RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 SNX16P57768 344 aa23.02■■□□□ 1.28
VEGFA-217ENST00000518538 COG7P83436 770 aa23.02■■□□□ 1.28
VEGFA-217ENST00000518538 HTR3DQ70Z44 454 aa23.02■■□□□ 1.28
VEGFA-217ENST00000518538 PJA1Q8NG27 643 aa23.02■■□□□ 1.28
VEGFA-217ENST00000518538 FAM3CQ92520 227 aa23.02■■□□□ 1.28
VEGFA-217ENST00000518538 EDEM1Q92611 657 aa23.02■■□□□ 1.28
VEGFA-217ENST00000518538 WBP2Q969T9 261 aa23.02■■□□□ 1.28
VEGFA-217ENST00000518538 OTUB2Q96DC9 234 aa23.02■■□□□ 1.28
VEGFA-217ENST00000518538 NELL2Q99435 816 aa23.02■■□□□ 1.28
VEGFA-217ENST00000518538 LSM7Q9UK45 103 aaKnown RBP23.02■■□□□ 1.28
VEGFA-217ENST00000518538 SCAMP3O14828 347 aaKnown RBP23.01■■□□□ 1.27
VEGFA-217ENST00000518538 GREM1O60565 184 aa23.01■■□□□ 1.27
VEGFA-217ENST00000518538 AVPR2P30518 371 aa23.01■■□□□ 1.27
VEGFA-217ENST00000518538 CDR2Q01850 454 aa23.01■■□□□ 1.27
VEGFA-217ENST00000518538 UBXN2BQ14CS0 331 aa23.01■■□□□ 1.27
VEGFA-217ENST00000518538 MSANTD2Q6P1R3 559 aa23.01■■□□□ 1.27
VEGFA-217ENST00000518538 FMNL3Q8IVF7 1028 aa23.01■■□□□ 1.27
VEGFA-217ENST00000518538 TMEM105Q8N8V8 129 aa23.01■■□□□ 1.27
VEGFA-217ENST00000518538 IPO4Q8TEX9 1081 aaKnown RBP23.01■■□□□ 1.27
VEGFA-217ENST00000518538 SLC20A1Q8WUM9 679 aa23.01■■□□□ 1.27
VEGFA-217ENST00000518538 BAP1Q92560 729 aa23.01■■□□□ 1.27
VEGFA-217ENST00000518538 TRIM62Q9BVG3 475 aa23.01■■□□□ 1.27
VEGFA-217ENST00000518538 OSBPL6Q9BZF3 934 aa23.01■■□□□ 1.27
VEGFA-217ENST00000518538 TJP2Q9UDY2 1190 aa23.01■■□□□ 1.27
VEGFA-217ENST00000518538 SIT1Q9Y3P8 196 aa23.01■■□□□ 1.27
VEGFA-217ENST00000518538 PI15O43692 258 aa23■■□□□ 1.27
VEGFA-217ENST00000518538 STC2O76061 302 aa23■■□□□ 1.27
VEGFA-217ENST00000518538 CCDC172P0C7W6 258 aa23■■□□□ 1.27
VEGFA-217ENST00000518538 TARSP26639 723 aaKnown RBP23■■□□□ 1.27
VEGFA-217ENST00000518538 PBX1P40424 430 aa23■■□□□ 1.27
VEGFA-217ENST00000518538 NR1H3Q13133 447 aa23■■□□□ 1.27
VEGFA-217ENST00000518538 PTPN20Q4JDL3 420 aa23■■□□□ 1.27
VEGFA-217ENST00000518538 BEND5Q7L4P6 421 aa23■■□□□ 1.27
VEGFA-217ENST00000518538 BBS7Q8IWZ6 715 aa23■■□□□ 1.27
VEGFA-217ENST00000518538 ADGRG2Q8IZP9 1017 aa23■■□□□ 1.27
VEGFA-217ENST00000518538 RNF214Q8ND24 703 aa23■■□□□ 1.27
VEGFA-217ENST00000518538 FAM149B1Q96BN6 582 aa23■■□□□ 1.27
VEGFA-217ENST00000518538 IFNKQ9P0W0 207 aa23■■□□□ 1.27
VEGFA-217ENST00000518538 SLC12A8A0AV02 714 aa22.99■■□□□ 1.27
VEGFA-217ENST00000518538 FAM170BA6NMN3 283 aa22.99■■□□□ 1.27
VEGFA-217ENST00000518538 ERBB2P04626 1255 aa22.99■■□□□ 1.27
VEGFA-217ENST00000518538 FERP16591 822 aa22.99■■□□□ 1.27
VEGFA-217ENST00000518538 NOMO3P69849 1222 aa22.99■■□□□ 1.27
VEGFA-217ENST00000518538 AMPD2Q01433 879 aa22.99■■□□□ 1.27
VEGFA-217ENST00000518538 FMO1Q01740 532 aa22.99■■□□□ 1.27
VEGFA-217ENST00000518538 ARID5AQ03989 594 aa22.99■■□□□ 1.27
VEGFA-217ENST00000518538 FIGNQ5HY92 759 aa22.99■■□□□ 1.27
VEGFA-217ENST00000518538 Q6ZNB5 142 aa22.99■■□□□ 1.27
VEGFA-217ENST00000518538 CCDC105Q8IYK2 499 aa22.99■■□□□ 1.27
VEGFA-217ENST00000518538 EDEM3Q9BZQ6 932 aa22.99■■□□□ 1.27
VEGFA-217ENST00000518538 TTYH3Q9C0H2 523 aa22.99■■□□□ 1.27
VEGFA-217ENST00000518538 SYNCQ9H7C4 482 aa22.99■■□□□ 1.27
VEGFA-217ENST00000518538 HBS1LQ9Y450 684 aaKnown RBP22.99■■□□□ 1.27
VEGFA-217ENST00000518538 MTF2Q9Y483 593 aaPredicted RBP22.99■■□□□ 1.27
VEGFA-217ENST00000518538 CYP17A1P05093 508 aa22.98■■□□□ 1.27
VEGFA-217ENST00000518538 FYNP06241 537 aa22.98■■□□□ 1.27
VEGFA-217ENST00000518538 NCAM1P13591 858 aa22.98■■□□□ 1.27
VEGFA-217ENST00000518538 CHRNB2P17787 502 aa22.98■■□□□ 1.27
VEGFA-217ENST00000518538 GJA4P35212 333 aa22.98■■□□□ 1.27
VEGFA-217ENST00000518538 DHCR24Q15392 516 aa22.98■■□□□ 1.27
VEGFA-217ENST00000518538 TXNDC11Q6PKC3 985 aa22.98■■□□□ 1.27
VEGFA-217ENST00000518538 TRIM72Q6ZMU5 477 aa22.98■■□□□ 1.27
VEGFA-217ENST00000518538 ZNF687Q8N1G0 1237 aa22.98■■□□□ 1.27
VEGFA-217ENST00000518538 PLD4Q96BZ4 506 aa22.98■■□□□ 1.27
VEGFA-217ENST00000518538 CHFRQ96EP1 664 aa22.98■■□□□ 1.27
VEGFA-217ENST00000518538 NUP58Q9BVL2 599 aa22.98■■□□□ 1.27
VEGFA-217ENST00000518538 DCLK3Q9C098 648 aa22.98■■□□□ 1.27
VEGFA-217ENST00000518538 POPDC2Q9HBU9 364 aa22.98■■□□□ 1.27
VEGFA-217ENST00000518538 ASNSD1Q9NWL6 643 aa22.98■■□□□ 1.27
VEGFA-217ENST00000518538 SFMBT1Q9UHJ3 866 aa22.98■■□□□ 1.27
VEGFA-217ENST00000518538 NDRG2Q9UN36 371 aaKnown RBP22.98■■□□□ 1.27
VEGFA-217ENST00000518538 KMT2EQ8IZD2 1858 aa22.98■■□□□ 1.27
VEGFA-217ENST00000518538 LRRC53A6NM62 1247 aa22.97■■□□□ 1.27
VEGFA-217ENST00000518538 NCAM2O15394 837 aa22.97■■□□□ 1.27
VEGFA-217ENST00000518538 CYP1A1P04798 512 aaPredicted RBP22.97■■□□□ 1.27
VEGFA-217ENST00000518538 TPM3P06753 285 aa22.97■■□□□ 1.27
VEGFA-217ENST00000518538 GLI1P08151 1106 aa22.97■■□□□ 1.27
VEGFA-217ENST00000518538 HMBSP08397 361 aa22.97■■□□□ 1.27
VEGFA-217ENST00000518538 GABRB2P47870 512 aa22.97■■□□□ 1.27
VEGFA-217ENST00000518538 YWHAZP63104 245 aaKnown RBP22.97■■□□□ 1.27
VEGFA-217ENST00000518538 EFHC1Q5JVL4 640 aa22.97■■□□□ 1.27
VEGFA-217ENST00000518538 NAA35Q5VZE5 725 aa22.97■■□□□ 1.27
VEGFA-217ENST00000518538 OR6B2Q6IFH4 312 aa22.97■■□□□ 1.27
VEGFA-217ENST00000518538 OLFML1Q6UWY5 402 aa22.97■■□□□ 1.27
VEGFA-217ENST00000518538 TOGARAM2Q6ZUX3 1019 aa22.97■■□□□ 1.27
VEGFA-217ENST00000518538 FAM183BPQ6ZVS7 135 aa22.97■■□□□ 1.27
VEGFA-217ENST00000518538 ERICH1Q86X53 443 aa22.97■■□□□ 1.27
VEGFA-217ENST00000518538 ZDHHC17Q8IUH5 632 aa22.97■■□□□ 1.27
VEGFA-217ENST00000518538 MSANTD4Q8NCY6 345 aa22.97■■□□□ 1.27
VEGFA-217ENST00000518538 PIWIL1Q96J94 861 aaKnown RBP22.97■■□□□ 1.27
VEGFA-217ENST00000518538 NAALADL1Q9UQQ1 740 aa22.97■■□□□ 1.27
VEGFA-217ENST00000518538 ZNF510Q9Y2H8 683 aa22.97■■□□□ 1.27
VEGFA-217ENST00000518538 CAPN9O14815 690 aa22.96■■□□□ 1.27
VEGFA-217ENST00000518538 ADH1CP00326 375 aa22.96■■□□□ 1.27
VEGFA-217ENST00000518538 KLKB1P03952 638 aa22.96■■□□□ 1.27
VEGFA-217ENST00000518538 DCNP07585 359 aaKnown RBP22.96■■□□□ 1.27
VEGFA-217ENST00000518538 CORO1AP31146 461 aaKnown RBP22.96■■□□□ 1.27
VEGFA-217ENST00000518538 NUBP1P53384 320 aa22.96■■□□□ 1.27
VEGFA-217ENST00000518538 PON2Q15165 354 aa22.96■■□□□ 1.27
VEGFA-217ENST00000518538 TRIP4Q15650 581 aaPredicted RBP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms