RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 COQ9O75208 318 aa4.55□□□□□ -1.68
CD44-219ENST00000525685 FGF18O76093 207 aa4.55□□□□□ -1.68
CD44-219ENST00000525685 TTLL1O95922 423 aa4.55□□□□□ -1.68
CD44-219ENST00000525685 FESP07332 822 aa4.55□□□□□ -1.68
CD44-219ENST00000525685 ELFN1P0C7U0 828 aa4.55□□□□□ -1.68
CD44-219ENST00000525685 WT1P19544 449 aaPredicted RBP4.55□□□□□ -1.68
CD44-219ENST00000525685 EPHA3P29320 983 aa4.55□□□□□ -1.68
CD44-219ENST00000525685 CLCN2P51788 898 aa4.55□□□□□ -1.68
CD44-219ENST00000525685 PGDP52209 483 aa4.55□□□□□ -1.68
CD44-219ENST00000525685 HTRA4P83105 476 aaPredicted RBP4.55□□□□□ -1.68
CD44-219ENST00000525685 CHAF1AQ13111 956 aaPredicted RBP4.55□□□□□ -1.68
CD44-219ENST00000525685 KCNAB1Q14722 419 aa4.55□□□□□ -1.68
CD44-219ENST00000525685 TXNRD1Q16881 649 aa4.55□□□□□ -1.68
CD44-219ENST00000525685 ZNF618Q5T7W0 954 aa4.55□□□□□ -1.68
CD44-219ENST00000525685 GRASPQ7Z6J2 395 aaPredicted RBP4.55□□□□□ -1.68
CD44-219ENST00000525685 DTX2Q86UW9 622 aa4.55□□□□□ -1.68
CD44-219ENST00000525685 IZUMO1Q8IYV9 350 aa4.55□□□□□ -1.68
CD44-219ENST00000525685 ABRAQ8N0Z2 381 aa4.55□□□□□ -1.68
CD44-219ENST00000525685 FANCBQ8NB91 859 aa4.55□□□□□ -1.68
CD44-219ENST00000525685 MUL1Q969V5 352 aa4.55□□□□□ -1.68
CD44-219ENST00000525685 KIAA1191Q96A73 305 aa4.55□□□□□ -1.68
CD44-219ENST00000525685 ZBTB45Q96K62 511 aaPredicted RBP4.55□□□□□ -1.68
CD44-219ENST00000525685 SNX27Q96L92 541 aa4.55□□□□□ -1.68
CD44-219ENST00000525685 HIST1H2AAQ96QV6 131 aa4.55□□□□□ -1.68
CD44-219ENST00000525685 TIMP4Q99727 224 aa4.55□□□□□ -1.68
CD44-219ENST00000525685 C17orf80Q9BSJ5 609 aa4.55□□□□□ -1.68
CD44-219ENST00000525685 SELENOOQ9BVL4 669 aa4.55□□□□□ -1.68
CD44-219ENST00000525685 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.55□□□□□ -1.68
CD44-219ENST00000525685 PLCB1Q9NQ66 1216 aa4.55□□□□□ -1.68
CD44-219ENST00000525685 CDC23Q9UJX2 597 aa4.55□□□□□ -1.68
CD44-219ENST00000525685 ST3GAL5Q9UNP4 418 aa4.55□□□□□ -1.68
CD44-219ENST00000525685 HPSEQ9Y251 543 aa4.55□□□□□ -1.68
CD44-219ENST00000525685 SYNMO15061 1565 aa4.55□□□□□ -1.68
CD44-219ENST00000525685 KANK1Q14678 1352 aa4.54□□□□□ -1.68
CD44-219ENST00000525685 TNRQ92752 1358 aa4.54□□□□□ -1.68
CD44-219ENST00000525685 ADGRA2Q96PE1 1338 aa4.54□□□□□ -1.68
CD44-219ENST00000525685 A0A1W2PPC4 97 aa4.54□□□□□ -1.68
CD44-219ENST00000525685 VWC2LB2RUY7 222 aa4.54□□□□□ -1.68
CD44-219ENST00000525685 QSOX1O00391 747 aa4.54□□□□□ -1.68
CD44-219ENST00000525685 PODXLO00592 558 aa4.54□□□□□ -1.68
CD44-219ENST00000525685 HNRNPDLO14979 420 aaKnown RBP4.54□□□□□ -1.68
CD44-219ENST00000525685 ONECUT2O95948 504 aa4.54□□□□□ -1.68
CD44-219ENST00000525685 LDHAP00338 332 aaKnown RBP4.54□□□□□ -1.68
CD44-219ENST00000525685 A1BGP04217 495 aa4.54□□□□□ -1.68
CD44-219ENST00000525685 EBLN1P0CF75 366 aa4.54□□□□□ -1.68
CD44-219ENST00000525685 HGFP14210 728 aa4.54□□□□□ -1.68
CD44-219ENST00000525685 EEF1GP26641 437 aaKnown RBP4.54□□□□□ -1.68
CD44-219ENST00000525685 SERPINB3P29508 390 aa4.54□□□□□ -1.68
CD44-219ENST00000525685 ATICP31939 592 aa4.54□□□□□ -1.68
CD44-219ENST00000525685 LIPAP38571 399 aa4.54□□□□□ -1.68
CD44-219ENST00000525685 GATMP50440 423 aa4.54□□□□□ -1.68
CD44-219ENST00000525685 PROK1P58294 105 aa4.54□□□□□ -1.68
CD44-219ENST00000525685 SP2Q02086 613 aa4.54□□□□□ -1.68
CD44-219ENST00000525685 MORC3Q14149 939 aa4.54□□□□□ -1.68
CD44-219ENST00000525685 NPY5RQ15761 445 aa4.54□□□□□ -1.68
CD44-219ENST00000525685 LY6KQ17RY6 165 aa4.54□□□□□ -1.68
CD44-219ENST00000525685 ZNF750Q32MQ0 723 aa4.54□□□□□ -1.68
CD44-219ENST00000525685 AKNAD1Q5T1N1 836 aa4.54□□□□□ -1.68
CD44-219ENST00000525685 FAXCQ5TGI0 409 aa4.54□□□□□ -1.68
CD44-219ENST00000525685 CRTC1Q6UUV9 634 aa4.54□□□□□ -1.68
CD44-219ENST00000525685 CATSPERGQ6ZRH7 1159 aa4.54□□□□□ -1.68
CD44-219ENST00000525685 CAND1Q86VP6 1230 aaKnown RBP4.54□□□□□ -1.68
CD44-219ENST00000525685 RAB11FIP4Q86YS3 637 aa4.54□□□□□ -1.68
CD44-219ENST00000525685 FAM109AQ8N4B1 249 aa4.54□□□□□ -1.68
CD44-219ENST00000525685 RNF152Q8N8N0 203 aa4.54□□□□□ -1.68
CD44-219ENST00000525685 PMM1Q92871 262 aa4.54□□□□□ -1.68
CD44-219ENST00000525685 ZNF668Q96K58 619 aaPredicted RBP4.54□□□□□ -1.68
CD44-219ENST00000525685 PBKQ96KB5 322 aa4.54□□□□□ -1.68
CD44-219ENST00000525685 KRTAP9-8Q9BYQ0 159 aa4.54□□□□□ -1.68
CD44-219ENST00000525685 INO80BQ9C086 356 aaPredicted RBP4.54□□□□□ -1.68
CD44-219ENST00000525685 ARHGEF3Q9NR81 526 aa4.54□□□□□ -1.68
CD44-219ENST00000525685 TMOD4Q9NZQ9 345 aa4.54□□□□□ -1.68
CD44-219ENST00000525685 DNMT3BQ9UBC3 853 aaKnown RBP4.54□□□□□ -1.68
CD44-219ENST00000525685 DKK3Q9UBP4 350 aa4.54□□□□□ -1.68
CD44-219ENST00000525685 SNX14Q9Y5W7 946 aa4.54□□□□□ -1.68
CD44-219ENST00000525685 A2ML1A8K2U0 1454 aa4.54□□□□□ -1.68
CD44-219ENST00000525685 RPRD2Q5VT52 1461 aaKnown RBP4.54□□□□□ -1.68
CD44-219ENST00000525685 PIK3C2BO00750 1634 aa4.54□□□□□ -1.68
CD44-219ENST00000525685 SPHKAPQ2M3C7 1700 aa4.53□□□□□ -1.68
CD44-219ENST00000525685 UBR1Q8IWV7 1749 aa4.53□□□□□ -1.68
CD44-219ENST00000525685 CD3EAPO15446 510 aaKnown RBP4.53□□□□□ -1.68
CD44-219ENST00000525685 URI1O94763 535 aaPredicted RBP4.53□□□□□ -1.68
CD44-219ENST00000525685 VNN1O95497 513 aa4.53□□□□□ -1.68
CD44-219ENST00000525685 NDST3O95803 873 aa4.53□□□□□ -1.68
CD44-219ENST00000525685 CSF1RP07333 972 aa4.53□□□□□ -1.68
CD44-219ENST00000525685 UQCRC1P31930 480 aa4.53□□□□□ -1.68
CD44-219ENST00000525685 PPM1AP35813 382 aa4.53□□□□□ -1.68
CD44-219ENST00000525685 HTR3AP46098 478 aa4.53□□□□□ -1.68
CD44-219ENST00000525685 HSPA7P48741 367 aa4.53□□□□□ -1.68
CD44-219ENST00000525685 COPAP53621 1224 aa4.53□□□□□ -1.68
CD44-219ENST00000525685 BCAT1P54687 386 aa4.53□□□□□ -1.68
CD44-219ENST00000525685 TPTEP56180 551 aa4.53□□□□□ -1.68
CD44-219ENST00000525685 SLC35G1Q2M3R5 365 aa4.53□□□□□ -1.68
CD44-219ENST00000525685 DGKKQ5KSL6 1271 aa4.53□□□□□ -1.68
CD44-219ENST00000525685 SLC9A4Q6AI14 798 aa4.53□□□□□ -1.68
CD44-219ENST00000525685 FCRL6Q6DN72 434 aa4.53□□□□□ -1.68
CD44-219ENST00000525685 PGBD2Q6P3X8 592 aa4.53□□□□□ -1.68
CD44-219ENST00000525685 CLEC9AQ6UXN8 241 aa4.53□□□□□ -1.68
CD44-219ENST00000525685 TOGARAM2Q6ZUX3 1019 aa4.53□□□□□ -1.68
CD44-219ENST00000525685 KRT28Q7Z3Y7 464 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms