RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 C10orf120Q5SQS8 335 aa16.61■□□□□ 0.25
CPSF1-205ENST00000531042 ZNF658Q5TYW1 1059 aaPredicted RBP16.61■□□□□ 0.25
CPSF1-205ENST00000531042 RNF43Q68DV7 783 aa16.61■□□□□ 0.25
CPSF1-205ENST00000531042 GRAMD4Q6IC98 578 aa16.61■□□□□ 0.25
CPSF1-205ENST00000531042 Q6ZNB5 142 aa16.61■□□□□ 0.25
CPSF1-205ENST00000531042 TPGS1Q6ZTW0 290 aa16.61■□□□□ 0.25
CPSF1-205ENST00000531042 CYP2U1Q7Z449 544 aa16.61■□□□□ 0.25
CPSF1-205ENST00000531042 TRMT11Q7Z4G4 463 aaKnown RBP16.61■□□□□ 0.25
CPSF1-205ENST00000531042 TADA2BQ86TJ2 420 aa16.61■□□□□ 0.25
CPSF1-205ENST00000531042 FRMD1Q8N878 549 aa16.61■□□□□ 0.25
CPSF1-205ENST00000531042 HMGB4Q8WW32 186 aa16.61■□□□□ 0.25
CPSF1-205ENST00000531042 TATDN2Q93075 761 aa16.61■□□□□ 0.25
CPSF1-205ENST00000531042 TMEM176AQ96HP8 235 aa16.61■□□□□ 0.25
CPSF1-205ENST00000531042 XPO6Q96QU8 1125 aaKnown RBP16.61■□□□□ 0.25
CPSF1-205ENST00000531042 ARID3AQ99856 593 aa16.61■□□□□ 0.25
CPSF1-205ENST00000531042 EDEM2Q9BV94 578 aa16.61■□□□□ 0.25
CPSF1-205ENST00000531042 LSM14BQ9BX40 385 aaKnown RBP16.61■□□□□ 0.25
CPSF1-205ENST00000531042 BBS2Q9BXC9 721 aa16.61■□□□□ 0.25
CPSF1-205ENST00000531042 FAM124BQ9H5Z6 455 aaPredicted RBP16.61■□□□□ 0.25
CPSF1-205ENST00000531042 DNAJC17Q9NVM6 304 aaKnown RBP16.61■□□□□ 0.25
CPSF1-205ENST00000531042 CLIC5Q9NZA1 410 aa16.61■□□□□ 0.25
CPSF1-205ENST00000531042 WDR35Q9P2L0 1181 aa16.61■□□□□ 0.25
CPSF1-205ENST00000531042 KCNA4P22459 653 aa16.6■□□□□ 0.25
CPSF1-205ENST00000531042 DHPSP49366 369 aaPredicted RBP16.6■□□□□ 0.25
CPSF1-205ENST00000531042 MAP7D1Q3KQU3 841 aa16.6■□□□□ 0.25
CPSF1-205ENST00000531042 MIB1Q86YT6 1006 aa16.6■□□□□ 0.25
CPSF1-205ENST00000531042 ZC3H3Q8IXZ2 948 aaKnown RBP16.6■□□□□ 0.25
CPSF1-205ENST00000531042 PGBD3Q8N328 593 aa16.6■□□□□ 0.25
CPSF1-205ENST00000531042 SPACA7Q96KW9 195 aa16.6■□□□□ 0.25
CPSF1-205ENST00000531042 GSDMAQ96QA5 445 aa16.6■□□□□ 0.25
CPSF1-205ENST00000531042 UBXN6Q9BZV1 441 aa16.6■□□□□ 0.25
CPSF1-205ENST00000531042 MBD1Q9UIS9 605 aaPredicted RBP16.6■□□□□ 0.25
CPSF1-205ENST00000531042 CIZ1Q9ULV3 898 aaPredicted RBP16.6■□□□□ 0.25
CPSF1-205ENST00000531042 TNRC6BQ9UPQ9 1833 aaKnown RBP16.6■□□□□ 0.25
CPSF1-205ENST00000531042 LNP1A1A4G5 178 aa16.59■□□□□ 0.25
CPSF1-205ENST00000531042 PRRT4C9JH25 899 aa16.59■□□□□ 0.25
CPSF1-205ENST00000531042 KHNYNO15037 678 aaKnown RBP16.59■□□□□ 0.25
CPSF1-205ENST00000531042 SLC16A3O15427 465 aaKnown RBP16.59■□□□□ 0.25
CPSF1-205ENST00000531042 MAP3K13O43283 966 aa16.59■□□□□ 0.25
CPSF1-205ENST00000531042 STC2O76061 302 aa16.59■□□□□ 0.25
CPSF1-205ENST00000531042 RALAP11233 206 aa16.59■□□□□ 0.25
CPSF1-205ENST00000531042 NTSR1P30989 418 aa16.59■□□□□ 0.25
CPSF1-205ENST00000531042 BYSLQ13895 437 aaKnown RBP16.59■□□□□ 0.25
CPSF1-205ENST00000531042 CBWD6Q4V339 395 aa16.59■□□□□ 0.25
CPSF1-205ENST00000531042 RAB41Q5JT25 222 aa16.59■□□□□ 0.25
CPSF1-205ENST00000531042 CBWD3Q5JTY5 395 aa16.59■□□□□ 0.25
CPSF1-205ENST00000531042 CBWD5Q5RIA9 395 aa16.59■□□□□ 0.25
CPSF1-205ENST00000531042 ARHGAP17Q68EM7 881 aa16.59■□□□□ 0.25
CPSF1-205ENST00000531042 ANKRD40Q6AI12 368 aa16.59■□□□□ 0.25
CPSF1-205ENST00000531042 LPCAT2Q7L5N7 544 aa16.59■□□□□ 0.25
CPSF1-205ENST00000531042 ENGASEQ8NFI3 743 aa16.59■□□□□ 0.25
CPSF1-205ENST00000531042 SPATA20Q8TB22 786 aa16.59■□□□□ 0.25
CPSF1-205ENST00000531042 CDK5RAP1Q96SZ6 601 aaKnown RBP16.59■□□□□ 0.25
CPSF1-205ENST00000531042 TSG101Q99816 390 aa16.59■□□□□ 0.25
CPSF1-205ENST00000531042 COQ4Q9Y3A0 265 aa16.59■□□□□ 0.25
CPSF1-205ENST00000531042 CNOT1A5YKK6 2376 aaKnown RBP16.58■□□□□ 0.25
CPSF1-205ENST00000531042 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.58■□□□□ 0.24
CPSF1-205ENST00000531042 A0A1W2PQF6 199 aa16.58■□□□□ 0.24
CPSF1-205ENST00000531042 C4orf47A7E2U8 309 aa16.58■□□□□ 0.24
CPSF1-205ENST00000531042 PATE3B3GLJ2 98 aa16.58■□□□□ 0.24
CPSF1-205ENST00000531042 KLKB1P03952 638 aa16.58■□□□□ 0.24
CPSF1-205ENST00000531042 CISD3P0C7P0 127 aa16.58■□□□□ 0.24
CPSF1-205ENST00000531042 HOXB2P14652 356 aa16.58■□□□□ 0.24
CPSF1-205ENST00000531042 GABRG2P18507 467 aa16.58■□□□□ 0.24
CPSF1-205ENST00000531042 WASP42768 502 aa16.58■□□□□ 0.24
CPSF1-205ENST00000531042 PMS1P54277 932 aaKnown RBP16.58■□□□□ 0.24
CPSF1-205ENST00000531042 FKBP3Q00688 224 aaKnown RBP16.58■□□□□ 0.24
CPSF1-205ENST00000531042 DCAF17Q5H9S7 520 aaPredicted RBP16.58■□□□□ 0.24
CPSF1-205ENST00000531042 N4BP2L1Q5TBK1 243 aaPredicted RBP16.58■□□□□ 0.24
CPSF1-205ENST00000531042 TCERG1LQ5VWI1 586 aa16.58■□□□□ 0.24
CPSF1-205ENST00000531042 EGFLAMQ63HQ2 1017 aa16.58■□□□□ 0.24
CPSF1-205ENST00000531042 TOGARAM2Q6ZUX3 1019 aa16.58■□□□□ 0.24
CPSF1-205ENST00000531042 PIGZQ86VD9 579 aa16.58■□□□□ 0.24
CPSF1-205ENST00000531042 TMEFF1Q8IYR6 380 aa16.58■□□□□ 0.24
CPSF1-205ENST00000531042 ANKRD52Q8NB46 1076 aa16.58■□□□□ 0.24
CPSF1-205ENST00000531042 PIGKQ92643 395 aa16.58■□□□□ 0.24
CPSF1-205ENST00000531042 ACOX2Q99424 681 aa16.58■□□□□ 0.24
CPSF1-205ENST00000531042 FBXO10Q9UK96 956 aa16.58■□□□□ 0.24
CPSF1-205ENST00000531042 ZNF510Q9Y2H8 683 aa16.58■□□□□ 0.24
CPSF1-205ENST00000531042 GOLGA6L4A6NEF3 574 aa16.57■□□□□ 0.24
CPSF1-205ENST00000531042 KCNK5O95279 499 aa16.57■□□□□ 0.24
CPSF1-205ENST00000531042 SMC2O95347 1197 aa16.57■□□□□ 0.24
CPSF1-205ENST00000531042 PTGER3P43115 390 aa16.57■□□□□ 0.24
CPSF1-205ENST00000531042 DGKGP49619 791 aa16.57■□□□□ 0.24
CPSF1-205ENST00000531042 COG7P83436 770 aa16.57■□□□□ 0.24
CPSF1-205ENST00000531042 EFEMP1Q12805 493 aa16.57■□□□□ 0.24
CPSF1-205ENST00000531042 SPDYCQ5MJ68 293 aa16.57■□□□□ 0.24
CPSF1-205ENST00000531042 SDE2Q6IQ49 451 aa16.57■□□□□ 0.24
CPSF1-205ENST00000531042 ARHGAP18Q8N392 663 aa16.57■□□□□ 0.24
CPSF1-205ENST00000531042 ERCC4Q92889 916 aaPredicted RBP16.57■□□□□ 0.24
CPSF1-205ENST00000531042 BHMTQ93088 406 aa16.57■□□□□ 0.24
CPSF1-205ENST00000531042 P2RY11Q96G91 374 aa16.57■□□□□ 0.24
CPSF1-205ENST00000531042 DCLK3Q9C098 648 aa16.57■□□□□ 0.24
CPSF1-205ENST00000531042 CD248Q9HCU0 757 aa16.57■□□□□ 0.24
CPSF1-205ENST00000531042 PLK2Q9NYY3 685 aa16.57■□□□□ 0.24
CPSF1-205ENST00000531042 RASAL2Q9UJF2 1139 aa16.57■□□□□ 0.24
CPSF1-205ENST00000531042 ACACBO00763 2458 aa16.57■□□□□ 0.24
CPSF1-205ENST00000531042 CEP192Q8TEP8 1941 aa16.57■□□□□ 0.24
CPSF1-205ENST00000531042 TRIM49BA6NDI0 452 aa16.56■□□□□ 0.24
CPSF1-205ENST00000531042 HMBSP08397 361 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms