RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 TMEM51Q9NW97 253 aa7.42□□□□□ -1.22
VPS11-201ENST00000524454 MUTYHQ9UIF7 546 aa7.42□□□□□ -1.22
VPS11-201ENST00000524454 PACSIN2Q9UNF0 486 aaPredicted RBP7.42□□□□□ -1.22
VPS11-201ENST00000524454 FAM50BQ9Y247 325 aa7.42□□□□□ -1.22
VPS11-201ENST00000524454 FCF1Q9Y324 198 aaKnown RBP7.42□□□□□ -1.22
VPS11-201ENST00000524454 TIMM13Q9Y5L4 95 aaPredicted RBP7.42□□□□□ -1.22
VPS11-201ENST00000524454 CCDC195A0A1B0GUA6 201 aa7.41□□□□□ -1.22
VPS11-201ENST00000524454 C2CD4DB7Z1M9 353 aa7.41□□□□□ -1.22
VPS11-201ENST00000524454 ZNF189O75820 626 aaPredicted RBP7.41□□□□□ -1.22
VPS11-201ENST00000524454 ADH1AP07327 375 aa7.41□□□□□ -1.22
VPS11-201ENST00000524454 KRT7P08729 469 aa7.41□□□□□ -1.22
VPS11-201ENST00000524454 HOXB8P17481 243 aaPredicted RBP7.41□□□□□ -1.22
VPS11-201ENST00000524454 CD58P19256 250 aa7.41□□□□□ -1.22
VPS11-201ENST00000524454 FGFR3P22607 806 aa7.41□□□□□ -1.22
VPS11-201ENST00000524454 OR1D2P34982 312 aa7.41□□□□□ -1.22
VPS11-201ENST00000524454 PCK1P35558 622 aa7.41□□□□□ -1.22
VPS11-201ENST00000524454 GGCXP38435 758 aa7.41□□□□□ -1.22
VPS11-201ENST00000524454 GPD2P43304 727 aa7.41□□□□□ -1.22
VPS11-201ENST00000524454 TAF6P49848 677 aa7.41□□□□□ -1.22
VPS11-201ENST00000524454 LMNB2Q03252 620 aa7.41□□□□□ -1.22
VPS11-201ENST00000524454 PDCLQ13371 301 aa7.41□□□□□ -1.22
VPS11-201ENST00000524454 MTMR3Q13615 1198 aa7.41□□□□□ -1.22
VPS11-201ENST00000524454 CASP8Q14790 479 aa7.41□□□□□ -1.22
VPS11-201ENST00000524454 PKDCCQ504Y2 493 aa7.41□□□□□ -1.22
VPS11-201ENST00000524454 ALS2CLQ60I27 953 aa7.41□□□□□ -1.22
VPS11-201ENST00000524454 MMS22LQ6ZRQ5 1243 aa7.41□□□□□ -1.22
VPS11-201ENST00000524454 CEP128Q6ZU80 1094 aa7.41□□□□□ -1.22
VPS11-201ENST00000524454 SLC13A5Q86YT5 568 aaPredicted RBP7.41□□□□□ -1.22
VPS11-201ENST00000524454 RNF135Q8IUD6 432 aa7.41□□□□□ -1.22
VPS11-201ENST00000524454 RCOR2Q8IZ40 523 aa7.41□□□□□ -1.22
VPS11-201ENST00000524454 KREMEN2Q8NCW0 462 aa7.41□□□□□ -1.22
VPS11-201ENST00000524454 CCHCR1Q8TD31 782 aa7.41□□□□□ -1.22
VPS11-201ENST00000524454 CPA5Q8WXQ8 436 aa7.41□□□□□ -1.22
VPS11-201ENST00000524454 PIK3R5Q8WYR1 880 aa7.41□□□□□ -1.22
VPS11-201ENST00000524454 C18orf8Q96DM3 657 aa7.41□□□□□ -1.22
VPS11-201ENST00000524454 MS4A14Q96JA4 679 aa7.41□□□□□ -1.22
VPS11-201ENST00000524454 TNIP3Q96KP6 325 aa7.41□□□□□ -1.22
VPS11-201ENST00000524454 KRT12Q99456 494 aa7.41□□□□□ -1.22
VPS11-201ENST00000524454 C11orf70Q9BRQ4 267 aa7.41□□□□□ -1.22
VPS11-201ENST00000524454 PHF7Q9BWX1 381 aaPredicted RBP7.41□□□□□ -1.22
VPS11-201ENST00000524454 ADAM7Q9H2U9 754 aa7.41□□□□□ -1.22
VPS11-201ENST00000524454 SMOC2Q9H3U7 446 aa7.41□□□□□ -1.22
VPS11-201ENST00000524454 SMYD3Q9H7B4 428 aa7.41□□□□□ -1.22
VPS11-201ENST00000524454 SFXN1Q9H9B4 322 aa7.41□□□□□ -1.22
VPS11-201ENST00000524454 PRDM16Q9HAZ2 1276 aa7.41□□□□□ -1.22
VPS11-201ENST00000524454 DZANK1Q9NVP4 752 aa7.41□□□□□ -1.22
VPS11-201ENST00000524454 NXF1Q9UBU9 619 aaKnown RBP7.41□□□□□ -1.22
VPS11-201ENST00000524454 PRKAG3Q9UGI9 489 aa7.41□□□□□ -1.22
VPS11-201ENST00000524454 RAPGEFL1Q9UHV5 662 aa7.41□□□□□ -1.22
VPS11-201ENST00000524454 DMGDHQ9UI17 866 aaKnown RBP7.41□□□□□ -1.22
VPS11-201ENST00000524454 SSX2IPQ9Y2D8 614 aa7.41□□□□□ -1.22
VPS11-201ENST00000524454 UTP11Q9Y3A2 253 aaKnown RBP7.41□□□□□ -1.22
VPS11-201ENST00000524454 CDY1Q9Y6F8 540 aa7.41□□□□□ -1.22
VPS11-201ENST00000524454 KPNA7A9QM74 516 aa7.4□□□□□ -1.22
VPS11-201ENST00000524454 LOC730098B7Z3J9 87 aa7.4□□□□□ -1.22
VPS11-201ENST00000524454 TMEM189-UBE2V1I3L0A0 370 aa7.4□□□□□ -1.22
VPS11-201ENST00000524454 CCL16O15467 120 aa7.4□□□□□ -1.22
VPS11-201ENST00000524454 RAD51CO43502 376 aa7.4□□□□□ -1.22
VPS11-201ENST00000524454 ASGR2P07307 311 aa7.4□□□□□ -1.22
VPS11-201ENST00000524454 OR4Q2P0C623 313 aa7.4□□□□□ -1.22
VPS11-201ENST00000524454 KRT3P12035 628 aa7.4□□□□□ -1.22
VPS11-201ENST00000524454 CD19P15391 556 aa7.4□□□□□ -1.22
VPS11-201ENST00000524454 WARSP23381 471 aaKnown RBP7.4□□□□□ -1.22
VPS11-201ENST00000524454 BRD2P25440 801 aaKnown RBP7.4□□□□□ -1.22
VPS11-201ENST00000524454 ACADSBP45954 432 aa7.4□□□□□ -1.22
VPS11-201ENST00000524454 NDST1P52848 882 aa7.4□□□□□ -1.22
VPS11-201ENST00000524454 BCAT1P54687 386 aa7.4□□□□□ -1.22
VPS11-201ENST00000524454 NTHL1P78549 312 aa7.4□□□□□ -1.22
VPS11-201ENST00000524454 DR1Q01658 176 aa7.4□□□□□ -1.22
VPS11-201ENST00000524454 CAV1Q03135 178 aa7.4□□□□□ -1.22
VPS11-201ENST00000524454 GABPB1Q06547 395 aaPredicted RBP7.4□□□□□ -1.22
VPS11-201ENST00000524454 ELAVL2Q12926 359 aaKnown RBP7.4□□□□□ -1.22
VPS11-201ENST00000524454 KLF1Q13351 362 aaPredicted RBP7.4□□□□□ -1.22
VPS11-201ENST00000524454 CCNG2Q16589 344 aa7.4□□□□□ -1.22
VPS11-201ENST00000524454 TAZQ16635 292 aa7.4□□□□□ -1.22
VPS11-201ENST00000524454 HADHQ16836 314 aaKnown RBP7.4□□□□□ -1.22
VPS11-201ENST00000524454 PTPN20Q4JDL3 420 aa7.4□□□□□ -1.22
VPS11-201ENST00000524454 CES5AQ6NT32 575 aa7.4□□□□□ -1.22
VPS11-201ENST00000524454 DCUN1D2Q6PH85 259 aa7.4□□□□□ -1.22
VPS11-201ENST00000524454 LILRA6Q6PI73 481 aa7.4□□□□□ -1.22
VPS11-201ENST00000524454 SCARA5Q6ZMJ2 495 aa7.4□□□□□ -1.22
VPS11-201ENST00000524454 TMEM110Q86TL2 294 aa7.4□□□□□ -1.22
VPS11-201ENST00000524454 WDTC1Q8N5D0 677 aa7.4□□□□□ -1.22
VPS11-201ENST00000524454 APPL2Q8NEU8 664 aa7.4□□□□□ -1.22
VPS11-201ENST00000524454 TFAP2BQ92481 460 aa7.4□□□□□ -1.22
VPS11-201ENST00000524454 KRT35Q92764 455 aa7.4□□□□□ -1.22
VPS11-201ENST00000524454 ZNF707Q96C28 371 aaPredicted RBP7.4□□□□□ -1.22
VPS11-201ENST00000524454 LRRC45Q96CN5 670 aa7.4□□□□□ -1.22
VPS11-201ENST00000524454 SUSD3Q96L08 255 aa7.4□□□□□ -1.22
VPS11-201ENST00000524454 HSFY1Q96LI6 401 aa7.4□□□□□ -1.22
VPS11-201ENST00000524454 RIPOR3Q96MK2 946 aa7.4□□□□□ -1.22
VPS11-201ENST00000524454 TBCBQ99426 244 aa7.4□□□□□ -1.22
VPS11-201ENST00000524454 ERP44Q9BS26 406 aa7.4□□□□□ -1.22
VPS11-201ENST00000524454 CNPY3Q9BT09 278 aa7.4□□□□□ -1.22
VPS11-201ENST00000524454 FOXP3Q9BZS1 431 aa7.4□□□□□ -1.22
VPS11-201ENST00000524454 ELOVL4Q9GZR5 314 aa7.4□□□□□ -1.22
VPS11-201ENST00000524454 SDCBP2Q9H190 292 aa7.4□□□□□ -1.22
VPS11-201ENST00000524454 GOLPH3Q9H4A6 298 aa7.4□□□□□ -1.22
VPS11-201ENST00000524454 C11orf16Q9NQ32 467 aa7.4□□□□□ -1.22
VPS11-201ENST00000524454 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms