RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 CYP4F2P78329 520 aa5.35□□□□□ -1.55
C11orf88-204ENST00000529661 POU5F1BQ06416 359 aa5.35□□□□□ -1.55
C11orf88-204ENST00000529661 SRSF4Q08170 494 aaKnown RBP5.35□□□□□ -1.55
C11orf88-204ENST00000529661 CERCAMQ5T4B2 595 aa5.35□□□□□ -1.55
C11orf88-204ENST00000529661 ZKSCAN2Q63HK3 967 aa5.35□□□□□ -1.55
C11orf88-204ENST00000529661 RAP1GAP2Q684P5 730 aa5.35□□□□□ -1.55
C11orf88-204ENST00000529661 SLC9A4Q6AI14 798 aa5.35□□□□□ -1.55
C11orf88-204ENST00000529661 CRTC1Q6UUV9 634 aa5.35□□□□□ -1.55
C11orf88-204ENST00000529661 KCTD20Q7Z5Y7 419 aa5.35□□□□□ -1.55
C11orf88-204ENST00000529661 RP9Q8TA86 221 aaKnown RBP5.35□□□□□ -1.55
C11orf88-204ENST00000529661 SMCR8Q8TEV9 937 aaPredicted RBP5.35□□□□□ -1.55
C11orf88-204ENST00000529661 DDB2Q92466 427 aa5.35□□□□□ -1.55
C11orf88-204ENST00000529661 DPF1Q92782 380 aa5.35□□□□□ -1.55
C11orf88-204ENST00000529661 FAM227BQ96M60 508 aa5.35□□□□□ -1.55
C11orf88-204ENST00000529661 MACROD1Q9BQ69 325 aa5.35□□□□□ -1.55
C11orf88-204ENST00000529661 C17orf80Q9BSJ5 609 aa5.35□□□□□ -1.55
C11orf88-204ENST00000529661 SORBS1Q9BX66 1292 aaKnown RBP5.35□□□□□ -1.55
C11orf88-204ENST00000529661 FSD1LQ9BXM9 530 aa5.35□□□□□ -1.55
C11orf88-204ENST00000529661 PCDHAC1Q9H158 963 aa5.35□□□□□ -1.55
C11orf88-204ENST00000529661 ZBTB26Q9HCK0 441 aa5.35□□□□□ -1.55
C11orf88-204ENST00000529661 AQP12BA6NM10 295 aa5.34□□□□□ -1.55
C11orf88-204ENST00000529661 PIP5K1BO14986 540 aa5.34□□□□□ -1.55
C11orf88-204ENST00000529661 PDE8BO95263 885 aa5.34□□□□□ -1.55
C11orf88-204ENST00000529661 PRKAR1BP31321 381 aa5.34□□□□□ -1.55
C11orf88-204ENST00000529661 ATICP31939 592 aa5.34□□□□□ -1.55
C11orf88-204ENST00000529661 ARL4CP56559 192 aa5.34□□□□□ -1.55
C11orf88-204ENST00000529661 TFF2Q03403 129 aa5.34□□□□□ -1.55
C11orf88-204ENST00000529661 SLC5A9Q2M3M2 681 aa5.34□□□□□ -1.55
C11orf88-204ENST00000529661 TRIM71Q2Q1W2 868 aaKnown RBP5.34□□□□□ -1.55
C11orf88-204ENST00000529661 ARHGAP15Q53QZ3 475 aa5.34□□□□□ -1.55
C11orf88-204ENST00000529661 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.34□□□□□ -1.55
C11orf88-204ENST00000529661 TMTC4Q5T4D3 741 aa5.34□□□□□ -1.55
C11orf88-204ENST00000529661 L1TD1Q5T7N2 865 aaKnown RBP5.34□□□□□ -1.55
C11orf88-204ENST00000529661 MANEALQ5VSG8 457 aa5.34□□□□□ -1.55
C11orf88-204ENST00000529661 TANGO2Q6ICL3 276 aa5.34□□□□□ -1.55
C11orf88-204ENST00000529661 ABHD11Q8NFV4 315 aa5.34□□□□□ -1.55
C11orf88-204ENST00000529661 STT3BQ8TCJ2 826 aa5.34□□□□□ -1.55
C11orf88-204ENST00000529661 IPO4Q8TEX9 1081 aaKnown RBP5.34□□□□□ -1.55
C11orf88-204ENST00000529661 PNISRQ8TF01 805 aaKnown RBP5.34□□□□□ -1.55
C11orf88-204ENST00000529661 REPS1Q96D71 796 aa5.34□□□□□ -1.55
C11orf88-204ENST00000529661 LTV1Q96GA3 475 aaPredicted RBP5.34□□□□□ -1.55
C11orf88-204ENST00000529661 LRFN1Q9P244 771 aa5.34□□□□□ -1.55
C11orf88-204ENST00000529661 GTF2A1LQ9UNN4 478 aa5.34□□□□□ -1.55
C11orf88-204ENST00000529661 SCAF8Q9UPN6 1271 aaKnown RBP5.34□□□□□ -1.55
C11orf88-204ENST00000529661 LINC01548A6NM66 108 aa5.33□□□□□ -1.56
C11orf88-204ENST00000529661 AP4M1O00189 453 aa5.33□□□□□ -1.56
C11orf88-204ENST00000529661 SH3BP5O60239 455 aa5.33□□□□□ -1.56
C11orf88-204ENST00000529661 COQ9O75208 318 aa5.33□□□□□ -1.56
C11orf88-204ENST00000529661 NTSR2O95665 410 aa5.33□□□□□ -1.56
C11orf88-204ENST00000529661 DLDP09622 509 aaKnown RBP5.33□□□□□ -1.56
C11orf88-204ENST00000529661 ABCG1P45844 678 aa5.33□□□□□ -1.56
C11orf88-204ENST00000529661 POLE2P56282 527 aa5.33□□□□□ -1.56
C11orf88-204ENST00000529661 E2F1Q01094 437 aa5.33□□□□□ -1.56
C11orf88-204ENST00000529661 CCNIQ14094 377 aa5.33□□□□□ -1.56
C11orf88-204ENST00000529661 KCNAB1Q14722 419 aa5.33□□□□□ -1.56
C11orf88-204ENST00000529661 POSTNQ15063 836 aa5.33□□□□□ -1.56
C11orf88-204ENST00000529661 CYP1B1Q16678 543 aa5.33□□□□□ -1.56
C11orf88-204ENST00000529661 MRNIPQ6NTE8 343 aa5.33□□□□□ -1.56
C11orf88-204ENST00000529661 JMJD6Q6NYC1 403 aaPredicted RBP5.33□□□□□ -1.56
C11orf88-204ENST00000529661 ZNF782Q6ZMW2 699 aaPredicted RBP5.33□□□□□ -1.56
C11orf88-204ENST00000529661 ANKRD18AQ8IVF6 992 aa5.33□□□□□ -1.56
C11orf88-204ENST00000529661 CCDC28AQ8IWP9 274 aa5.33□□□□□ -1.56
C11orf88-204ENST00000529661 GALNT15Q8N3T1 639 aa5.33□□□□□ -1.56
C11orf88-204ENST00000529661 OTUD7AQ8TE49 926 aaPredicted RBP5.33□□□□□ -1.56
C11orf88-204ENST00000529661 STYXQ8WUJ0 223 aa5.33□□□□□ -1.56
C11orf88-204ENST00000529661 TRIM63Q969Q1 353 aa5.33□□□□□ -1.56
C11orf88-204ENST00000529661 GCC1Q96CN9 775 aa5.33□□□□□ -1.56
C11orf88-204ENST00000529661 KATNAL1Q9BW62 490 aa5.33□□□□□ -1.56
C11orf88-204ENST00000529661 ITM2CQ9NQX7 267 aa5.33□□□□□ -1.56
C11orf88-204ENST00000529661 SAGE1Q9NXZ1 904 aa5.33□□□□□ -1.56
C11orf88-204ENST00000529661 C9orf78Q9NZ63 289 aaPredicted RBP5.33□□□□□ -1.56
C11orf88-204ENST00000529661 CA14Q9ULX7 337 aa5.33□□□□□ -1.56
C11orf88-204ENST00000529661 DTNAQ9Y4J8 743 aa5.33□□□□□ -1.56
C11orf88-204ENST00000529661 OR2W5A6NFC9 320 aa5.32□□□□□ -1.56
C11orf88-204ENST00000529661 WIPF3A6NGB9 483 aa5.32□□□□□ -1.56
C11orf88-204ENST00000529661 M0R3H8 397 aa5.32□□□□□ -1.56
C11orf88-204ENST00000529661 PSMD9O00233 223 aa5.32□□□□□ -1.56
C11orf88-204ENST00000529661 IPO5O00410 1097 aaKnown RBP5.32□□□□□ -1.56
C11orf88-204ENST00000529661 EXOC3O60645 756 aa5.32□□□□□ -1.56
C11orf88-204ENST00000529661 PRKCBP05771 671 aa5.32□□□□□ -1.56
C11orf88-204ENST00000529661 NHLRC4P0CG21 123 aaPredicted RBP5.32□□□□□ -1.56
C11orf88-204ENST00000529661 FPR3P25089 353 aa5.32□□□□□ -1.56
C11orf88-204ENST00000529661 MTHFSP49914 203 aa5.32□□□□□ -1.56
C11orf88-204ENST00000529661 SLC10A2Q12908 348 aaPredicted RBP5.32□□□□□ -1.56
C11orf88-204ENST00000529661 PRKG1Q13976 671 aa5.32□□□□□ -1.56
C11orf88-204ENST00000529661 TBC1D25Q3MII6 688 aa5.32□□□□□ -1.56
C11orf88-204ENST00000529661 ALFQ53S48 1182 aa5.32□□□□□ -1.56
C11orf88-204ENST00000529661 FAXCQ5TGI0 409 aa5.32□□□□□ -1.56
C11orf88-204ENST00000529661 PRAMEF17Q5VTA0 474 aa5.32□□□□□ -1.56
C11orf88-204ENST00000529661 CYP26C1Q6V0L0 522 aa5.32□□□□□ -1.56
C11orf88-204ENST00000529661 TRIM72Q6ZMU5 477 aa5.32□□□□□ -1.56
C11orf88-204ENST00000529661 SRRM1Q8IYB3 904 aaKnown RBP5.32□□□□□ -1.56
C11orf88-204ENST00000529661 SEMA6DQ8NFY4 1073 aa5.32□□□□□ -1.56
C11orf88-204ENST00000529661 PRR25Q96S07 402 aa5.32□□□□□ -1.56
C11orf88-204ENST00000529661 ANAPC4Q9UJX5 808 aa5.32□□□□□ -1.56
C11orf88-204ENST00000529661 GABRQQ9UN88 632 aa5.32□□□□□ -1.56
C11orf88-204ENST00000529661 USP22Q9UPT9 525 aa5.32□□□□□ -1.56
C11orf88-204ENST00000529661 POLR2AP24928 1970 aaKnown RBP5.32□□□□□ -1.56
C11orf88-204ENST00000529661 PCSK5Q92824 1860 aa5.32□□□□□ -1.56
C11orf88-204ENST00000529661 TRIM38O00635 465 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms