RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 KBTBD12Q3ZCT8 623 aa11.78□□□□□ -0.52
CLK4-206ENST00000520878 DEPDC1BQ8WUY9 529 aa11.78□□□□□ -0.52
CLK4-206ENST00000520878 SLC35F5Q8WV83 523 aa11.78□□□□□ -0.52
CLK4-206ENST00000520878 APOL2Q9BQE5 337 aa11.78□□□□□ -0.52
CLK4-206ENST00000520878 KATNBL1Q9H079 304 aa11.78□□□□□ -0.52
CLK4-206ENST00000520878 NRDE2Q9H7Z3 1164 aa11.78□□□□□ -0.52
CLK4-206ENST00000520878 SLC38A7Q9NVC3 462 aa11.78□□□□□ -0.52
CLK4-206ENST00000520878 CCDC195A0A1B0GUA6 201 aa11.78□□□□□ -0.52
CLK4-206ENST00000520878 RBM47A0AV96 593 aaKnown RBP11.78□□□□□ -0.52
CLK4-206ENST00000520878 MYBPHLA2RUH7 354 aa11.78□□□□□ -0.52
CLK4-206ENST00000520878 H3BRJ5 948 aa11.78□□□□□ -0.52
CLK4-206ENST00000520878 OVGP1Q12889 678 aa11.78□□□□□ -0.52
CLK4-206ENST00000520878 HIC1Q14526 733 aa11.78□□□□□ -0.52
CLK4-206ENST00000520878 MROH9Q5TGP6 573 aa11.78□□□□□ -0.52
CLK4-206ENST00000520878 FYB2Q5VWT5 728 aa11.78□□□□□ -0.52
CLK4-206ENST00000520878 ZNF449Q6P9G9 518 aa11.78□□□□□ -0.52
CLK4-206ENST00000520878 SPATA21Q7Z572 469 aa11.78□□□□□ -0.52
CLK4-206ENST00000520878 IFNLR1Q8IU57 520 aaPredicted RBP11.78□□□□□ -0.52
CLK4-206ENST00000520878 A0A0G2JND7 137 aa11.78□□□□□ -0.52
CLK4-206ENST00000520878 ALOX15BO15296 676 aa11.78□□□□□ -0.52
CLK4-206ENST00000520878 ATP9BO43861 1147 aa11.78□□□□□ -0.52
CLK4-206ENST00000520878 USP12O75317 370 aa11.78□□□□□ -0.52
CLK4-206ENST00000520878 RPA3P35244 121 aaPredicted RBP11.78□□□□□ -0.52
CLK4-206ENST00000520878 GRIK1P39086 918 aa11.78□□□□□ -0.52
CLK4-206ENST00000520878 HDAC4P56524 1084 aa11.78□□□□□ -0.52
CLK4-206ENST00000520878 PITX1P78337 314 aaPredicted RBP11.78□□□□□ -0.52
CLK4-206ENST00000520878 TRIM32Q13049 653 aa11.78□□□□□ -0.52
CLK4-206ENST00000520878 TRNP1Q6NT89 227 aa11.78□□□□□ -0.52
CLK4-206ENST00000520878 OLFML1Q6UWY5 402 aa11.78□□□□□ -0.52
CLK4-206ENST00000520878 OSTM1Q86WC4 334 aa11.78□□□□□ -0.52
CLK4-206ENST00000520878 IFNL1Q8IU54 200 aa11.78□□□□□ -0.52
CLK4-206ENST00000520878 SOCS4Q8WXH5 440 aa11.78□□□□□ -0.52
CLK4-206ENST00000520878 SPOCK2Q92563 424 aa11.78□□□□□ -0.52
CLK4-206ENST00000520878 RHOBTB2Q9BYZ6 727 aa11.78□□□□□ -0.52
CLK4-206ENST00000520878 UBP1Q9NZI7 540 aa11.78□□□□□ -0.52
CLK4-206ENST00000520878 USP15Q9Y4E8 981 aaPredicted RBP11.78□□□□□ -0.52
CLK4-206ENST00000520878 TRPV2Q9Y5S1 764 aa11.78□□□□□ -0.52
CLK4-206ENST00000520878 ZNF646O15015 1829 aaPredicted RBP11.78□□□□□ -0.52
CLK4-206ENST00000520878 KIF13BQ9NQT8 1826 aa11.78□□□□□ -0.52
CLK4-206ENST00000520878 COPEO14579 308 aa11.77□□□□□ -0.52
CLK4-206ENST00000520878 NPR3P17342 541 aa11.77□□□□□ -0.52
CLK4-206ENST00000520878 EPHB2P29323 1055 aa11.77□□□□□ -0.52
CLK4-206ENST00000520878 ARL13BQ3SXY8 428 aa11.77□□□□□ -0.52
CLK4-206ENST00000520878 CES3Q6UWW8 571 aa11.77□□□□□ -0.52
CLK4-206ENST00000520878 ABI1Q8IZP0 508 aa11.77□□□□□ -0.52
CLK4-206ENST00000520878 PDCD7Q8N8D1 485 aaKnown RBP11.77□□□□□ -0.52
CLK4-206ENST00000520878 TFB1MQ8WVM0 346 aaKnown RBP11.77□□□□□ -0.52
CLK4-206ENST00000520878 NCAPGQ9BPX3 1015 aa11.77□□□□□ -0.52
CLK4-206ENST00000520878 GNEQ9Y223 722 aaKnown RBP11.77□□□□□ -0.52
CLK4-206ENST00000520878 CENPFP49454 3210 aa11.77□□□□□ -0.52
CLK4-206ENST00000520878 CCT8L1PA6NM43 557 aa11.77□□□□□ -0.53
CLK4-206ENST00000520878 TRIM49D1C9J1S8 452 aa11.77□□□□□ -0.53
CLK4-206ENST00000520878 GPR182O15218 404 aa11.77□□□□□ -0.53
CLK4-206ENST00000520878 ZFXP17010 805 aaPredicted RBP11.77□□□□□ -0.53
CLK4-206ENST00000520878 OR1G1P47890 313 aa11.77□□□□□ -0.53
CLK4-206ENST00000520878 PURAQ00577 322 aaKnown RBP11.77□□□□□ -0.53
CLK4-206ENST00000520878 NR1H3Q13133 447 aa11.77□□□□□ -0.53
CLK4-206ENST00000520878 NOMO1Q15155 1222 aa11.77□□□□□ -0.53
CLK4-206ENST00000520878 PDZD4Q76G19 769 aaPredicted RBP11.77□□□□□ -0.53
CLK4-206ENST00000520878 TRIM56Q9BRZ2 755 aaKnown RBP11.77□□□□□ -0.53
CLK4-206ENST00000520878 SLCO1B3Q9NPD5 702 aa11.77□□□□□ -0.53
CLK4-206ENST00000520878 HAUS2Q9NVX0 235 aa11.77□□□□□ -0.53
CLK4-206ENST00000520878 GABRQQ9UN88 632 aa11.77□□□□□ -0.53
CLK4-206ENST00000520878 MFHAS1Q9Y4C4 1052 aa11.77□□□□□ -0.53
CLK4-206ENST00000520878 TCRBV5S1A1TA0A578 114 aa11.77□□□□□ -0.53
CLK4-206ENST00000520878 KRT37O76014 449 aa11.77□□□□□ -0.53
CLK4-206ENST00000520878 BEST1O76090 585 aa11.77□□□□□ -0.53
CLK4-206ENST00000520878 ASGR1P07306 291 aa11.77□□□□□ -0.53
CLK4-206ENST00000520878 TKTP29401 623 aaKnown RBP11.77□□□□□ -0.53
CLK4-206ENST00000520878 ITKQ08881 620 aa11.77□□□□□ -0.53
CLK4-206ENST00000520878 SREBF2Q12772 1141 aa11.77□□□□□ -0.53
CLK4-206ENST00000520878 MPP2Q14168 576 aa11.77□□□□□ -0.53
CLK4-206ENST00000520878 GDF6Q6KF10 455 aaPredicted RBP11.77□□□□□ -0.53
CLK4-206ENST00000520878 KLHL29Q96CT2 875 aa11.77□□□□□ -0.53
CLK4-206ENST00000520878 CELF6Q96J87 481 aaKnown RBP11.77□□□□□ -0.53
CLK4-206ENST00000520878 ZIC5Q96T25 663 aa11.77□□□□□ -0.53
CLK4-206ENST00000520878 VRTNQ9H8Y1 702 aa11.77□□□□□ -0.53
CLK4-206ENST00000520878 FAM155BO75949 473 aa11.76□□□□□ -0.53
CLK4-206ENST00000520878 PFKMP08237 780 aa11.76□□□□□ -0.53
CLK4-206ENST00000520878 KITP10721 976 aa11.76□□□□□ -0.53
CLK4-206ENST00000520878 CA8P35219 290 aa11.76□□□□□ -0.53
CLK4-206ENST00000520878 FAAP100Q0VG06 881 aa11.76□□□□□ -0.53
CLK4-206ENST00000520878 SYPL2Q5VXT5 272 aa11.76□□□□□ -0.53
CLK4-206ENST00000520878 TRPM8Q7Z2W7 1104 aa11.76□□□□□ -0.53
CLK4-206ENST00000520878 TMEM110Q86TL2 294 aa11.76□□□□□ -0.53
CLK4-206ENST00000520878 RASAL3Q86YV0 1011 aa11.76□□□□□ -0.53
CLK4-206ENST00000520878 KIF2BQ8N4N8 673 aa11.76□□□□□ -0.53
CLK4-206ENST00000520878 LINC01465Q8N7H1 131 aa11.76□□□□□ -0.53
CLK4-206ENST00000520878 FAM111AQ96PZ2 611 aa11.76□□□□□ -0.53
CLK4-206ENST00000520878 PAAF1Q9BRP4 392 aa11.76□□□□□ -0.53
CLK4-206ENST00000520878 SLC4A5Q9BY07 1137 aa11.76□□□□□ -0.53
CLK4-206ENST00000520878 ETNK2Q9NVF9 386 aa11.76□□□□□ -0.53
CLK4-206ENST00000520878 ABI2Q9NYB9 513 aaPredicted RBP11.76□□□□□ -0.53
CLK4-206ENST00000520878 PADI3Q9ULW8 664 aa11.76□□□□□ -0.53
CLK4-206ENST00000520878 DERAQ9Y315 318 aa11.76□□□□□ -0.53
CLK4-206ENST00000520878 DFFAO00273 331 aa11.76□□□□□ -0.53
CLK4-206ENST00000520878 PCSK1P29120 753 aa11.76□□□□□ -0.53
CLK4-206ENST00000520878 TSPY1Q01534 308 aa11.76□□□□□ -0.53
CLK4-206ENST00000520878 MFSD5Q6N075 450 aa11.76□□□□□ -0.53
CLK4-206ENST00000520878 VSTM1Q6UX27 236 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms