RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 RBM23Q86U06 439 aaKnown RBP9.34□□□□□ -0.91
CSMD1-208ENST00000520561 TAC4Q86UU9 113 aa9.34□□□□□ -0.91
CSMD1-208ENST00000520561 CPNE8Q86YQ8 564 aa9.34□□□□□ -0.91
CSMD1-208ENST00000520561 LEMD2Q8NC56 503 aa9.34□□□□□ -0.91
CSMD1-208ENST00000520561 DQX1Q8TE96 717 aaKnown RBP9.34□□□□□ -0.91
CSMD1-208ENST00000520561 SLC22A17Q8WUG5 538 aa9.34□□□□□ -0.91
CSMD1-208ENST00000520561 CENPIQ92674 756 aaPredicted RBP9.34□□□□□ -0.91
CSMD1-208ENST00000520561 CASP10Q92851 521 aa9.34□□□□□ -0.91
CSMD1-208ENST00000520561 CD101Q93033 1021 aa9.34□□□□□ -0.91
CSMD1-208ENST00000520561 PBKQ96KB5 322 aa9.34□□□□□ -0.91
CSMD1-208ENST00000520561 MYRFLQ96LU7 910 aa9.34□□□□□ -0.91
CSMD1-208ENST00000520561 PSMB7Q99436 277 aa9.34□□□□□ -0.91
CSMD1-208ENST00000520561 NPY6RQ99463 290 aa9.34□□□□□ -0.91
CSMD1-208ENST00000520561 TUBB2BQ9BVA1 445 aa9.34□□□□□ -0.91
CSMD1-208ENST00000520561 NACA2Q9H009 215 aa9.34□□□□□ -0.91
CSMD1-208ENST00000520561 SMOC2Q9H3U7 446 aa9.34□□□□□ -0.91
CSMD1-208ENST00000520561 ZWILCHQ9H900 591 aa9.34□□□□□ -0.91
CSMD1-208ENST00000520561 NMUR1Q9HB89 426 aa9.34□□□□□ -0.91
CSMD1-208ENST00000520561 ASAH2Q9NR71 780 aa9.34□□□□□ -0.91
CSMD1-208ENST00000520561 DZANK1Q9NVP4 752 aa9.34□□□□□ -0.91
CSMD1-208ENST00000520561 DDIT4Q9NX09 232 aa9.34□□□□□ -0.91
CSMD1-208ENST00000520561 ZDHHC7Q9NXF8 308 aa9.34□□□□□ -0.91
CSMD1-208ENST00000520561 DDX56Q9NY93 547 aaKnown RBP9.34□□□□□ -0.91
CSMD1-208ENST00000520561 COX16Q9P0S2 106 aa9.34□□□□□ -0.91
CSMD1-208ENST00000520561 USP18Q9UMW8 372 aa9.34□□□□□ -0.91
CSMD1-208ENST00000520561 PCDHA3Q9Y5H8 950 aa9.34□□□□□ -0.91
CSMD1-208ENST00000520561 ATG2AQ2TAZ0 1938 aa9.34□□□□□ -0.91
CSMD1-208ENST00000520561 GREB1Q4ZG55 1949 aa9.33□□□□□ -0.92
CSMD1-208ENST00000520561 RFXAPO00287 272 aa9.33□□□□□ -0.92
CSMD1-208ENST00000520561 CES2O00748 559 aa9.33□□□□□ -0.92
CSMD1-208ENST00000520561 PER2O15055 1255 aa9.33□□□□□ -0.92
CSMD1-208ENST00000520561 DDX3YO15523 660 aaKnown RBP9.33□□□□□ -0.92
CSMD1-208ENST00000520561 IRAK2O43187 625 aa9.33□□□□□ -0.92
CSMD1-208ENST00000520561 FGF19O95750 216 aa9.33□□□□□ -0.92
CSMD1-208ENST00000520561 TRUB2O95900 331 aaKnown RBP9.33□□□□□ -0.92
CSMD1-208ENST00000520561 FYNP06241 537 aa9.33□□□□□ -0.92
CSMD1-208ENST00000520561 POU2F2P09086 479 aa9.33□□□□□ -0.92
CSMD1-208ENST00000520561 ZDHHC11BP0C7U3 371 aa9.33□□□□□ -0.92
CSMD1-208ENST00000520561 TFE3P19532 575 aaPredicted RBP9.33□□□□□ -0.92
CSMD1-208ENST00000520561 CETN2P41208 172 aa9.33□□□□□ -0.92
CSMD1-208ENST00000520561 MARCKSL1P49006 195 aa9.33□□□□□ -0.92
CSMD1-208ENST00000520561 TUBP50607 506 aa9.33□□□□□ -0.92
CSMD1-208ENST00000520561 HDAC4P56524 1084 aa9.33□□□□□ -0.92
CSMD1-208ENST00000520561 TAS2R40P59535 323 aa9.33□□□□□ -0.92
CSMD1-208ENST00000520561 CKAP4Q07065 602 aaKnown RBP9.33□□□□□ -0.92
CSMD1-208ENST00000520561 EFHC2Q5JST6 749 aa9.33□□□□□ -0.92
CSMD1-208ENST00000520561 C10orf120Q5SQS8 335 aa9.33□□□□□ -0.92
CSMD1-208ENST00000520561 HECTD3Q5T447 861 aa9.33□□□□□ -0.92
CSMD1-208ENST00000520561 CCDC181Q5TID7 509 aa9.33□□□□□ -0.92
CSMD1-208ENST00000520561 OTUD1Q5VV17 481 aaPredicted RBP9.33□□□□□ -0.92
CSMD1-208ENST00000520561 KATNAL2Q8IYT4 538 aa9.33□□□□□ -0.92
CSMD1-208ENST00000520561 ADAM32Q8TC27 787 aa9.33□□□□□ -0.92
CSMD1-208ENST00000520561 MRPS31Q92665 395 aaKnown RBP9.33□□□□□ -0.92
CSMD1-208ENST00000520561 KRT35Q92764 455 aa9.33□□□□□ -0.92
CSMD1-208ENST00000520561 RNF34Q969K3 372 aa9.33□□□□□ -0.92
CSMD1-208ENST00000520561 NT5C3BQ969T7 300 aa9.33□□□□□ -0.92
CSMD1-208ENST00000520561 PGAP3Q96FM1 320 aaPredicted RBP9.33□□□□□ -0.92
CSMD1-208ENST00000520561 RBM41Q96IZ5 413 aaKnown RBP9.33□□□□□ -0.92
CSMD1-208ENST00000520561 OSBPL9Q96SU4 736 aa9.33□□□□□ -0.92
CSMD1-208ENST00000520561 CARD9Q9H257 536 aa9.33□□□□□ -0.92
CSMD1-208ENST00000520561 SFXN1Q9H9B4 322 aa9.33□□□□□ -0.92
CSMD1-208ENST00000520561 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.33□□□□□ -0.92
CSMD1-208ENST00000520561 PCSK1NQ9UHG2 260 aa9.33□□□□□ -0.92
CSMD1-208ENST00000520561 RASAL2Q9UJF2 1139 aa9.33□□□□□ -0.92
CSMD1-208ENST00000520561 LRRD1A4D1F6 860 aa9.32□□□□□ -0.92
CSMD1-208ENST00000520561 ZNF840PA6NDX5 716 aa9.32□□□□□ -0.92
CSMD1-208ENST00000520561 MDM4O15151 490 aa9.32□□□□□ -0.92
CSMD1-208ENST00000520561 CEP104O60308 925 aa9.32□□□□□ -0.92
CSMD1-208ENST00000520561 TADA3O75528 432 aa9.32□□□□□ -0.92
CSMD1-208ENST00000520561 RFPL2O75678 378 aa9.32□□□□□ -0.92
CSMD1-208ENST00000520561 ENDOD1O94919 500 aa9.32□□□□□ -0.92
CSMD1-208ENST00000520561 IGLV3-25P01717 112 aa9.32□□□□□ -0.92
CSMD1-208ENST00000520561 APOEP02649 317 aa9.32□□□□□ -0.92
CSMD1-208ENST00000520561 TCF4P15884 667 aa9.32□□□□□ -0.92
CSMD1-208ENST00000520561 PRLRP16471 622 aa9.32□□□□□ -0.92
CSMD1-208ENST00000520561 GABRR2P28476 465 aa9.32□□□□□ -0.92
CSMD1-208ENST00000520561 CXCR5P32302 372 aa9.32□□□□□ -0.92
CSMD1-208ENST00000520561 PAFAH1B1P43034 410 aa9.32□□□□□ -0.92
CSMD1-208ENST00000520561 KPNA1P52294 538 aaPredicted RBP9.32□□□□□ -0.92
CSMD1-208ENST00000520561 AIF1P55008 147 aa9.32□□□□□ -0.92
CSMD1-208ENST00000520561 PITX1P78337 314 aaPredicted RBP9.32□□□□□ -0.92
CSMD1-208ENST00000520561 AMPD2Q01433 879 aa9.32□□□□□ -0.92
CSMD1-208ENST00000520561 EFEMP1Q12805 493 aa9.32□□□□□ -0.92
CSMD1-208ENST00000520561 NNTQ13423 1086 aa9.32□□□□□ -0.92
CSMD1-208ENST00000520561 KRT81Q14533 505 aa9.32□□□□□ -0.92
CSMD1-208ENST00000520561 CLUL1Q15846 466 aa9.32□□□□□ -0.92
CSMD1-208ENST00000520561 WHAMMP3Q1A5X7 153 aa9.32□□□□□ -0.92
CSMD1-208ENST00000520561 SMTNL2Q2TAL5 461 aa9.32□□□□□ -0.92
CSMD1-208ENST00000520561 ARL13BQ3SXY8 428 aa9.32□□□□□ -0.92
CSMD1-208ENST00000520561 SH3PXD2AQ5TCZ1 1133 aa9.32□□□□□ -0.92
CSMD1-208ENST00000520561 PRPF38BQ5VTL8 546 aaKnown RBP9.32□□□□□ -0.92
CSMD1-208ENST00000520561 SNX30Q5VWJ9 437 aa9.32□□□□□ -0.92
CSMD1-208ENST00000520561 KLHDC10Q6PID8 442 aa9.32□□□□□ -0.92
CSMD1-208ENST00000520561 PDZD4Q76G19 769 aaPredicted RBP9.32□□□□□ -0.92
CSMD1-208ENST00000520561 BNIPLQ7Z465 357 aa9.32□□□□□ -0.92
CSMD1-208ENST00000520561 FAM131BQ86XD5 332 aa9.32□□□□□ -0.92
CSMD1-208ENST00000520561 TMC8Q8IU68 726 aa9.32□□□□□ -0.92
CSMD1-208ENST00000520561 CCDC50Q8IVM0 306 aa9.32□□□□□ -0.92
CSMD1-208ENST00000520561 EXD1Q8NHP7 514 aa9.32□□□□□ -0.92
CSMD1-208ENST00000520561 TEKT4Q8WW24 435 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms