RNA–Protein interactions for RNA: ENST00000520913.1

PVT1-209, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-209ENST00000520913 XPO6Q96QU8 1125 aaKnown RBP11.29□□□□□ -0.6
PVT1-209ENST00000520913 BBS2Q9BXC9 721 aa11.29□□□□□ -0.6
PVT1-209ENST00000520913 UBXN6Q9BZV1 441 aa11.29□□□□□ -0.6
PVT1-209ENST00000520913 ARRDC1-AS1Q9H2J1 176 aa11.29□□□□□ -0.6
PVT1-209ENST00000520913 POLMQ9NP87 494 aaPredicted RBP11.29□□□□□ -0.6
PVT1-209ENST00000520913 MARK1Q9P0L2 795 aa11.29□□□□□ -0.6
PVT1-209ENST00000520913 HESX1Q9UBX0 185 aa11.29□□□□□ -0.6
PVT1-209ENST00000520913 RASAL2Q9UJF2 1139 aa11.29□□□□□ -0.6
PVT1-209ENST00000520913 TSPAN16Q9UKR8 245 aa11.29□□□□□ -0.6
PVT1-209ENST00000520913 CTNND2Q9UQB3 1225 aa11.29□□□□□ -0.6
PVT1-209ENST00000520913 ABCA7Q8IZY2 2146 aa11.29□□□□□ -0.6
PVT1-209ENST00000520913 A0A0A0MRY4 1105 aa11.28□□□□□ -0.6
PVT1-209ENST00000520913 XPO1O14980 1071 aaKnown RBP11.28□□□□□ -0.6
PVT1-209ENST00000520913 PMM2O15305 246 aa11.28□□□□□ -0.6
PVT1-209ENST00000520913 STC2O76061 302 aa11.28□□□□□ -0.6
PVT1-209ENST00000520913 RHOBTB1O94844 696 aa11.28□□□□□ -0.6
PVT1-209ENST00000520913 SETSIPP0DME0 302 aa11.28□□□□□ -0.6
PVT1-209ENST00000520913 CHRM1P11229 460 aaPredicted RBP11.28□□□□□ -0.6
PVT1-209ENST00000520913 TYRP14679 529 aa11.28□□□□□ -0.6
PVT1-209ENST00000520913 CD19P15391 556 aa11.28□□□□□ -0.6
PVT1-209ENST00000520913 GBP1P32455 592 aa11.28□□□□□ -0.6
PVT1-209ENST00000520913 MPLP40238 635 aa11.28□□□□□ -0.6
PVT1-209ENST00000520913 PLA2G4AP47712 749 aa11.28□□□□□ -0.6
PVT1-209ENST00000520913 CETN1Q12798 172 aa11.28□□□□□ -0.6
PVT1-209ENST00000520913 AASDHQ4L235 1098 aaPredicted RBP11.28□□□□□ -0.6
PVT1-209ENST00000520913 USP39Q53GS9 565 aaKnown RBP11.28□□□□□ -0.6
PVT1-209ENST00000520913 C10orf76Q5T2E6 689 aa11.28□□□□□ -0.6
PVT1-209ENST00000520913 GRAMD4Q6IC98 578 aa11.28□□□□□ -0.6
PVT1-209ENST00000520913 TTI2Q6NXR4 508 aa11.28□□□□□ -0.6
PVT1-209ENST00000520913 Q6ZNB5 142 aa11.28□□□□□ -0.6
PVT1-209ENST00000520913 SCD5Q86SK9 330 aa11.28□□□□□ -0.6
PVT1-209ENST00000520913 TMEM25Q86YD3 366 aa11.28□□□□□ -0.6
PVT1-209ENST00000520913 MIB1Q86YT6 1006 aa11.28□□□□□ -0.6
PVT1-209ENST00000520913 CCDC33Q8N5R6 958 aa11.28□□□□□ -0.6
PVT1-209ENST00000520913 UBR7Q8N806 425 aa11.28□□□□□ -0.6
PVT1-209ENST00000520913 ZNF513Q8N8E2 541 aaPredicted RBP11.28□□□□□ -0.6
PVT1-209ENST00000520913 NAT16Q8N8M0 369 aa11.28□□□□□ -0.6
PVT1-209ENST00000520913 MDGA1Q8NFP4 955 aa11.28□□□□□ -0.6
PVT1-209ENST00000520913 KCNV2Q8TDN2 545 aa11.28□□□□□ -0.6
PVT1-209ENST00000520913 NELFBQ8WX92 580 aa11.28□□□□□ -0.6
PVT1-209ENST00000520913 SPACA7Q96KW9 195 aa11.28□□□□□ -0.6
PVT1-209ENST00000520913 NT5C1BQ96P26 610 aa11.28□□□□□ -0.6
PVT1-209ENST00000520913 DCLK3Q9C098 648 aa11.28□□□□□ -0.6
PVT1-209ENST00000520913 DUSP15Q9H1R2 295 aaPredicted RBP11.28□□□□□ -0.6
PVT1-209ENST00000520913 DNAJC17Q9NVM6 304 aaKnown RBP11.28□□□□□ -0.6
PVT1-209ENST00000520913 WDR35Q9P2L0 1181 aa11.28□□□□□ -0.6
PVT1-209ENST00000520913 NUDT5Q9UKK9 219 aa11.28□□□□□ -0.6
PVT1-209ENST00000520913 ZNF510Q9Y2H8 683 aa11.28□□□□□ -0.6
PVT1-209ENST00000520913 ADAMTS9Q9P2N4 1935 aa11.27□□□□□ -0.6
PVT1-209ENST00000520913 TP53BP1Q12888 1972 aaPredicted RBP11.27□□□□□ -0.61
PVT1-209ENST00000520913 SDK1Q7Z5N4 2213 aa11.27□□□□□ -0.61
PVT1-209ENST00000520913 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.27□□□□□ -0.61
PVT1-209ENST00000520913 TBC1D3BA6NDS4 549 aa11.27□□□□□ -0.61
PVT1-209ENST00000520913 ANTXRLA6NF34 631 aa11.27□□□□□ -0.61
PVT1-209ENST00000520913 SGK1O00141 431 aa11.27□□□□□ -0.61
PVT1-209ENST00000520913 SLC30A4O14863 429 aa11.27□□□□□ -0.61
PVT1-209ENST00000520913 P4HA2O15460 535 aa11.27□□□□□ -0.61
PVT1-209ENST00000520913 ZBED1O96006 694 aa11.27□□□□□ -0.61
PVT1-209ENST00000520913 PAEPP09466 180 aa11.27□□□□□ -0.61
PVT1-209ENST00000520913 ZNF806P0C7X5 589 aa11.27□□□□□ -0.61
PVT1-209ENST00000520913 VDRP11473 427 aa11.27□□□□□ -0.61
PVT1-209ENST00000520913 TKTL1P51854 596 aa11.27□□□□□ -0.61
PVT1-209ENST00000520913 ATXN1P54253 815 aaKnown RBP11.27□□□□□ -0.61
PVT1-209ENST00000520913 YWHAGP61981 247 aaKnown RBP eCLIP11.27□□□□□ -0.61
PVT1-209ENST00000520913 COG7P83436 770 aa11.27□□□□□ -0.61
PVT1-209ENST00000520913 PDE4CQ08493 712 aa11.27□□□□□ -0.61
PVT1-209ENST00000520913 EFEMP1Q12805 493 aa11.27□□□□□ -0.61
PVT1-209ENST00000520913 LRMPQ12912 555 aa11.27□□□□□ -0.61
PVT1-209ENST00000520913 PAK1Q13153 545 aa11.27□□□□□ -0.61
PVT1-209ENST00000520913 MORC3Q14149 939 aa11.27□□□□□ -0.61
PVT1-209ENST00000520913 PLA2G2CQ5R387 149 aa11.27□□□□□ -0.61
PVT1-209ENST00000520913 PMS2CLQ68D20 193 aa11.27□□□□□ -0.61
PVT1-209ENST00000520913 TMEM92Q6UXU6 159 aa11.27□□□□□ -0.61
PVT1-209ENST00000520913 TPGS1Q6ZTW0 290 aa11.27□□□□□ -0.61
PVT1-209ENST00000520913 RSRC2Q7L4I2 434 aaKnown RBP11.27□□□□□ -0.61
PVT1-209ENST00000520913 PPM1KQ8N3J5 372 aa11.27□□□□□ -0.61
PVT1-209ENST00000520913 ULBP1Q9BZM6 244 aa11.27□□□□□ -0.61
PVT1-209ENST00000520913 LRRC4Q9HBW1 653 aa11.27□□□□□ -0.61
PVT1-209ENST00000520913 OLA1Q9NTK5 396 aaKnown RBP11.27□□□□□ -0.61
PVT1-209ENST00000520913 BCCIPQ9P287 314 aaKnown RBP eCLIP11.27□□□□□ -0.61
PVT1-209ENST00000520913 STRIP2Q9ULQ0 834 aa11.27□□□□□ -0.61
PVT1-209ENST00000520913 PI4KAP42356 2102 aa11.26□□□□□ -0.61
PVT1-209ENST00000520913 TCRBV21S2A2A0A5A6 115 aa11.26□□□□□ -0.61
PVT1-209ENST00000520913 MED19A0JLT2 244 aaPredicted RBP11.26□□□□□ -0.61
PVT1-209ENST00000520913 PPP1R3GB7ZBB8 358 aa11.26□□□□□ -0.61
PVT1-209ENST00000520913 O00370 1275 aa11.26□□□□□ -0.61
PVT1-209ENST00000520913 BIN1O00499 593 aa11.26□□□□□ -0.61
PVT1-209ENST00000520913 DCLK1O15075 740 aa11.26□□□□□ -0.61
PVT1-209ENST00000520913 GADD45BO75293 160 aaPredicted RBP11.26□□□□□ -0.61
PVT1-209ENST00000520913 GNA14O95837 355 aa11.26□□□□□ -0.61
PVT1-209ENST00000520913 HOXB2P14652 356 aa11.26□□□□□ -0.61
PVT1-209ENST00000520913 HNRNPLP14866 589 aaKnown RBP eCLIP11.26□□□□□ -0.61
PVT1-209ENST00000520913 BMP6P22004 513 aa11.26□□□□□ -0.61
PVT1-209ENST00000520913 CORO1AP31146 461 aaKnown RBP11.26□□□□□ -0.61
PVT1-209ENST00000520913 CHKAP35790 457 aa11.26□□□□□ -0.61
PVT1-209ENST00000520913 DGKGP49619 791 aa11.26□□□□□ -0.61
PVT1-209ENST00000520913 MARSP56192 900 aaKnown RBP11.26□□□□□ -0.61
PVT1-209ENST00000520913 ADIGQ0VDE8 80 aa11.26□□□□□ -0.61
PVT1-209ENST00000520913 SF3A2Q15428 464 aaKnown RBP11.26□□□□□ -0.61
PVT1-209ENST00000520913 STILQ15468 1287 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms