RNA–Protein interactions for RNA: ENST00000525503.5

CCDC90B-203, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-203ENST00000525503 SLC15A5A6NIM6 579 aa17.13■□□□□ 0.33
CCDC90B-203ENST00000525503 KPNA7A9QM74 516 aa17.13■□□□□ 0.33
CCDC90B-203ENST00000525503 DYNC1LI2O43237 492 aaPredicted RBP17.13■□□□□ 0.33
CCDC90B-203ENST00000525503 AVILO75366 819 aa17.13■□□□□ 0.33
CCDC90B-203ENST00000525503 PIAS1O75925 651 aa17.13■□□□□ 0.33
CCDC90B-203ENST00000525503 F2P00734 622 aa17.13■□□□□ 0.33
CCDC90B-203ENST00000525503 APRTP07741 180 aa17.13■□□□□ 0.33
CCDC90B-203ENST00000525503 CCDC130P13994 396 aa17.13■□□□□ 0.33
CCDC90B-203ENST00000525503 ADORA2BP29275 332 aa17.13■□□□□ 0.33
CCDC90B-203ENST00000525503 SLC18A2Q05940 514 aa17.13■□□□□ 0.33
CCDC90B-203ENST00000525503 FAAP100Q0VG06 881 aa17.13■□□□□ 0.33
CCDC90B-203ENST00000525503 SPDYAQ5MJ70 313 aa17.13■□□□□ 0.33
CCDC90B-203ENST00000525503 OTOAQ7RTW8 1153 aa17.13■□□□□ 0.33
CCDC90B-203ENST00000525503 VPS52Q8N1B4 723 aa17.13■□□□□ 0.33
CCDC90B-203ENST00000525503 KBTBD7Q8WVZ9 684 aa17.13■□□□□ 0.33
CCDC90B-203ENST00000525503 C10orf82Q8WW14 230 aa17.13■□□□□ 0.33
CCDC90B-203ENST00000525503 RAB3IPQ96QF0 476 aaPredicted RBP17.13■□□□□ 0.33
CCDC90B-203ENST00000525503 APOL6Q9BWW8 343 aa17.13■□□□□ 0.33
CCDC90B-203ENST00000525503 MYLK2Q9H1R3 596 aa17.13■□□□□ 0.33
CCDC90B-203ENST00000525503 PRDM16Q9HAZ2 1276 aa17.13■□□□□ 0.33
CCDC90B-203ENST00000525503 ETNK1Q9HBU6 452 aa17.13■□□□□ 0.33
CCDC90B-203ENST00000525503 GTF2IRD1Q9UHL9 959 aa17.13■□□□□ 0.33
CCDC90B-203ENST00000525503 ZNF180Q9UJW8 692 aa17.13■□□□□ 0.33
CCDC90B-203ENST00000525503 AP4E1Q9UPM8 1137 aa17.13■□□□□ 0.33
CCDC90B-203ENST00000525503 TTLL3Q9Y4R7 772 aa17.13■□□□□ 0.33
CCDC90B-203ENST00000525503 GOLGA8RI6L899 631 aa17.12■□□□□ 0.33
CCDC90B-203ENST00000525503 KRT37O76014 449 aa17.12■□□□□ 0.33
CCDC90B-203ENST00000525503 PDGFRBP09619 1106 aa17.12■□□□□ 0.33
CCDC90B-203ENST00000525503 LCP1P13796 627 aa17.12■□□□□ 0.33
CCDC90B-203ENST00000525503 KCNE1P15382 129 aa17.12■□□□□ 0.33
CCDC90B-203ENST00000525503 TPSB2P20231 275 aa17.12■□□□□ 0.33
CCDC90B-203ENST00000525503 NEK3P51956 506 aa17.12■□□□□ 0.33
CCDC90B-203ENST00000525503 TPSAB1Q15661 275 aa17.12■□□□□ 0.33
CCDC90B-203ENST00000525503 FAM110CQ1W6H9 321 aa17.12■□□□□ 0.33
CCDC90B-203ENST00000525503 SV2CQ496J9 727 aa17.12■□□□□ 0.33
CCDC90B-203ENST00000525503 EFHC1Q5JVL4 640 aa17.12■□□□□ 0.33
CCDC90B-203ENST00000525503 SYCP2LQ5T4T6 812 aa17.12■□□□□ 0.33
CCDC90B-203ENST00000525503 STRADAQ7RTN6 431 aa17.12■□□□□ 0.33
CCDC90B-203ENST00000525503 CAND1Q86VP6 1230 aaKnown RBP17.12■□□□□ 0.33
CCDC90B-203ENST00000525503 CHSY1Q86X52 802 aa17.12■□□□□ 0.33
CCDC90B-203ENST00000525503 APPL2Q8NEU8 664 aa17.12■□□□□ 0.33
CCDC90B-203ENST00000525503 QKIQ96PU8 341 aaKnown RBP eCLIP17.12■□□□□ 0.33
CCDC90B-203ENST00000525503 MANSC1Q9H8J5 431 aa17.12■□□□□ 0.33
CCDC90B-203ENST00000525503 POPDC2Q9HBU9 364 aa17.12■□□□□ 0.33
CCDC90B-203ENST00000525503 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.12■□□□□ 0.33
CCDC90B-203ENST00000525503 CHKBQ9Y259 395 aa17.12■□□□□ 0.33
CCDC90B-203ENST00000525503 SMIM28A0A1B0GU29 152 aa17.11■□□□□ 0.33
CCDC90B-203ENST00000525503 ADCY6O43306 1168 aa17.11■□□□□ 0.33
CCDC90B-203ENST00000525503 FAM155BO75949 473 aa17.11■□□□□ 0.33
CCDC90B-203ENST00000525503 AKAP5P24588 427 aa17.11■□□□□ 0.33
CCDC90B-203ENST00000525503 PRKCHP24723 683 aa17.11■□□□□ 0.33
CCDC90B-203ENST00000525503 TAF6P49848 677 aa17.11■□□□□ 0.33
CCDC90B-203ENST00000525503 IRF5Q13568 498 aa17.11■□□□□ 0.33
CCDC90B-203ENST00000525503 LRRC6Q86X45 466 aa17.11■□□□□ 0.33
CCDC90B-203ENST00000525503 ANKLE1Q8NAG6 615 aa17.11■□□□□ 0.33
CCDC90B-203ENST00000525503 CCDC110Q8TBZ0 833 aa17.11■□□□□ 0.33
CCDC90B-203ENST00000525503 ERP27Q96DN0 273 aa17.11■□□□□ 0.33
CCDC90B-203ENST00000525503 THOC1Q96FV9 657 aaKnown RBP17.11■□□□□ 0.33
CCDC90B-203ENST00000525503 TNIP3Q96KP6 325 aa17.11■□□□□ 0.33
CCDC90B-203ENST00000525503 LPIN3Q9BQK8 851 aa17.11■□□□□ 0.33
CCDC90B-203ENST00000525503 SLC17A7Q9P2U7 560 aa17.11■□□□□ 0.33
CCDC90B-203ENST00000525503 PIN4Q9Y237 131 aaKnown RBP17.11■□□□□ 0.33
CCDC90B-203ENST00000525503 WDR91A4D1P6 747 aa17.11■□□□□ 0.33
CCDC90B-203ENST00000525503 HGSO14964 777 aaPredicted RBP17.11■□□□□ 0.33
CCDC90B-203ENST00000525503 HUS1O60921 280 aa17.11■□□□□ 0.33
CCDC90B-203ENST00000525503 SNRPAP09012 282 aaKnown RBP17.11■□□□□ 0.33
CCDC90B-203ENST00000525503 DHRS4L1P0CG22 281 aa17.11■□□□□ 0.33
CCDC90B-203ENST00000525503 FGFR1P11362 822 aa17.11■□□□□ 0.33
CCDC90B-203ENST00000525503 TFE3P19532 575 aaPredicted RBP17.11■□□□□ 0.33
CCDC90B-203ENST00000525503 SLC8A3P57103 927 aa17.11■□□□□ 0.33
CCDC90B-203ENST00000525503 MFSD10Q14728 455 aa17.11■□□□□ 0.33
CCDC90B-203ENST00000525503 PREPLQ4J6C6 727 aaPredicted RBP17.11■□□□□ 0.33
CCDC90B-203ENST00000525503 XKR4Q5GH76 650 aa17.11■□□□□ 0.33
CCDC90B-203ENST00000525503 FAXCQ5TGI0 409 aa17.11■□□□□ 0.33
CCDC90B-203ENST00000525503 BZW1Q7L1Q6 419 aaKnown RBP17.11■□□□□ 0.33
CCDC90B-203ENST00000525503 CTAGE3PQ8IX95 158 aa17.11■□□□□ 0.33
CCDC90B-203ENST00000525503 AGGF1Q8N302 714 aaeCLIP17.11■□□□□ 0.33
CCDC90B-203ENST00000525503 ZNF276Q8N554 614 aa17.11■□□□□ 0.33
CCDC90B-203ENST00000525503 PPM1NQ8N819 430 aa17.11■□□□□ 0.33
CCDC90B-203ENST00000525503 NPLOC4Q8TAT6 608 aa17.11■□□□□ 0.33
CCDC90B-203ENST00000525503 CLEC4CQ8WTT0 213 aa17.11■□□□□ 0.33
CCDC90B-203ENST00000525503 SERAC1Q96JX3 654 aa17.11■□□□□ 0.33
CCDC90B-203ENST00000525503 CSPG4P5Q96PW8 444 aa17.11■□□□□ 0.33
CCDC90B-203ENST00000525503 KCTD15Q96SI1 283 aaPredicted RBP17.11■□□□□ 0.33
CCDC90B-203ENST00000525503 KLF6Q99612 283 aaPredicted RBP17.11■□□□□ 0.33
CCDC90B-203ENST00000525503 XAB2Q9HCS7 855 aaKnown RBP17.11■□□□□ 0.33
CCDC90B-203ENST00000525503 RCOR3Q9P2K3 495 aaPredicted RBP17.11■□□□□ 0.33
CCDC90B-203ENST00000525503 GLTPD2A6NH11 291 aa17.1■□□□□ 0.33
CCDC90B-203ENST00000525503 VGLL3A8MV65 326 aa17.1■□□□□ 0.33
CCDC90B-203ENST00000525503 HACD1B0YJ81 288 aa17.1■□□□□ 0.33
CCDC90B-203ENST00000525503 C2CD2LO14523 706 aa17.1■□□□□ 0.33
CCDC90B-203ENST00000525503 KRT16P08779 473 aa17.1■□□□□ 0.33
CCDC90B-203ENST00000525503 PYGBP11216 843 aa17.1■□□□□ 0.33
CCDC90B-203ENST00000525503 EZRP15311 586 aaKnown RBP17.1■□□□□ 0.33
CCDC90B-203ENST00000525503 LMO2P25791 158 aa17.1■□□□□ 0.33
CCDC90B-203ENST00000525503 SARNPP82979 210 aaKnown RBP17.1■□□□□ 0.33
CCDC90B-203ENST00000525503 GBE1Q04446 702 aa17.1■□□□□ 0.33
CCDC90B-203ENST00000525503 SH2D5Q6ZV89 423 aa17.1■□□□□ 0.33
CCDC90B-203ENST00000525503 LIMS2Q7Z4I7 341 aa17.1■□□□□ 0.33
CCDC90B-203ENST00000525503 PRPF39Q86UA1 669 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms