RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 XPO6Q96QU8 1125 aaKnown RBP17.71■□□□□ 0.43
CPSF1-207ENST00000531727 EDEM2Q9BV94 578 aa17.71■□□□□ 0.43
CPSF1-207ENST00000531727 BBS2Q9BXC9 721 aa17.71■□□□□ 0.43
CPSF1-207ENST00000531727 FAM124BQ9H5Z6 455 aaPredicted RBP17.71■□□□□ 0.43
CPSF1-207ENST00000531727 CLIC5Q9NZA1 410 aa17.71■□□□□ 0.43
CPSF1-207ENST00000531727 WDR35Q9P2L0 1181 aa17.71■□□□□ 0.43
CPSF1-207ENST00000531727 NAGPAQ9UK23 515 aa17.71■□□□□ 0.43
CPSF1-207ENST00000531727 NUDT5Q9UKK9 219 aa17.71■□□□□ 0.43
CPSF1-207ENST00000531727 STARD13Q9Y3M8 1113 aa17.71■□□□□ 0.43
CPSF1-207ENST00000531727 SDK1Q7Z5N4 2213 aa17.71■□□□□ 0.43
CPSF1-207ENST00000531727 TNRC6BQ9UPQ9 1833 aaKnown RBP17.7■□□□□ 0.42
CPSF1-207ENST00000531727 RAD23BP54727 409 aa17.7■□□□□ 0.42
CPSF1-207ENST00000531727 ZNF658Q5TYW1 1059 aaPredicted RBP17.7■□□□□ 0.42
CPSF1-207ENST00000531727 Q6ZNB5 142 aa17.7■□□□□ 0.42
CPSF1-207ENST00000531727 TPGS1Q6ZTW0 290 aa17.7■□□□□ 0.42
CPSF1-207ENST00000531727 SLC4A11Q8NBS3 891 aa17.7■□□□□ 0.42
CPSF1-207ENST00000531727 GSDMAQ96QA5 445 aa17.7■□□□□ 0.42
CPSF1-207ENST00000531727 ARID3AQ99856 593 aa17.7■□□□□ 0.42
CPSF1-207ENST00000531727 HCN2Q9UL51 889 aa17.7■□□□□ 0.42
CPSF1-207ENST00000531727 CIZ1Q9ULV3 898 aaPredicted RBP17.7■□□□□ 0.42
CPSF1-207ENST00000531727 LNP1A1A4G5 178 aa17.69■□□□□ 0.42
CPSF1-207ENST00000531727 KHNYNO15037 678 aaKnown RBP17.69■□□□□ 0.42
CPSF1-207ENST00000531727 SLC16A3O15427 465 aaKnown RBP17.69■□□□□ 0.42
CPSF1-207ENST00000531727 MAP3K13O43283 966 aa17.69■□□□□ 0.42
CPSF1-207ENST00000531727 STC2O76061 302 aa17.69■□□□□ 0.42
CPSF1-207ENST00000531727 RALAP11233 206 aa17.69■□□□□ 0.42
CPSF1-207ENST00000531727 HOXB2P14652 356 aa17.69■□□□□ 0.42
CPSF1-207ENST00000531727 NTSR1P30989 418 aa17.69■□□□□ 0.42
CPSF1-207ENST00000531727 DHPSP49366 369 aaPredicted RBP17.69■□□□□ 0.42
CPSF1-207ENST00000531727 BYSLQ13895 437 aaKnown RBP17.69■□□□□ 0.42
CPSF1-207ENST00000531727 MAP7D1Q3KQU3 841 aa17.69■□□□□ 0.42
CPSF1-207ENST00000531727 CBWD6Q4V339 395 aa17.69■□□□□ 0.42
CPSF1-207ENST00000531727 CBWD3Q5JTY5 395 aa17.69■□□□□ 0.42
CPSF1-207ENST00000531727 CBWD5Q5RIA9 395 aa17.69■□□□□ 0.42
CPSF1-207ENST00000531727 TCERG1LQ5VWI1 586 aa17.69■□□□□ 0.42
CPSF1-207ENST00000531727 EGFLAMQ63HQ2 1017 aa17.69■□□□□ 0.42
CPSF1-207ENST00000531727 ARHGAP17Q68EM7 881 aa17.69■□□□□ 0.42
CPSF1-207ENST00000531727 LPCAT2Q7L5N7 544 aa17.69■□□□□ 0.42
CPSF1-207ENST00000531727 MIB1Q86YT6 1006 aa17.69■□□□□ 0.42
CPSF1-207ENST00000531727 ZC3H3Q8IXZ2 948 aaKnown RBP17.69■□□□□ 0.42
CPSF1-207ENST00000531727 PGBD3Q8N328 593 aa17.69■□□□□ 0.42
CPSF1-207ENST00000531727 FRMD1Q8N878 549 aa17.69■□□□□ 0.42
CPSF1-207ENST00000531727 TATDN2Q93075 761 aa17.69■□□□□ 0.42
CPSF1-207ENST00000531727 CDK5RAP1Q96SZ6 601 aaKnown RBP17.69■□□□□ 0.42
CPSF1-207ENST00000531727 TSG101Q99816 390 aa17.69■□□□□ 0.42
CPSF1-207ENST00000531727 LSM14BQ9BX40 385 aaKnown RBP17.69■□□□□ 0.42
CPSF1-207ENST00000531727 UBXN6Q9BZV1 441 aa17.69■□□□□ 0.42
CPSF1-207ENST00000531727 MBD1Q9UIS9 605 aaPredicted RBP17.69■□□□□ 0.42
CPSF1-207ENST00000531727 ABCA7Q8IZY2 2146 aa17.69■□□□□ 0.42
CPSF1-207ENST00000531727 A0A1W2PQF6 199 aa17.68■□□□□ 0.42
CPSF1-207ENST00000531727 FKBP3Q00688 224 aaKnown RBP17.68■□□□□ 0.42
CPSF1-207ENST00000531727 DCAF17Q5H9S7 520 aaPredicted RBP17.68■□□□□ 0.42
CPSF1-207ENST00000531727 RAB41Q5JT25 222 aa17.68■□□□□ 0.42
CPSF1-207ENST00000531727 ANKRD40Q6AI12 368 aa17.68■□□□□ 0.42
CPSF1-207ENST00000531727 TOGARAM2Q6ZUX3 1019 aa17.68■□□□□ 0.42
CPSF1-207ENST00000531727 ENGASEQ8NFI3 743 aa17.68■□□□□ 0.42
CPSF1-207ENST00000531727 SPATA20Q8TB22 786 aa17.68■□□□□ 0.42
CPSF1-207ENST00000531727 ZNF510Q9Y2H8 683 aa17.68■□□□□ 0.42
CPSF1-207ENST00000531727 COQ4Q9Y3A0 265 aa17.68■□□□□ 0.42
CPSF1-207ENST00000531727 GTF3C3Q9Y5Q9 886 aa17.68■□□□□ 0.42
CPSF1-207ENST00000531727 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.67■□□□□ 0.42
CPSF1-207ENST00000531727 GOLGA6L4A6NEF3 574 aa17.67■□□□□ 0.42
CPSF1-207ENST00000531727 PATE3B3GLJ2 98 aa17.67■□□□□ 0.42
CPSF1-207ENST00000531727 PRRT4C9JH25 899 aa17.67■□□□□ 0.42
CPSF1-207ENST00000531727 SMC2O95347 1197 aa17.67■□□□□ 0.42
CPSF1-207ENST00000531727 KLKB1P03952 638 aa17.67■□□□□ 0.42
CPSF1-207ENST00000531727 CISD3P0C7P0 127 aa17.67■□□□□ 0.42
CPSF1-207ENST00000531727 GABRG2P18507 467 aa17.67■□□□□ 0.42
CPSF1-207ENST00000531727 WASP42768 502 aa17.67■□□□□ 0.42
CPSF1-207ENST00000531727 DGKGP49619 791 aa17.67■□□□□ 0.42
CPSF1-207ENST00000531727 COG7P83436 770 aa17.67■□□□□ 0.42
CPSF1-207ENST00000531727 SPDYCQ5MJ68 293 aa17.67■□□□□ 0.42
CPSF1-207ENST00000531727 N4BP2L1Q5TBK1 243 aaPredicted RBP17.67■□□□□ 0.42
CPSF1-207ENST00000531727 PIGZQ86VD9 579 aa17.67■□□□□ 0.42
CPSF1-207ENST00000531727 TMEFF1Q8IYR6 380 aa17.67■□□□□ 0.42
CPSF1-207ENST00000531727 ARHGAP18Q8N392 663 aa17.67■□□□□ 0.42
CPSF1-207ENST00000531727 ANKRD52Q8NB46 1076 aa17.67■□□□□ 0.42
CPSF1-207ENST00000531727 PIGKQ92643 395 aa17.67■□□□□ 0.42
CPSF1-207ENST00000531727 ACOX2Q99424 681 aa17.67■□□□□ 0.42
CPSF1-207ENST00000531727 GTPBP4Q9BZE4 634 aaKnown RBP17.67■□□□□ 0.42
CPSF1-207ENST00000531727 RASAL2Q9UJF2 1139 aa17.67■□□□□ 0.42
CPSF1-207ENST00000531727 C4orf47A7E2U8 309 aa17.66■□□□□ 0.42
CPSF1-207ENST00000531727 KCNK5O95279 499 aa17.66■□□□□ 0.42
CPSF1-207ENST00000531727 PMS1P54277 932 aaKnown RBP17.66■□□□□ 0.42
CPSF1-207ENST00000531727 SLC8A3P57103 927 aa17.66■□□□□ 0.42
CPSF1-207ENST00000531727 LRRC63Q05C16 580 aa17.66■□□□□ 0.42
CPSF1-207ENST00000531727 EFEMP1Q12805 493 aa17.66■□□□□ 0.42
CPSF1-207ENST00000531727 CUL2Q13617 745 aa17.66■□□□□ 0.42
CPSF1-207ENST00000531727 SDE2Q6IQ49 451 aa17.66■□□□□ 0.42
CPSF1-207ENST00000531727 CHPFQ8IZ52 775 aa17.66■□□□□ 0.42
CPSF1-207ENST00000531727 BHMTQ93088 406 aa17.66■□□□□ 0.42
CPSF1-207ENST00000531727 SMARCE1Q969G3 411 aa17.66■□□□□ 0.42
CPSF1-207ENST00000531727 DCLK3Q9C098 648 aa17.66■□□□□ 0.42
CPSF1-207ENST00000531727 CD248Q9HCU0 757 aa17.66■□□□□ 0.42
CPSF1-207ENST00000531727 TMEM9BQ9NQ34 198 aa17.66■□□□□ 0.42
CPSF1-207ENST00000531727 PLK2Q9NYY3 685 aa17.66■□□□□ 0.42
CPSF1-207ENST00000531727 CALCOCO1Q9P1Z2 691 aa17.66■□□□□ 0.42
CPSF1-207ENST00000531727 EVLQ9UI08 416 aaPredicted RBP17.66■□□□□ 0.42
CPSF1-207ENST00000531727 FBXO10Q9UK96 956 aa17.66■□□□□ 0.42
CPSF1-207ENST00000531727 MYO18AQ92614 2054 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms