RNA–Protein interactions for RNA: ENST00000523824.5

NSMCE2-213, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-213ENST00000523824 NEFLP07196 543 aa8.39□□□□□ -1.07
NSMCE2-213ENST00000523824 ATXN1LP0C7T5 689 aaKnown RBP8.39□□□□□ -1.07
NSMCE2-213ENST00000523824 ZDHHC11BP0C7U3 371 aa8.39□□□□□ -1.07
NSMCE2-213ENST00000523824 ZNF883P0CG24 379 aa8.39□□□□□ -1.07
NSMCE2-213ENST00000523824 OXTRP30559 389 aa8.39□□□□□ -1.07
NSMCE2-213ENST00000523824 ATICP31939 592 aa8.39□□□□□ -1.07
NSMCE2-213ENST00000523824 ATP5C1P36542 298 aaKnown RBP8.39□□□□□ -1.07
NSMCE2-213ENST00000523824 STAT6P42226 847 aa8.39□□□□□ -1.07
NSMCE2-213ENST00000523824 HLA-BQ31612 363 aa8.39□□□□□ -1.07
NSMCE2-213ENST00000523824 DCAF12L1Q5VU92 463 aa8.39□□□□□ -1.07
NSMCE2-213ENST00000523824 CCDC73Q6ZRK6 1079 aa8.39□□□□□ -1.07
NSMCE2-213ENST00000523824 METTL3Q86U44 580 aaKnown RBP8.39□□□□□ -1.07
NSMCE2-213ENST00000523824 CCDC65Q8IXS2 484 aa8.39□□□□□ -1.07
NSMCE2-213ENST00000523824 GALNT15Q8N3T1 639 aa8.39□□□□□ -1.07
NSMCE2-213ENST00000523824 CADM4Q8NFZ8 388 aa8.39□□□□□ -1.07
NSMCE2-213ENST00000523824 BHMTQ93088 406 aa8.39□□□□□ -1.07
NSMCE2-213ENST00000523824 CCDC127Q96BQ5 260 aa8.39□□□□□ -1.07
NSMCE2-213ENST00000523824 TNIP3Q96KP6 325 aa8.39□□□□□ -1.07
NSMCE2-213ENST00000523824 CLIC6Q96NY7 704 aa8.39□□□□□ -1.07
NSMCE2-213ENST00000523824 CGRRF1Q99675 332 aa8.39□□□□□ -1.07
NSMCE2-213ENST00000523824 ITM2CQ9NQX7 267 aa8.39□□□□□ -1.07
NSMCE2-213ENST00000523824 TLR8Q9NR97 1041 aaKnown RBP8.39□□□□□ -1.07
NSMCE2-213ENST00000523824 WSB2Q9NYS7 404 aaPredicted RBP8.39□□□□□ -1.07
NSMCE2-213ENST00000523824 IL37Q9NZH6 218 aa8.39□□□□□ -1.07
NSMCE2-213ENST00000523824 MARK1Q9P0L2 795 aa8.39□□□□□ -1.07
NSMCE2-213ENST00000523824 DKK4Q9UBT3 224 aa8.39□□□□□ -1.07
NSMCE2-213ENST00000523824 NFE2L3Q9Y4A8 694 aa8.39□□□□□ -1.07
NSMCE2-213ENST00000523824 SRPRBQ9Y5M8 271 aaKnown RBP8.39□□□□□ -1.07
NSMCE2-213ENST00000523824 STON1Q9Y6Q2 735 aa8.39□□□□□ -1.07
NSMCE2-213ENST00000523824 MYOFQ9NZM1 2061 aa8.39□□□□□ -1.07
NSMCE2-213ENST00000523824 LOC400499M0QZD8 3231 aa8.38□□□□□ -1.07
NSMCE2-213ENST00000523824 FAM92AA1XBS5 289 aa8.38□□□□□ -1.07
NSMCE2-213ENST00000523824 METTL12A8MUP2 240 aa8.38□□□□□ -1.07
NSMCE2-213ENST00000523824 KCNJ18B7U540 433 aa8.38□□□□□ -1.07
NSMCE2-213ENST00000523824 FLRT2O43155 660 aa8.38□□□□□ -1.07
NSMCE2-213ENST00000523824 SYNCRIPO60506 623 aaKnown RBP8.38□□□□□ -1.07
NSMCE2-213ENST00000523824 CISD3P0C7P0 127 aa8.38□□□□□ -1.07
NSMCE2-213ENST00000523824 ACADMP11310 421 aa8.38□□□□□ -1.07
NSMCE2-213ENST00000523824 PSEN1P49768 467 aa8.38□□□□□ -1.07
NSMCE2-213ENST00000523824 ZNF132P52740 706 aa8.38□□□□□ -1.07
NSMCE2-213ENST00000523824 CDH8P55286 799 aa8.38□□□□□ -1.07
NSMCE2-213ENST00000523824 MYL6P60660 151 aa8.38□□□□□ -1.07
NSMCE2-213ENST00000523824 C19orf57Q0VDD7 668 aa8.38□□□□□ -1.07
NSMCE2-213ENST00000523824 PSMD6Q15008 389 aa8.38□□□□□ -1.07
NSMCE2-213ENST00000523824 RABEP1Q15276 862 aa8.38□□□□□ -1.07
NSMCE2-213ENST00000523824 SNRNP35Q16560 246 aaKnown RBP8.38□□□□□ -1.07
NSMCE2-213ENST00000523824 FUT11Q495W5 492 aa8.38□□□□□ -1.07
NSMCE2-213ENST00000523824 CCDC157Q569K6 752 aa8.38□□□□□ -1.07
NSMCE2-213ENST00000523824 PAQR9Q6ZVX9 377 aa8.38□□□□□ -1.07
NSMCE2-213ENST00000523824 FAM35AQ86V20 835 aa8.38□□□□□ -1.07
NSMCE2-213ENST00000523824 MARCH9Q86YJ5 346 aa8.38□□□□□ -1.07
NSMCE2-213ENST00000523824 TMPRSS6Q8IU80 811 aa8.38□□□□□ -1.07
NSMCE2-213ENST00000523824 SCUBE3Q8IX30 993 aa8.38□□□□□ -1.07
NSMCE2-213ENST00000523824 PRCCQ92733 491 aaPredicted RBP8.38□□□□□ -1.07
NSMCE2-213ENST00000523824 SYAP1Q96A49 352 aaPredicted RBP8.38□□□□□ -1.07
NSMCE2-213ENST00000523824 SIPA1Q96FS4 1042 aa8.38□□□□□ -1.07
NSMCE2-213ENST00000523824 SMARCD1Q96GM5 515 aa8.38□□□□□ -1.07
NSMCE2-213ENST00000523824 NUP58Q9BVL2 599 aa8.38□□□□□ -1.07
NSMCE2-213ENST00000523824 KLF16Q9BXK1 252 aaPredicted RBP8.38□□□□□ -1.07
NSMCE2-213ENST00000523824 TRIM9Q9C026 710 aa8.38□□□□□ -1.07
NSMCE2-213ENST00000523824 FBXO44Q9H4M3 255 aa8.38□□□□□ -1.07
NSMCE2-213ENST00000523824 TOR4AQ9NXH8 423 aa8.38□□□□□ -1.07
NSMCE2-213ENST00000523824 PLK2Q9NYY3 685 aa8.38□□□□□ -1.07
NSMCE2-213ENST00000523824 EIF2B4Q9UI10 523 aaKnown RBP8.38□□□□□ -1.07
NSMCE2-213ENST00000523824 FBXO2Q9UK22 296 aaPredicted RBP8.38□□□□□ -1.07
NSMCE2-213ENST00000523824 FNDC3AQ9Y2H6 1198 aaKnown RBP8.38□□□□□ -1.07
NSMCE2-213ENST00000523824 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.38□□□□□ -1.07
NSMCE2-213ENST00000523824 PCDHGB2Q9Y5G2 931 aa8.38□□□□□ -1.07
NSMCE2-213ENST00000523824 CLIC4Q9Y696 253 aa8.38□□□□□ -1.07
NSMCE2-213ENST00000523824 APC2O95996 2303 aa8.38□□□□□ -1.07
NSMCE2-213ENST00000523824 ACACAQ13085 2346 aa8.38□□□□□ -1.07
NSMCE2-213ENST00000523824 CEP192Q8TEP8 1941 aa8.38□□□□□ -1.07
NSMCE2-213ENST00000523824 MYO18AQ92614 2054 aaKnown RBP8.38□□□□□ -1.07
NSMCE2-213ENST00000523824 A0A1B0GVT2 93 aa8.37□□□□□ -1.07
NSMCE2-213ENST00000523824 FAM149AA5PLN7 773 aa8.37□□□□□ -1.07
NSMCE2-213ENST00000523824 NPC1O15118 1278 aa8.37□□□□□ -1.07
NSMCE2-213ENST00000523824 CLIC2O15247 247 aa8.37□□□□□ -1.07
NSMCE2-213ENST00000523824 GREM1O60565 184 aa8.37□□□□□ -1.07
NSMCE2-213ENST00000523824 STAU1O95793 577 aaKnown RBP8.37□□□□□ -1.07
NSMCE2-213ENST00000523824 IL12RB1P42701 662 aa8.37□□□□□ -1.07
NSMCE2-213ENST00000523824 PLA2G4AP47712 749 aa8.37□□□□□ -1.07
NSMCE2-213ENST00000523824 PGFP49763 221 aa8.37□□□□□ -1.07
NSMCE2-213ENST00000523824 TPMTP51580 245 aa8.37□□□□□ -1.07
NSMCE2-213ENST00000523824 CYP2J2P51589 502 aa8.37□□□□□ -1.07
NSMCE2-213ENST00000523824 MAP3K7CLP57077 242 aa8.37□□□□□ -1.07
NSMCE2-213ENST00000523824 CYP24A1Q07973 514 aa8.37□□□□□ -1.07
NSMCE2-213ENST00000523824 PDAP1Q13442 181 aaKnown RBP8.37□□□□□ -1.07
NSMCE2-213ENST00000523824 E2F5Q15329 346 aa8.37□□□□□ -1.07
NSMCE2-213ENST00000523824 DBX2Q6ZNG2 339 aa8.37□□□□□ -1.07
NSMCE2-213ENST00000523824 ACOT1Q86TX2 421 aa8.37□□□□□ -1.07
NSMCE2-213ENST00000523824 PDCD7Q8N8D1 485 aaKnown RBP8.37□□□□□ -1.07
NSMCE2-213ENST00000523824 XXYLT1Q8NBI6 393 aa8.37□□□□□ -1.07
NSMCE2-213ENST00000523824 ENGASEQ8NFI3 743 aa8.37□□□□□ -1.07
NSMCE2-213ENST00000523824 BAHD1Q8TBE0 780 aaPredicted RBP8.37□□□□□ -1.07
NSMCE2-213ENST00000523824 ADAM32Q8TC27 787 aa8.37□□□□□ -1.07
NSMCE2-213ENST00000523824 UCMAQ8WVF2 138 aa8.37□□□□□ -1.07
NSMCE2-213ENST00000523824 SNX19Q92543 992 aa8.37□□□□□ -1.07
NSMCE2-213ENST00000523824 ZNF516Q92618 1163 aa8.37□□□□□ -1.07
NSMCE2-213ENST00000523824 HPS3Q969F9 1004 aa8.37□□□□□ -1.07
NSMCE2-213ENST00000523824 CRELD1Q96HD1 420 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms