566 ZSWIM2Q8NEG5 633 aa15.78■□□□□ 0.12
PCDHA3-202ENST00000532566 RMDN2Q96LZ7 410 aa15.78■□□□□ 0.12
PCDHA3-202ENST00000532566 LATS2Q9NRM7 1088 aa15.78■□□□□ 0.12
PCDHA3-202ENST00000532566 AURKCQ9UQB9 309 aa15.78■□□□□ 0.12
PCDHA3-202ENST00000532566 RNF103O00237 685 aa15.77■□□□□ 0.12
PCDHA3-202ENST00000532566 B4GALT5O43286 388 aa15.77■□□□□ 0.12
PCDHA3-202ENST00000532566 LBRQ14739 615 aaKnown RBP15.77■□□□□ 0.12
PCDHA3-202ENST00000532566 SLC51AQ86UW1 340 aa15.77■□□□□ 0.12
PCDHA3-202ENST00000532566 TEX9Q8N6V9 391 aa15.77■□□□□ 0.12
PCDHA3-202ENST00000532566 BLOC1S5Q8TDH9 187 aa15.77■□□□□ 0.12
PCDHA3-202ENST00000532566 LENG9Q96B70 501 aa15.77■□□□□ 0.12
PCDHA3-202ENST00000532566 SRPK1Q96SB4 655 aaKnown RBP15.77■□□□□ 0.12
PCDHA3-202ENST00000532566 TINF2Q9BSI4 451 aa15.77■□□□□ 0.12
PCDHA3-202ENST00000532566 ACOT9Q9Y305 439 aa15.77■□□□□ 0.12
PCDHA3-202ENST00000532566 PCDHB7Q9Y5E2 793 aa15.77■□□□□ 0.12
PCDHA3-202ENST00000532566 ACTL7BQ9Y614 415 aa15.77■□□□□ 0.12
PCDHA3-202ENST00000532566 ATRNL1Q5VV63 1379 aa15.77■□□□□ 0.12
PCDHA3-202ENST00000532566 HACD1B0YJ81 288 aa15.77■□□□□ 0.12
PCDHA3-202ENST00000532566 SUPT3HB4E1H0 165 aa15.77■□□□□ 0.12
PCDHA3-202ENST00000532566 H2AFYO75367 372 aaKnown RBP15.77■□□□□ 0.12
PCDHA3-202ENST00000532566 SUPT3HO75486 399 aa15.77■□□□□ 0.12
PCDHA3-202ENST00000532566 CCDC130P13994 396 aa15.77■□□□□ 0.12
PCDHA3-202ENST00000532566 PTPN4P29074 926 aa15.77■□□□□ 0.12
PCDHA3-202ENST00000532566 SLC11A2P49281 568 aa15.77■□□□□ 0.12
PCDHA3-202ENST00000532566 FAAP100Q0VG06 881 aa15.77■□□□□ 0.12
PCDHA3-202ENST00000532566 MTG1Q9BT17 334 aaPredicted RBP15.77■□□□□ 0.12
PCDHA3-202ENST00000532566 MRPL46Q9H2W6 279 aaKnown RBP15.77■□□□□ 0.12
PCDHA3-202ENST00000532566 ERVK-5Q9HDB9 667 aa15.77■□□□□ 0.12
PCDHA3-202ENST00000532566 CHST12Q9NRB3 414 aa15.77■□□□□ 0.12
PCDHA3-202ENST00000532566 UBP1Q9NZI7 540 aa15.77■□□□□ 0.12
PCDHA3-202ENST00000532566 FAM8A1Q9UBU6 413 aa15.77■□□□□ 0.12
PCDHA3-202ENST00000532566 hCG_1818297A0A087WSY0 165 aa15.77■□□□□ 0.11
PCDHA3-202ENST00000532566 TTC36A6NLP5 189 aa15.77■□□□□ 0.11
PCDHA3-202ENST00000532566 DPYSL4O14531 572 aa15.77■□□□□ 0.11
PCDHA3-202ENST00000532566 ITGAVP06756 1048 aa15.77■□□□□ 0.11
PCDHA3-202ENST00000532566 MMP8P22894 467 aa15.77■□□□□ 0.11
PCDHA3-202ENST00000532566 VHLP40337 213 aa15.77■□□□□ 0.11
PCDHA3-202ENST00000532566 INPP5AQ14642 412 aa15.77■□□□□ 0.11
PCDHA3-202ENST00000532566 NBPF20Q3BBV1 942 aa15.77■□□□□ 0.11
PCDHA3-202ENST00000532566 CKAP2Q8WWK9 683 aa15.77■□□□□ 0.11
PCDHA3-202ENST00000532566 NRCAMQ92823 1304 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms