RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 BBS2Q9BXC9 721 aa13.5□□□□□ -0.25
TM9SF1-211ENST00000531406 NUSAP1Q9BXS6 441 aaKnown RBP13.5□□□□□ -0.25
TM9SF1-211ENST00000531406 IMPG2Q9BZV3 1241 aa13.5□□□□□ -0.25
TM9SF1-211ENST00000531406 NIF3L1Q9GZT8 377 aa13.5□□□□□ -0.25
TM9SF1-211ENST00000531406 TMEM74BQ9NUR3 256 aa13.5□□□□□ -0.25
TM9SF1-211ENST00000531406 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.5□□□□□ -0.25
TM9SF1-211ENST00000531406 DNMT3LQ9UJW3 386 aa13.5□□□□□ -0.25
TM9SF1-211ENST00000531406 MAPK8IP1Q9UQF2 711 aa13.5□□□□□ -0.25
TM9SF1-211ENST00000531406 EML5Q05BV3 1969 aa13.5□□□□□ -0.25
TM9SF1-211ENST00000531406 KIAA1549LQ6ZVL6 1849 aa13.5□□□□□ -0.25
TM9SF1-211ENST00000531406 CACNA1BQ00975 2339 aa13.5□□□□□ -0.25
TM9SF1-211ENST00000531406 ATG2BQ96BY7 2078 aa13.49□□□□□ -0.25
TM9SF1-211ENST00000531406 PRRT4C9JH25 899 aa13.49□□□□□ -0.25
TM9SF1-211ENST00000531406 MDM4O15151 490 aa13.49□□□□□ -0.25
TM9SF1-211ENST00000531406 CISD3P0C7P0 127 aa13.49□□□□□ -0.25
TM9SF1-211ENST00000531406 KRT13P13646 458 aa13.49□□□□□ -0.25
TM9SF1-211ENST00000531406 CEACAM1P13688 526 aa13.49□□□□□ -0.25
TM9SF1-211ENST00000531406 PTMSP20962 102 aa13.49□□□□□ -0.25
TM9SF1-211ENST00000531406 CSRP1P21291 193 aaKnown RBP13.49□□□□□ -0.25
TM9SF1-211ENST00000531406 ITPKAP23677 461 aa13.49□□□□□ -0.25
TM9SF1-211ENST00000531406 PSMC2P35998 433 aaKnown RBP13.49□□□□□ -0.25
TM9SF1-211ENST00000531406 DPP6P42658 865 aa13.49□□□□□ -0.25
TM9SF1-211ENST00000531406 PLA2G4AP47712 749 aa13.49□□□□□ -0.25
TM9SF1-211ENST00000531406 KIF11P52732 1056 aa13.49□□□□□ -0.25
TM9SF1-211ENST00000531406 ENPEPQ07075 957 aa13.49□□□□□ -0.25
TM9SF1-211ENST00000531406 ZNF252P-AS1Q0IIN9 211 aa13.49□□□□□ -0.25
TM9SF1-211ENST00000531406 DPYDQ12882 1025 aa13.49□□□□□ -0.25
TM9SF1-211ENST00000531406 UAP1L1Q3KQV9 507 aa13.49□□□□□ -0.25
TM9SF1-211ENST00000531406 C10orf120Q5SQS8 335 aa13.49□□□□□ -0.25
TM9SF1-211ENST00000531406 SDE2Q6IQ49 451 aa13.49□□□□□ -0.25
TM9SF1-211ENST00000531406 SLC36A4Q6YBV0 504 aa13.49□□□□□ -0.25
TM9SF1-211ENST00000531406 Q6ZNB5 142 aa13.49□□□□□ -0.25
TM9SF1-211ENST00000531406 DUSP16Q9BY84 665 aa13.49□□□□□ -0.25
TM9SF1-211ENST00000531406 SCAND2PQ9GZW5 306 aaPredicted RBP13.49□□□□□ -0.25
TM9SF1-211ENST00000531406 CD248Q9HCU0 757 aa13.49□□□□□ -0.25
TM9SF1-211ENST00000531406 CALCOCO1Q9P1Z2 691 aa13.49□□□□□ -0.25
TM9SF1-211ENST00000531406 PILRBQ9UKJ0 227 aa13.49□□□□□ -0.25
TM9SF1-211ENST00000531406 NUDT5Q9UKK9 219 aa13.49□□□□□ -0.25
TM9SF1-211ENST00000531406 USP24Q9UPU5 2620 aa13.49□□□□□ -0.25
TM9SF1-211ENST00000531406 LAMA1P25391 3075 aa13.48□□□□□ -0.25
TM9SF1-211ENST00000531406 RALGAPA1Q6GYQ0 2036 aa13.48□□□□□ -0.25
TM9SF1-211ENST00000531406 CNOT1A5YKK6 2376 aaKnown RBP13.48□□□□□ -0.25
TM9SF1-211ENST00000531406 ZBTB24O43167 697 aaPredicted RBP13.48□□□□□ -0.25
TM9SF1-211ENST00000531406 AP5Z1O43299 807 aa13.48□□□□□ -0.25
TM9SF1-211ENST00000531406 ENGP17813 658 aa13.48□□□□□ -0.25
TM9SF1-211ENST00000531406 RPL13P26373 211 aaKnown RBP13.48□□□□□ -0.25
TM9SF1-211ENST00000531406 HOXD12P35452 270 aa13.48□□□□□ -0.25
TM9SF1-211ENST00000531406 MAPK8P45983 427 aa13.48□□□□□ -0.25
TM9SF1-211ENST00000531406 PSEN1P49768 467 aa13.48□□□□□ -0.25
TM9SF1-211ENST00000531406 MCCD1P59942 119 aaPredicted RBP13.48□□□□□ -0.25
TM9SF1-211ENST00000531406 RPL6Q02878 288 aaKnown RBP13.48□□□□□ -0.25
TM9SF1-211ENST00000531406 ADAM9Q13443 819 aa13.48□□□□□ -0.25
TM9SF1-211ENST00000531406 PPP1R26Q5T8A7 1209 aaPredicted RBP13.48□□□□□ -0.25
TM9SF1-211ENST00000531406 PEAR1Q5VY43 1037 aaPredicted RBP13.48□□□□□ -0.25
TM9SF1-211ENST00000531406 KIAA1211LQ6NV74 962 aa13.48□□□□□ -0.25
TM9SF1-211ENST00000531406 SLC23A3Q6PIS1 610 aa13.48□□□□□ -0.25
TM9SF1-211ENST00000531406 TOGARAM2Q6ZUX3 1019 aa13.48□□□□□ -0.25
TM9SF1-211ENST00000531406 CCDC186Q7Z3E2 898 aa13.48□□□□□ -0.25
TM9SF1-211ENST00000531406 CHPFQ8IZ52 775 aa13.48□□□□□ -0.25
TM9SF1-211ENST00000531406 GUF1Q8N442 669 aaKnown RBP13.48□□□□□ -0.25
TM9SF1-211ENST00000531406 ZNF276Q8N554 614 aa13.48□□□□□ -0.25
TM9SF1-211ENST00000531406 CCDC150Q8NCX0 1101 aa13.48□□□□□ -0.25
TM9SF1-211ENST00000531406 DNAI2Q9GZS0 605 aa13.48□□□□□ -0.25
TM9SF1-211ENST00000531406 MMRN2Q9H8L6 949 aa13.48□□□□□ -0.25
TM9SF1-211ENST00000531406 TMEM8AQ9HCN3 771 aa13.48□□□□□ -0.25
TM9SF1-211ENST00000531406 NAGPAQ9UK23 515 aa13.48□□□□□ -0.25
TM9SF1-211ENST00000531406 USP3Q9Y6I4 520 aa13.48□□□□□ -0.25
TM9SF1-211ENST00000531406 ATXN2Q99700 1313 aaKnown RBP13.47□□□□□ -0.25
TM9SF1-211ENST00000531406 MYO16Q9Y6X6 1858 aa13.47□□□□□ -0.25
TM9SF1-211ENST00000531406 IGHV1OR15-9A0A0B4J2B8 117 aa13.47□□□□□ -0.25
TM9SF1-211ENST00000531406 ZNF217O75362 1048 aa13.47□□□□□ -0.25
TM9SF1-211ENST00000531406 STC2O76061 302 aa13.47□□□□□ -0.25
TM9SF1-211ENST00000531406 KLKB1P03952 638 aa13.47□□□□□ -0.25
TM9SF1-211ENST00000531406 NDUFV2P19404 249 aa13.47□□□□□ -0.25
TM9SF1-211ENST00000531406 GTF2H1P32780 548 aa13.47□□□□□ -0.25
TM9SF1-211ENST00000531406 DGKGP49619 791 aa13.47□□□□□ -0.25
TM9SF1-211ENST00000531406 FOXC1Q12948 553 aa13.47□□□□□ -0.25
TM9SF1-211ENST00000531406 ZCWPW2Q504Y3 356 aa13.47□□□□□ -0.25
TM9SF1-211ENST00000531406 ZNF394Q53GI3 561 aa13.47□□□□□ -0.25
TM9SF1-211ENST00000531406 KRBA2Q6ZNG9 492 aa13.47□□□□□ -0.25
TM9SF1-211ENST00000531406 TADA2BQ86TJ2 420 aa13.47□□□□□ -0.25
TM9SF1-211ENST00000531406 DEFB119Q8N690 84 aa13.47□□□□□ -0.25
TM9SF1-211ENST00000531406 DEFB124Q8NES8 71 aa13.47□□□□□ -0.25
TM9SF1-211ENST00000531406 IPO4Q8TEX9 1081 aaKnown RBP13.47□□□□□ -0.25
TM9SF1-211ENST00000531406 SEMA4DQ92854 862 aa13.47□□□□□ -0.25
TM9SF1-211ENST00000531406 BHMTQ93088 406 aa13.47□□□□□ -0.25
TM9SF1-211ENST00000531406 ERLEC1Q96DZ1 483 aa13.47□□□□□ -0.25
TM9SF1-211ENST00000531406 P2RY11Q96G91 374 aa13.47□□□□□ -0.25
TM9SF1-211ENST00000531406 HEXIM2Q96MH2 286 aaKnown RBP13.47□□□□□ -0.25
TM9SF1-211ENST00000531406 GABRG3Q99928 467 aa13.47□□□□□ -0.25
TM9SF1-211ENST00000531406 CACNA2D2Q9NY47 1150 aa13.47□□□□□ -0.25
TM9SF1-211ENST00000531406 CLIC5Q9NZA1 410 aa13.47□□□□□ -0.25
TM9SF1-211ENST00000531406 FBXO10Q9UK96 956 aa13.47□□□□□ -0.25
TM9SF1-211ENST00000531406 SLC6A14Q9UN76 642 aa13.47□□□□□ -0.25
TM9SF1-211ENST00000531406 WASF3Q9UPY6 502 aa13.47□□□□□ -0.25
TM9SF1-211ENST00000531406 SPAG17Q6Q759 2223 aa13.47□□□□□ -0.25
TM9SF1-211ENST00000531406 MAP1BP46821 2468 aaKnown RBP13.47□□□□□ -0.25
TM9SF1-211ENST00000531406 A0A1W2PQ27 194 aa13.46□□□□□ -0.25
TM9SF1-211ENST00000531406 A0A1W2PQ64 194 aa13.46□□□□□ -0.25
TM9SF1-211ENST00000531406 A0A1W2PQD8 194 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms