RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 SSX2IPQ9Y2D8 614 aa15.72■□□□□ 0.11
SREK1-209ENST00000520953 PCDHA3Q9Y5H8 950 aa15.72■□□□□ 0.11
SREK1-209ENST00000520953 UNC80Q8N2C7 3258 aa15.71■□□□□ 0.11
SREK1-209ENST00000520953 FAM92AA1XBS5 289 aa15.71■□□□□ 0.11
SREK1-209ENST00000520953 PI4K2BG5E9Z4 385 aa15.71■□□□□ 0.11
SREK1-209ENST00000520953 RFPL2O75678 378 aa15.71■□□□□ 0.11
SREK1-209ENST00000520953 PYGMP11217 842 aa15.71■□□□□ 0.11
SREK1-209ENST00000520953 CTNNA2P26232 953 aa15.71■□□□□ 0.11
SREK1-209ENST00000520953 ELF1P32519 619 aa15.71■□□□□ 0.11
SREK1-209ENST00000520953 SLC1A1P43005 524 aa15.71■□□□□ 0.11
SREK1-209ENST00000520953 NME3Q13232 169 aa15.71■□□□□ 0.11
SREK1-209ENST00000520953 PLD1Q13393 1074 aa15.71■□□□□ 0.11
SREK1-209ENST00000520953 RAB30Q15771 203 aa15.71■□□□□ 0.11
SREK1-209ENST00000520953 KCTD19Q17RG1 926 aaPredicted RBP15.71■□□□□ 0.11
SREK1-209ENST00000520953 SCYL2Q6P3W7 929 aa15.71■□□□□ 0.11
SREK1-209ENST00000520953 CREG2Q8IUH2 290 aa15.71■□□□□ 0.11
SREK1-209ENST00000520953 KRT222Q8N1A0 295 aa15.71■□□□□ 0.11
SREK1-209ENST00000520953 KREMEN2Q8NCW0 462 aa15.71■□□□□ 0.11
SREK1-209ENST00000520953 IRGQQ8WZA9 623 aa15.71■□□□□ 0.11
SREK1-209ENST00000520953 CALR3Q96L12 384 aaKnown RBP15.71■□□□□ 0.11
SREK1-209ENST00000520953 NPY6RQ99463 290 aa15.71■□□□□ 0.11
SREK1-209ENST00000520953 HERPUD2Q9BSE4 406 aa15.71■□□□□ 0.11
SREK1-209ENST00000520953 EMILIN2Q9BXX0 1053 aa15.71■□□□□ 0.11
SREK1-209ENST00000520953 ANLNQ9NQW6 1124 aa15.71■□□□□ 0.11
SREK1-209ENST00000520953 ASNSD1Q9NWL6 643 aa15.71■□□□□ 0.11
SREK1-209ENST00000520953 CCDC151A5D8V7 595 aa15.7■□□□□ 0.1
SREK1-209ENST00000520953 M0QYT0 321 aa15.7■□□□□ 0.1
SREK1-209ENST00000520953 CAPN9O14815 690 aa15.7■□□□□ 0.1
SREK1-209ENST00000520953 CLASP2O75122 1294 aaKnown RBP15.7■□□□□ 0.1
SREK1-209ENST00000520953 C8AP07357 584 aa15.7■□□□□ 0.1
SREK1-209ENST00000520953 NOS2P35228 1153 aa15.7■□□□□ 0.1
SREK1-209ENST00000520953 PTPN9P43378 593 aa15.7■□□□□ 0.1
SREK1-209ENST00000520953 ALDH1A3P47895 512 aa15.7■□□□□ 0.1
SREK1-209ENST00000520953 CREMQ03060 361 aa15.7■□□□□ 0.1
SREK1-209ENST00000520953 BRD3Q15059 726 aa15.7■□□□□ 0.1
SREK1-209ENST00000520953 ARCQ7LC44 396 aa15.7■□□□□ 0.1
SREK1-209ENST00000520953 TAC4Q86UU9 113 aa15.7■□□□□ 0.1
SREK1-209ENST00000520953 FAM131BQ86XD5 332 aa15.7■□□□□ 0.1
SREK1-209ENST00000520953 SCML4Q8N228 414 aa15.7■□□□□ 0.1
SREK1-209ENST00000520953 CENPIQ92674 756 aaPredicted RBP15.7■□□□□ 0.1
SREK1-209ENST00000520953 NT5C3BQ969T7 300 aa15.7■□□□□ 0.1
SREK1-209ENST00000520953 SAMD11Q96NU1 681 aa15.7■□□□□ 0.1
SREK1-209ENST00000520953 ZNF334Q9HCZ1 680 aaPredicted RBP15.7■□□□□ 0.1
SREK1-209ENST00000520953 PIGVQ9NUD9 493 aa15.7■□□□□ 0.1
SREK1-209ENST00000520953 SFMBT1Q9UHJ3 866 aa15.7■□□□□ 0.1
SREK1-209ENST00000520953 I6L893 689 aaPredicted RBP15.7■□□□□ 0.1
SREK1-209ENST00000520953 MSI1O43347 362 aaKnown RBP15.7■□□□□ 0.1
SREK1-209ENST00000520953 LPXNO60711 386 aa15.7■□□□□ 0.1
SREK1-209ENST00000520953 TRUB2O95900 331 aaKnown RBP15.7■□□□□ 0.1
SREK1-209ENST00000520953 GLUD1P00367 558 aa15.7■□□□□ 0.1
SREK1-209ENST00000520953 GLI1P08151 1106 aa15.7■□□□□ 0.1
SREK1-209ENST00000520953 CKAP4Q07065 602 aaKnown RBP15.7■□□□□ 0.1
SREK1-209ENST00000520953 CA9Q16790 459 aa15.7■□□□□ 0.1
SREK1-209ENST00000520953 SLC25A52Q3SY17 297 aa15.7■□□□□ 0.1
SREK1-209ENST00000520953 BNIPLQ7Z465 357 aa15.7■□□□□ 0.1
SREK1-209ENST00000520953 CCDC185Q8N715 623 aa15.7■□□□□ 0.1
SREK1-209ENST00000520953 DQX1Q8TE96 717 aaKnown RBP15.7■□□□□ 0.1
SREK1-209ENST00000520953 RAPGEF5Q92565 580 aa15.7■□□□□ 0.1
SREK1-209ENST00000520953 CASP10Q92851 521 aa15.7■□□□□ 0.1
SREK1-209ENST00000520953 TIFAQ96CG3 184 aa15.7■□□□□ 0.1
SREK1-209ENST00000520953 FBXO44Q9H4M3 255 aa15.7■□□□□ 0.1
SREK1-209ENST00000520953 ARFGAP3Q9NP61 516 aa15.7■□□□□ 0.1
SREK1-209ENST00000520953 USP18Q9UMW8 372 aa15.7■□□□□ 0.1
SREK1-209ENST00000520953 SART1O43290 800 aaKnown RBP15.69■□□□□ 0.1
SREK1-209ENST00000520953 CEP104O60308 925 aa15.69■□□□□ 0.1
SREK1-209ENST00000520953 SASH3O75995 380 aa15.69■□□□□ 0.1
SREK1-209ENST00000520953 CD48P09326 243 aa15.69■□□□□ 0.1
SREK1-209ENST00000520953 ZNF697Q5TEC3 545 aa15.69■□□□□ 0.1
SREK1-209ENST00000520953 BTBD8Q5XKL5 378 aa15.69■□□□□ 0.1
SREK1-209ENST00000520953 DNAJB7Q7Z6W7 309 aaPredicted RBP15.69■□□□□ 0.1
SREK1-209ENST00000520953 RHOT1Q8IXI2 618 aa15.69■□□□□ 0.1
SREK1-209ENST00000520953 HS6ST3Q8IZP7 471 aa15.69■□□□□ 0.1
SREK1-209ENST00000520953 RNF25Q96BH1 459 aaPredicted RBP15.69■□□□□ 0.1
SREK1-209ENST00000520953 TTLL2Q9BWV7 592 aa15.69■□□□□ 0.1
SREK1-209ENST00000520953 CCSER2Q9H7U1 834 aa15.69■□□□□ 0.1
SREK1-209ENST00000520953 TCRBV7S2A1N4TA0A589 114 aa15.69■□□□□ 0.1
SREK1-209ENST00000520953 CCL16O15467 120 aa15.69■□□□□ 0.1
SREK1-209ENST00000520953 RNF8O76064 485 aa15.69■□□□□ 0.1
SREK1-209ENST00000520953 RTN3O95197 1032 aaPredicted RBP15.69■□□□□ 0.1
SREK1-209ENST00000520953 RARAP10276 462 aa15.69■□□□□ 0.1
SREK1-209ENST00000520953 ZC3H12AQ5D1E8 599 aaKnown RBP15.69■□□□□ 0.1
SREK1-209ENST00000520953 ADAT2Q7Z6V5 191 aaKnown RBP15.69■□□□□ 0.1
SREK1-209ENST00000520953 TMEM150AQ86TG1 271 aa15.69■□□□□ 0.1
SREK1-209ENST00000520953 MON1AQ86VX9 555 aa15.69■□□□□ 0.1
SREK1-209ENST00000520953 HSPH1Q92598 858 aa15.69■□□□□ 0.1
SREK1-209ENST00000520953 MAN1C1Q9NR34 630 aa15.69■□□□□ 0.1
SREK1-209ENST00000520953 DDIT4Q9NX09 232 aa15.69■□□□□ 0.1
SREK1-209ENST00000520953 HSFX1Q9UBD0 423 aa15.69■□□□□ 0.1
SREK1-209ENST00000520953 CCDC66A2RUB6 948 aa15.68■□□□□ 0.1
SREK1-209ENST00000520953 MIF4GDA9UHW6 222 aaKnown RBP15.68■□□□□ 0.1
SREK1-209ENST00000520953 PRLRP16471 622 aa15.68■□□□□ 0.1
SREK1-209ENST00000520953 VSNL1P62760 191 aa15.68■□□□□ 0.1
SREK1-209ENST00000520953 LONRF2Q1L5Z9 754 aa15.68■□□□□ 0.1
SREK1-209ENST00000520953 UBL4BQ8N7F7 174 aa15.68■□□□□ 0.1
SREK1-209ENST00000520953 RPGRIP1Q96KN7 1286 aa15.68■□□□□ 0.1
SREK1-209ENST00000520953 FAM204AQ9H8W3 233 aa15.68■□□□□ 0.1
SREK1-209ENST00000520953 WDR6Q9NNW5 1121 aaKnown RBP15.68■□□□□ 0.1
SREK1-209ENST00000520953 HCFC1R1Q9NWW0 138 aa15.68■□□□□ 0.1
SREK1-209ENST00000520953 PRUNE2Q8WUY3 3088 aa15.68■□□□□ 0.1
SREK1-209ENST00000520953 ATP8B1O43520 1251 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms