RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 ZBED1O96006 694 aa6.8□□□□□ -1.32
CD44-214ENST00000525211 OAS1P00973 400 aaKnown RBP6.8□□□□□ -1.32
CD44-214ENST00000525211 POU2F2P09086 479 aa6.8□□□□□ -1.32
CD44-214ENST00000525211 CSH1P0DML2 217 aa6.8□□□□□ -1.32
CD44-214ENST00000525211 CSH2P0DML3 217 aa6.8□□□□□ -1.32
CD44-214ENST00000525211 TCF4P15884 667 aa6.8□□□□□ -1.32
CD44-214ENST00000525211 JUNDP17535 347 aa6.8□□□□□ -1.32
CD44-214ENST00000525211 ABCB4P21439 1286 aa6.8□□□□□ -1.32
CD44-214ENST00000525211 FSHRP23945 695 aa6.8□□□□□ -1.32
CD44-214ENST00000525211 ANXA13P27216 316 aa6.8□□□□□ -1.32
CD44-214ENST00000525211 VIPR2P41587 438 aa6.8□□□□□ -1.32
CD44-214ENST00000525211 RNASE9P60153 205 aaKnown RBP6.8□□□□□ -1.32
CD44-214ENST00000525211 YWHAGP61981 247 aaKnown RBP eCLIP6.8□□□□□ -1.32
CD44-214ENST00000525211 RPL7AP62424 266 aaKnown RBP6.8□□□□□ -1.32
CD44-214ENST00000525211 CDK17Q00537 523 aa6.8□□□□□ -1.32
CD44-214ENST00000525211 STILQ15468 1287 aa6.8□□□□□ -1.32
CD44-214ENST00000525211 SLC18A3Q16572 532 aa6.8□□□□□ -1.32
CD44-214ENST00000525211 LEXMQ3ZCV2 418 aa6.8□□□□□ -1.32
CD44-214ENST00000525211 CCDC122Q5T0U0 273 aa6.8□□□□□ -1.32
CD44-214ENST00000525211 GPR158Q5T848 1215 aa6.8□□□□□ -1.32
CD44-214ENST00000525211 BSPRYQ5W0U4 402 aa6.8□□□□□ -1.32
CD44-214ENST00000525211 ALKBH5Q6P6C2 394 aaKnown RBP6.8□□□□□ -1.32
CD44-214ENST00000525211 GET4Q7L5D6 327 aaPredicted RBP6.8□□□□□ -1.32
CD44-214ENST00000525211 DENND4AQ7Z401 1863 aa6.8□□□□□ -1.32
CD44-214ENST00000525211 ERICH1Q86X53 443 aa6.8□□□□□ -1.32
CD44-214ENST00000525211 CNGA4Q8IV77 575 aa6.8□□□□□ -1.32
CD44-214ENST00000525211 LRRC8AQ8IWT6 810 aa6.8□□□□□ -1.32
CD44-214ENST00000525211 DEFB106AQ8N104 65 aa6.8□□□□□ -1.32
CD44-214ENST00000525211 MAB21L3Q8N8X9 362 aa6.8□□□□□ -1.32
CD44-214ENST00000525211 STK32AQ8WU08 396 aa6.8□□□□□ -1.32
CD44-214ENST00000525211 TRMT2BQ96GJ1 504 aaKnown RBP6.8□□□□□ -1.32
CD44-214ENST00000525211 HSFY1Q96LI6 401 aa6.8□□□□□ -1.32
CD44-214ENST00000525211 SPSB2Q99619 263 aa6.8□□□□□ -1.32
CD44-214ENST00000525211 BAG1Q99933 345 aaPredicted RBP6.8□□□□□ -1.32
CD44-214ENST00000525211 LACRTQ9GZZ8 138 aa6.8□□□□□ -1.32
CD44-214ENST00000525211 PDCL3Q9H2J4 239 aa6.8□□□□□ -1.32
CD44-214ENST00000525211 ATXN3LQ9H3M9 355 aa6.8□□□□□ -1.32
CD44-214ENST00000525211 PIDD1Q9HB75 910 aa6.8□□□□□ -1.32
CD44-214ENST00000525211 LRRC4Q9HBW1 653 aa6.8□□□□□ -1.32
CD44-214ENST00000525211 PNPLA8Q9NP80 782 aa6.8□□□□□ -1.32
CD44-214ENST00000525211 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.8□□□□□ -1.32
CD44-214ENST00000525211 ADAM22Q9P0K1 906 aa6.8□□□□□ -1.32
CD44-214ENST00000525211 MYO1AQ9UBC5 1043 aa6.8□□□□□ -1.32
CD44-214ENST00000525211 SFMBT1Q9UHJ3 866 aa6.8□□□□□ -1.32
CD44-214ENST00000525211 XPO7Q9UIA9 1087 aaKnown RBP6.8□□□□□ -1.32
CD44-214ENST00000525211 MAFFQ9ULX9 164 aa6.8□□□□□ -1.32
CD44-214ENST00000525211 SNX10Q9Y5X0 201 aa6.8□□□□□ -1.32
CD44-214ENST00000525211 MYO16Q9Y6X6 1858 aa6.8□□□□□ -1.32
CD44-214ENST00000525211 COL4A3Q01955 1670 aa6.8□□□□□ -1.32
CD44-214ENST00000525211 DENND4CQ5VZ89 1909 aa6.8□□□□□ -1.32
CD44-214ENST00000525211 VCANP13611 3396 aa6.79□□□□□ -1.32
CD44-214ENST00000525211 GREM1O60565 184 aa6.79□□□□□ -1.32
CD44-214ENST00000525211 XYLBO75191 536 aa6.79□□□□□ -1.32
CD44-214ENST00000525211 RTN2O75298 545 aa6.79□□□□□ -1.32
CD44-214ENST00000525211 RTN3O95197 1032 aaPredicted RBP6.79□□□□□ -1.32
CD44-214ENST00000525211 NDUFA10O95299 355 aa6.79□□□□□ -1.32
CD44-214ENST00000525211 LCA5LO95447 670 aa6.79□□□□□ -1.32
CD44-214ENST00000525211 F12P00748 615 aaPredicted RBP6.79□□□□□ -1.32
CD44-214ENST00000525211 LTFP02788 710 aa6.79□□□□□ -1.32
CD44-214ENST00000525211 KLKB1P03952 638 aa6.79□□□□□ -1.32
CD44-214ENST00000525211 HMBSP08397 361 aa6.79□□□□□ -1.32
CD44-214ENST00000525211 RARGP13631 454 aa6.79□□□□□ -1.32
CD44-214ENST00000525211 HOXB8P17481 243 aaPredicted RBP6.79□□□□□ -1.32
CD44-214ENST00000525211 RFC1P35251 1148 aaPredicted RBP6.79□□□□□ -1.32
CD44-214ENST00000525211 SLC6A3Q01959 620 aa6.79□□□□□ -1.32
CD44-214ENST00000525211 VAC14Q08AM6 782 aa6.79□□□□□ -1.32
CD44-214ENST00000525211 SMAD4Q13485 552 aaKnown RBP6.79□□□□□ -1.32
CD44-214ENST00000525211 MAMLD1Q13495 774 aa6.79□□□□□ -1.32
CD44-214ENST00000525211 EIF4EBP2Q13542 120 aaPredicted RBP6.79□□□□□ -1.32
CD44-214ENST00000525211 VEPH1Q14D04 833 aa6.79□□□□□ -1.32
CD44-214ENST00000525211 C15orf59Q2T9L4 293 aaPredicted RBP6.79□□□□□ -1.32
CD44-214ENST00000525211 CCDC14Q49A88 953 aa6.79□□□□□ -1.32
CD44-214ENST00000525211 MSS51Q4VC12 460 aa6.79□□□□□ -1.32
CD44-214ENST00000525211 FAM78AQ5JUQ0 283 aa6.79□□□□□ -1.32
CD44-214ENST00000525211 SNX30Q5VWJ9 437 aa6.79□□□□□ -1.32
CD44-214ENST00000525211 TXNRD3NBQ6F5E7 133 aa6.79□□□□□ -1.32
CD44-214ENST00000525211 TANGO2Q6ICL3 276 aa6.79□□□□□ -1.32
CD44-214ENST00000525211 PLEKHA7Q6IQ23 1121 aa6.79□□□□□ -1.32
CD44-214ENST00000525211 PTCRAQ6ISU1 281 aaPredicted RBP6.79□□□□□ -1.32
CD44-214ENST00000525211 PARM1Q6UWI2 310 aa6.79□□□□□ -1.32
CD44-214ENST00000525211 TRIM72Q6ZMU5 477 aa6.79□□□□□ -1.32
CD44-214ENST00000525211 PDZD4Q76G19 769 aaPredicted RBP6.79□□□□□ -1.32
CD44-214ENST00000525211 SLC26A9Q7LBE3 791 aa6.79□□□□□ -1.32
CD44-214ENST00000525211 TAC4Q86UU9 113 aa6.79□□□□□ -1.32
CD44-214ENST00000525211 SCML4Q8N228 414 aa6.79□□□□□ -1.32
CD44-214ENST00000525211 C17orf53Q8N3J3 647 aaPredicted RBP6.79□□□□□ -1.32
CD44-214ENST00000525211 DQX1Q8TE96 717 aaKnown RBP6.79□□□□□ -1.32
CD44-214ENST00000525211 FGF13Q92913 245 aa6.79□□□□□ -1.32
CD44-214ENST00000525211 FGF14Q92915 247 aa6.79□□□□□ -1.32
CD44-214ENST00000525211 PPP2R3CQ969Q6 453 aa6.79□□□□□ -1.32
CD44-214ENST00000525211 ZNF653Q96CK0 615 aa6.79□□□□□ -1.32
CD44-214ENST00000525211 C18orf8Q96DM3 657 aa6.79□□□□□ -1.32
CD44-214ENST00000525211 IQCDQ96DY2 449 aa6.79□□□□□ -1.32
CD44-214ENST00000525211 ASIC4Q96FT7 647 aa6.79□□□□□ -1.32
CD44-214ENST00000525211 CFAP57Q96MR6 1250 aa6.79□□□□□ -1.32
CD44-214ENST00000525211 SLC2A13Q96QE2 648 aa6.79□□□□□ -1.32
CD44-214ENST00000525211 TBCBQ99426 244 aa6.79□□□□□ -1.32
CD44-214ENST00000525211 KLF16Q9BXK1 252 aaPredicted RBP6.79□□□□□ -1.32
CD44-214ENST00000525211 NUCKS1Q9H1E3 243 aaKnown RBP6.79□□□□□ -1.32
CD44-214ENST00000525211 GOLPH3Q9H4A6 298 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms