RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 SYT11Q9BT88 431 aa13.42□□□□□ -0.26
VEGFA-224ENST00000523873 EDEM3Q9BZQ6 932 aa13.42□□□□□ -0.26
VEGFA-224ENST00000523873 ARHGEF3Q9NR81 526 aa13.42□□□□□ -0.26
VEGFA-224ENST00000523873 ABCC13Q9NSE7 274 aa13.42□□□□□ -0.26
VEGFA-224ENST00000523873 THG1LQ9NWX6 298 aaKnown RBP13.42□□□□□ -0.26
VEGFA-224ENST00000523873 AIPL1Q9NZN9 384 aa13.42□□□□□ -0.26
VEGFA-224ENST00000523873 WNT16Q9UBV4 365 aa13.42□□□□□ -0.26
VEGFA-224ENST00000523873 CAPN11Q9UMQ6 739 aa13.42□□□□□ -0.26
VEGFA-224ENST00000523873 SH3BP1Q9Y3L3 701 aa13.42□□□□□ -0.26
VEGFA-224ENST00000523873 SHISA7A6NL88 538 aa13.41□□□□□ -0.26
VEGFA-224ENST00000523873 TMCO5BA8MYB1 307 aa13.41□□□□□ -0.26
VEGFA-224ENST00000523873 GOLGA8SH3BPF8 625 aa13.41□□□□□ -0.26
VEGFA-224ENST00000523873 GREM1O60565 184 aa13.41□□□□□ -0.26
VEGFA-224ENST00000523873 STC2O76061 302 aa13.41□□□□□ -0.26
VEGFA-224ENST00000523873 GJB6O95452 261 aa13.41□□□□□ -0.26
VEGFA-224ENST00000523873 LSM8O95777 96 aaKnown RBP13.41□□□□□ -0.26
VEGFA-224ENST00000523873 PLEKP08567 350 aaPredicted RBP13.41□□□□□ -0.26
VEGFA-224ENST00000523873 UNGP13051 313 aaPredicted RBP13.41□□□□□ -0.26
VEGFA-224ENST00000523873 NCAM1P13591 858 aa13.41□□□□□ -0.26
VEGFA-224ENST00000523873 TNFAIP3P21580 790 aa13.41□□□□□ -0.26
VEGFA-224ENST00000523873 CD72P21854 359 aa13.41□□□□□ -0.26
VEGFA-224ENST00000523873 PITX1P78337 314 aaPredicted RBP13.41□□□□□ -0.26
VEGFA-224ENST00000523873 ZBED6P86452 979 aa13.41□□□□□ -0.26
VEGFA-224ENST00000523873 KLHL30Q0D2K2 578 aa13.41□□□□□ -0.26
VEGFA-224ENST00000523873 MLF2Q15773 248 aaPredicted RBP13.41□□□□□ -0.26
VEGFA-224ENST00000523873 CLEC16AQ2KHT3 1053 aa13.41□□□□□ -0.26
VEGFA-224ENST00000523873 EML3Q32P44 896 aa13.41□□□□□ -0.26
VEGFA-224ENST00000523873 SPECC1LQ69YQ0 1117 aa13.41□□□□□ -0.26
VEGFA-224ENST00000523873 KLHDC10Q6PID8 442 aa13.41□□□□□ -0.26
VEGFA-224ENST00000523873 TRIM72Q6ZMU5 477 aa13.41□□□□□ -0.26
VEGFA-224ENST00000523873 TPRG1Q6ZUI0 275 aa13.41□□□□□ -0.26
VEGFA-224ENST00000523873 TMC6Q7Z403 805 aa13.41□□□□□ -0.26
VEGFA-224ENST00000523873 TADA2BQ86TJ2 420 aa13.41□□□□□ -0.26
VEGFA-224ENST00000523873 DDX42Q86XP3 938 aaKnown RBP eCLIP13.41□□□□□ -0.265e-7■■■■□ 19.9
VEGFA-224ENST00000523873 XYLT1Q86Y38 959 aa13.41□□□□□ -0.26
VEGFA-224ENST00000523873 FMNL3Q8IVF7 1028 aa13.41□□□□□ -0.26
VEGFA-224ENST00000523873 BBS7Q8IWZ6 715 aa13.41□□□□□ -0.26
VEGFA-224ENST00000523873 ZNF276Q8N554 614 aa13.41□□□□□ -0.26
VEGFA-224ENST00000523873 CSGALNACT1Q8TDX6 532 aa13.41□□□□□ -0.26
VEGFA-224ENST00000523873 OSCP1Q8WVF1 389 aa13.41□□□□□ -0.26
VEGFA-224ENST00000523873 GOLGA1Q92805 767 aa13.41□□□□□ -0.26
VEGFA-224ENST00000523873 DNASE1L2Q92874 299 aa13.41□□□□□ -0.26
VEGFA-224ENST00000523873 TAS2R14Q9NYV8 317 aa13.41□□□□□ -0.26
VEGFA-224ENST00000523873 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.41□□□□□ -0.265e-11■□□□□ 9.1
VEGFA-224ENST00000523873 KLKB1P03952 638 aa13.4□□□□□ -0.26
VEGFA-224ENST00000523873 CCDC172P0C7W6 258 aa13.4□□□□□ -0.26
VEGFA-224ENST00000523873 PRKCIP41743 596 aa13.4□□□□□ -0.26
VEGFA-224ENST00000523873 GABRB2P47870 512 aa13.4□□□□□ -0.26
VEGFA-224ENST00000523873 ZNF75DP51815 510 aa13.4□□□□□ -0.26
VEGFA-224ENST00000523873 KPNA1P52294 538 aaPredicted RBP13.4□□□□□ -0.26
VEGFA-224ENST00000523873 PFKPQ01813 784 aa13.4□□□□□ -0.26
VEGFA-224ENST00000523873 SLC6A3Q01959 620 aa13.4□□□□□ -0.26
VEGFA-224ENST00000523873 PTP4A2Q12974 167 aa13.4□□□□□ -0.26
VEGFA-224ENST00000523873 RUNX3Q13761 415 aa13.4□□□□□ -0.26
VEGFA-224ENST00000523873 HGSNATQ68CP4 663 aa13.4□□□□□ -0.26
VEGFA-224ENST00000523873 NAIF1Q69YI7 327 aaPredicted RBP13.4□□□□□ -0.26
VEGFA-224ENST00000523873 MSANTD2Q6P1R3 559 aa13.4□□□□□ -0.26
VEGFA-224ENST00000523873 TAC4Q86UU9 113 aa13.4□□□□□ -0.26
VEGFA-224ENST00000523873 DEFB106AQ8N104 65 aa13.4□□□□□ -0.26
VEGFA-224ENST00000523873 FLCNQ8NFG4 579 aa13.4□□□□□ -0.26
VEGFA-224ENST00000523873 DQX1Q8TE96 717 aaKnown RBP13.4□□□□□ -0.26
VEGFA-224ENST00000523873 C18orf8Q96DM3 657 aa13.4□□□□□ -0.26
VEGFA-224ENST00000523873 CDK5RAP1Q96SZ6 601 aaKnown RBP13.4□□□□□ -0.26
VEGFA-224ENST00000523873 OLA1Q9NTK5 396 aaKnown RBP13.4□□□□□ -0.26
VEGFA-224ENST00000523873 STRIP2Q9ULQ0 834 aa13.4□□□□□ -0.26
VEGFA-224ENST00000523873 LUC7L2Q9Y383 392 aaKnown RBP13.4□□□□□ -0.26
VEGFA-224ENST00000523873 PIAS3Q9Y6X2 628 aa13.4□□□□□ -0.26
VEGFA-224ENST00000523873 F5P12259 2224 aa13.4□□□□□ -0.26
VEGFA-224ENST00000523873 SYNJ2BP-COX16A0A087WUM0 186 aa13.39□□□□□ -0.27
VEGFA-224ENST00000523873 E2F8A0AVK6 867 aa13.39□□□□□ -0.27
VEGFA-224ENST00000523873 DDX3XO00571 662 aaKnown RBP eCLIP13.39□□□□□ -0.271e-15■□□□□ 9.6
VEGFA-224ENST00000523873 CAPN9O14815 690 aa13.39□□□□□ -0.27
VEGFA-224ENST00000523873 SART1O43290 800 aaKnown RBP13.39□□□□□ -0.27
VEGFA-224ENST00000523873 DAB1O75553 588 aa13.39□□□□□ -0.27
VEGFA-224ENST00000523873 MMP8P22894 467 aa13.39□□□□□ -0.27
VEGFA-224ENST00000523873 NSFP46459 744 aaKnown RBP13.39□□□□□ -0.27
VEGFA-224ENST00000523873 VCPP55072 806 aaKnown RBP13.39□□□□□ -0.27
VEGFA-224ENST00000523873 RNASE9P60153 205 aaKnown RBP13.39□□□□□ -0.27
VEGFA-224ENST00000523873 YWHAZP63104 245 aaKnown RBP13.39□□□□□ -0.27
VEGFA-224ENST00000523873 CENPCQ03188 943 aa13.39□□□□□ -0.27
VEGFA-224ENST00000523873 PDGFRLQ15198 375 aa13.39□□□□□ -0.27
VEGFA-224ENST00000523873 ITPRIPL2Q3MIP1 535 aa13.39□□□□□ -0.27
VEGFA-224ENST00000523873 TDRD12Q587J7 1177 aaKnown RBP13.39□□□□□ -0.27
VEGFA-224ENST00000523873 DCAF6Q58WW2 860 aa13.39□□□□□ -0.27
VEGFA-224ENST00000523873 FAM102AQ5T9C2 384 aaPredicted RBP13.39□□□□□ -0.27
VEGFA-224ENST00000523873 CWF19L1Q69YN2 538 aaKnown RBP13.39□□□□□ -0.27
VEGFA-224ENST00000523873 TRNP1Q6NT89 227 aa13.39□□□□□ -0.27
VEGFA-224ENST00000523873 TXNDC11Q6PKC3 985 aa13.39□□□□□ -0.27
VEGFA-224ENST00000523873 Q6ZNB5 142 aa13.39□□□□□ -0.27
VEGFA-224ENST00000523873 ZNF397Q8NF99 534 aaPredicted RBP13.39□□□□□ -0.27
VEGFA-224ENST00000523873 PBXIP1Q96AQ6 731 aa13.39□□□□□ -0.27
VEGFA-224ENST00000523873 CHFRQ96EP1 664 aa13.39□□□□□ -0.27
VEGFA-224ENST00000523873 SLC2A13Q96QE2 648 aa13.39□□□□□ -0.27
VEGFA-224ENST00000523873 FOXQ1Q9C009 403 aa13.39□□□□□ -0.27
VEGFA-224ENST00000523873 MFSD1Q9H3U5 465 aa13.39□□□□□ -0.27
VEGFA-224ENST00000523873 ECT2Q9H8V3 914 aa13.39□□□□□ -0.27
VEGFA-224ENST00000523873 TBC1D17Q9HA65 648 aa13.39□□□□□ -0.27
VEGFA-224ENST00000523873 POPDC2Q9HBU9 364 aa13.39□□□□□ -0.27
VEGFA-224ENST00000523873 METTL5Q9NRN9 209 aaKnown RBP13.39□□□□□ -0.27
VEGFA-224ENST00000523873 COX16Q9P0S2 106 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms