RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 RBM15Q96T37 977 aaKnown RBP eCLIP9.49□□□□□ -0.89
CCDC90B-217ENST00000530253 ADPGKQ9BRR6 497 aa9.49□□□□□ -0.89
CCDC90B-217ENST00000530253 CXCL16Q9H2A7 254 aa9.49□□□□□ -0.89
CCDC90B-217ENST00000530253 TYW1Q9NV66 732 aaKnown RBP9.49□□□□□ -0.89
CCDC90B-217ENST00000530253 SPATA6Q9NWH7 488 aaPredicted RBP9.49□□□□□ -0.89
CCDC90B-217ENST00000530253 SNTG2Q9NY99 539 aa9.49□□□□□ -0.89
CCDC90B-217ENST00000530253 CPSF3Q9UKF6 684 aaKnown RBP9.49□□□□□ -0.89
CCDC90B-217ENST00000530253 EXOC7Q9UPT5 735 aa9.49□□□□□ -0.89
CCDC90B-217ENST00000530253 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.48□□□□□ -0.89
CCDC90B-217ENST00000530253 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.48□□□□□ -0.89
CCDC90B-217ENST00000530253 LCHNA4D1U4 455 aa9.48□□□□□ -0.89
CCDC90B-217ENST00000530253 C1QTNF3-AMACRE9PGA6 284 aa9.48□□□□□ -0.89
CCDC90B-217ENST00000530253 PDXKO00764 312 aa9.48□□□□□ -0.89
CCDC90B-217ENST00000530253 OGTO15294 1046 aa9.48□□□□□ -0.89
CCDC90B-217ENST00000530253 CLDN3O15551 220 aa9.48□□□□□ -0.89
CCDC90B-217ENST00000530253 B4GALT3O60512 393 aa9.48□□□□□ -0.89
CCDC90B-217ENST00000530253 OFD1O75665 1012 aa9.48□□□□□ -0.89
CCDC90B-217ENST00000530253 RECQL4O94761 1208 aa9.48□□□□□ -0.89
CCDC90B-217ENST00000530253 ADRB2P07550 413 aa9.48□□□□□ -0.89
CCDC90B-217ENST00000530253 STAG3L1P0CL83 205 aa9.48□□□□□ -0.89
CCDC90B-217ENST00000530253 HARSP12081 509 aaKnown RBP9.48□□□□□ -0.89
CCDC90B-217ENST00000530253 MYOGP15173 224 aa9.48□□□□□ -0.89
CCDC90B-217ENST00000530253 TNFRSF1AP19438 455 aa9.48□□□□□ -0.89
CCDC90B-217ENST00000530253 PTMSP20962 102 aa9.48□□□□□ -0.89
CCDC90B-217ENST00000530253 AKAP5P24588 427 aa9.48□□□□□ -0.89
CCDC90B-217ENST00000530253 MLH1P40692 756 aa9.48□□□□□ -0.89
CCDC90B-217ENST00000530253 TNFSF9P41273 254 aa9.48□□□□□ -0.89
CCDC90B-217ENST00000530253 SNRPFP62306 86 aaKnown RBP9.48□□□□□ -0.89
CCDC90B-217ENST00000530253 SLC7A5Q01650 507 aa9.48□□□□□ -0.89
CCDC90B-217ENST00000530253 NAB2Q15742 525 aa9.48□□□□□ -0.89
CCDC90B-217ENST00000530253 NFIL3Q16649 462 aa9.48□□□□□ -0.89
CCDC90B-217ENST00000530253 CAVIN1Q6NZI2 390 aaKnown RBP9.48□□□□□ -0.89
CCDC90B-217ENST00000530253 BORAQ6PGQ7 559 aa9.48□□□□□ -0.89
CCDC90B-217ENST00000530253 CRELD2Q6UXH1 353 aaPredicted RBP9.48□□□□□ -0.89
CCDC90B-217ENST00000530253 ZC3H3Q8IXZ2 948 aaKnown RBP9.48□□□□□ -0.89
CCDC90B-217ENST00000530253 C19orf47Q8N9M1 422 aaKnown RBP9.48□□□□□ -0.89
CCDC90B-217ENST00000530253 RNF169Q8NCN4 708 aa9.48□□□□□ -0.89
CCDC90B-217ENST00000530253 OR6P1Q8NGX9 317 aa9.48□□□□□ -0.89
CCDC90B-217ENST00000530253 RCC1LQ96I51 464 aaKnown RBP9.48□□□□□ -0.89
CCDC90B-217ENST00000530253 SNX27Q96L92 541 aa9.48□□□□□ -0.89
CCDC90B-217ENST00000530253 CASD1Q96PB1 797 aa9.48□□□□□ -0.89
CCDC90B-217ENST00000530253 MED15Q96RN5 788 aa9.48□□□□□ -0.89
CCDC90B-217ENST00000530253 CDX2Q99626 313 aaPredicted RBP9.48□□□□□ -0.89
CCDC90B-217ENST00000530253 MCMBPQ9BTE3 642 aa9.48□□□□□ -0.89
CCDC90B-217ENST00000530253 MSTO1Q9BUK6 570 aa9.48□□□□□ -0.89
CCDC90B-217ENST00000530253 GTPBP4Q9BZE4 634 aaKnown RBP9.48□□□□□ -0.89
CCDC90B-217ENST00000530253 TRIM6Q9C030 488 aaPredicted RBP9.48□□□□□ -0.89
CCDC90B-217ENST00000530253 TMEM117Q9H0C3 514 aa9.48□□□□□ -0.89
CCDC90B-217ENST00000530253 RSAD1Q9HA92 442 aa9.48□□□□□ -0.89
CCDC90B-217ENST00000530253 DMAC2Q9NW81 257 aa9.48□□□□□ -0.89
CCDC90B-217ENST00000530253 GULP1Q9UBP9 304 aa9.48□□□□□ -0.89
CCDC90B-217ENST00000530253 CGGBP1Q9UFW8 167 aaPredicted RBP9.48□□□□□ -0.89
CCDC90B-217ENST00000530253 TRAF3IP3Q9Y228 551 aa9.48□□□□□ -0.89
CCDC90B-217ENST00000530253 GIT1Q9Y2X7 761 aa9.48□□□□□ -0.89
CCDC90B-217ENST00000530253 RALGAPA2Q2PPJ7 1873 aa9.48□□□□□ -0.89
CCDC90B-217ENST00000530253 FNDC1Q4ZHG4 1894 aaPredicted RBP9.47□□□□□ -0.89
CCDC90B-217ENST00000530253 PTGESO14684 152 aa9.47□□□□□ -0.89
CCDC90B-217ENST00000530253 KIF20AO95235 890 aa9.47□□□□□ -0.89
CCDC90B-217ENST00000530253 IBSPP21815 317 aaPredicted RBP9.47□□□□□ -0.89
CCDC90B-217ENST00000530253 OSTNP61366 133 aa9.47□□□□□ -0.89
CCDC90B-217ENST00000530253 DPY19L1Q2PZI1 675 aa9.47□□□□□ -0.89
CCDC90B-217ENST00000530253 SLC10A6Q3KNW5 377 aa9.47□□□□□ -0.89
CCDC90B-217ENST00000530253 DPCR1Q3MIW9 517 aa9.47□□□□□ -0.89
CCDC90B-217ENST00000530253 SLFN12LQ6IEE8 588 aa9.47□□□□□ -0.89
CCDC90B-217ENST00000530253 CENPPQ6IPU0 288 aa9.47□□□□□ -0.89
CCDC90B-217ENST00000530253 TTI2Q6NXR4 508 aa9.47□□□□□ -0.89
CCDC90B-217ENST00000530253 ARMCX5Q6P1M9 558 aa9.47□□□□□ -0.89
CCDC90B-217ENST00000530253 ALKAL1Q6UXT8 129 aa9.47□□□□□ -0.89
CCDC90B-217ENST00000530253 LRRC55Q6ZSA7 311 aa9.47□□□□□ -0.89
CCDC90B-217ENST00000530253 APBB1IPQ7Z5R6 666 aaPredicted RBP9.47□□□□□ -0.89
CCDC90B-217ENST00000530253 THNSL1Q8IYQ7 743 aa9.47□□□□□ -0.89
CCDC90B-217ENST00000530253 CMTR2Q8IYT2 770 aaKnown RBP9.47□□□□□ -0.89
CCDC90B-217ENST00000530253 SYCP3Q8IZU3 236 aa9.47□□□□□ -0.89
CCDC90B-217ENST00000530253 LGI4Q8N135 537 aa9.47□□□□□ -0.89
CCDC90B-217ENST00000530253 POMGNT1Q8WZA1 660 aa9.47□□□□□ -0.89
CCDC90B-217ENST00000530253 PGBD4Q96DM1 585 aa9.47□□□□□ -0.89
CCDC90B-217ENST00000530253 SAAL1Q96ER3 474 aa9.47□□□□□ -0.89
CCDC90B-217ENST00000530253 GAD1Q99259 594 aa9.47□□□□□ -0.89
CCDC90B-217ENST00000530253 RAD9AQ99638 391 aa9.47□□□□□ -0.89
CCDC90B-217ENST00000530253 TCHPQ9BT92 498 aa9.47□□□□□ -0.89
CCDC90B-217ENST00000530253 APOL6Q9BWW8 343 aa9.47□□□□□ -0.89
CCDC90B-217ENST00000530253 C1QTNF3Q9BXJ4 246 aa9.47□□□□□ -0.89
CCDC90B-217ENST00000530253 MIOSQ9NXC5 875 aa9.47□□□□□ -0.89
CCDC90B-217ENST00000530253 HSPBP1Q9NZL4 362 aa9.47□□□□□ -0.89
CCDC90B-217ENST00000530253 CGNQ9P2M7 1197 aaKnown RBP9.47□□□□□ -0.89
CCDC90B-217ENST00000530253 AGO2Q9UKV8 859 aaKnown RBP9.47□□□□□ -0.89
CCDC90B-217ENST00000530253 PCDHB7Q9Y5E2 793 aa9.47□□□□□ -0.89
CCDC90B-217ENST00000530253 TTC26A0AVF1 554 aa9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 LINC01553A4QN01 128 aa9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 TRIM49BA6NDI0 452 aa9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 ARL5CA6NH57 179 aa9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 TBKBP1A7MCY6 615 aa9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 KIAA0391O15091 583 aaKnown RBP9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 CLIC2O15247 247 aa9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 EXTL3O43909 919 aa9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 NR3C1P04150 777 aa9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 CA3P07451 260 aa9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 CLTAP09496 248 aa9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 CXCL8P10145 99 aa9.46□□□□□ -0.9
CCDC90B-217ENST00000530253 KCNE1P15382 129 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms