RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 MALT1Q9UDY8 824 aa0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 KCNG1Q9UIX4 513 aa0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 MRPS17Q9Y2R5 130 aaKnown RBP0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 KCNK7Q9Y2U2 307 aa0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 SAA2-SAA4A0A096LPE2 208 aa0.26□□□□□ -2.37
RNU6-557P-201ENST00000516842 PRSS29PA6NIE9 313 aa0.26□□□□□ -2.37
RNU6-557P-201ENST00000516842 C16orf96A6NNT2 1141 aa0.26□□□□□ -2.37
RNU6-557P-201ENST00000516842 F2RL2O00254 374 aa0.26□□□□□ -2.37
RNU6-557P-201ENST00000516842 TCEA3O75764 348 aa0.26□□□□□ -2.37
RNU6-557P-201ENST00000516842 RAPGEF3O95398 923 aa0.26□□□□□ -2.37
RNU6-557P-201ENST00000516842 PRKCBP05771 671 aa0.26□□□□□ -2.37
RNU6-557P-201ENST00000516842 ST6GAL1P15907 406 aa0.26□□□□□ -2.37
RNU6-557P-201ENST00000516842 ZNF26P17031 533 aaPredicted RBP0.26□□□□□ -2.37
RNU6-557P-201ENST00000516842 LSP1P33241 339 aa0.26□□□□□ -2.37
RNU6-557P-201ENST00000516842 LUMP51884 338 aaPredicted RBP0.26□□□□□ -2.37
RNU6-557P-201ENST00000516842 PMS2P54278 862 aa0.26□□□□□ -2.37
RNU6-557P-201ENST00000516842 LILRA4P59901 499 aa0.26□□□□□ -2.37
RNU6-557P-201ENST00000516842 TUBA1BP68363 451 aa0.26□□□□□ -2.37
RNU6-557P-201ENST00000516842 LRMPQ12912 555 aa0.26□□□□□ -2.37
RNU6-557P-201ENST00000516842 PEX6Q13608 980 aa0.26□□□□□ -2.37
RNU6-557P-201ENST00000516842 PFKFB3Q16875 520 aaPredicted RBP0.26□□□□□ -2.37
RNU6-557P-201ENST00000516842 CPEB4Q17RY0 729 aaKnown RBP eCLIP0.26□□□□□ -2.37
RNU6-557P-201ENST00000516842 C4orf46Q504U0 113 aa0.26□□□□□ -2.37
RNU6-557P-201ENST00000516842 C6orf10Q5SRN2 563 aa0.26□□□□□ -2.37
RNU6-557P-201ENST00000516842 FNBP1LQ5T0N5 605 aa0.26□□□□□ -2.37
RNU6-557P-201ENST00000516842 DCAF12L1Q5VU92 463 aa0.26□□□□□ -2.37
RNU6-557P-201ENST00000516842 FAM180AQ6UWF9 173 aa0.26□□□□□ -2.37
RNU6-557P-201ENST00000516842 NHLRC1Q6VVB1 395 aa0.26□□□□□ -2.37
RNU6-557P-201ENST00000516842 SLC26A9Q7LBE3 791 aa0.26□□□□□ -2.37
RNU6-557P-201ENST00000516842 GPSM1Q86YR5 675 aa0.26□□□□□ -2.37
RNU6-557P-201ENST00000516842 RHOT1Q8IXI2 618 aa0.26□□□□□ -2.37
RNU6-557P-201ENST00000516842 PAQR4Q8N4S7 273 aaPredicted RBP0.26□□□□□ -2.37
RNU6-557P-201ENST00000516842 KBTBD3Q8NAB2 608 aa0.26□□□□□ -2.37
RNU6-557P-201ENST00000516842 ADAD2Q8NCV1 583 aaKnown RBP0.26□□□□□ -2.37
RNU6-557P-201ENST00000516842 USP13Q92995 863 aaPredicted RBP0.26□□□□□ -2.37
RNU6-557P-201ENST00000516842 SCAMP4Q969E2 229 aa0.26□□□□□ -2.37
RNU6-557P-201ENST00000516842 FATE1Q969F0 183 aa0.26□□□□□ -2.37
RNU6-557P-201ENST00000516842 ZNF669Q96BR6 464 aaPredicted RBP0.26□□□□□ -2.37
RNU6-557P-201ENST00000516842 MFSD3Q96ES6 412 aa0.26□□□□□ -2.37
RNU6-557P-201ENST00000516842 CHRDL1Q9BU40 450 aa0.26□□□□□ -2.37
RNU6-557P-201ENST00000516842 ADI1Q9BV57 179 aa0.26□□□□□ -2.37
RNU6-557P-201ENST00000516842 CNPPD1Q9BV87 410 aa0.26□□□□□ -2.37
RNU6-557P-201ENST00000516842 IFT122Q9HBG6 1241 aa0.26□□□□□ -2.37
RNU6-557P-201ENST00000516842 DLGAP2Q9P1A6 1054 aa0.26□□□□□ -2.37
RNU6-557P-201ENST00000516842 FZD10Q9ULW2 581 aa0.26□□□□□ -2.37
RNU6-557P-201ENST00000516842 TCF19Q9Y242 345 aa0.26□□□□□ -2.37
RNU6-557P-201ENST00000516842 TENM1Q9UKZ4 2725 aa0.26□□□□□ -2.37
RNU6-557P-201ENST00000516842 MUC5ACP98088 5654 aa0.25□□□□□ -2.37
RNU6-557P-201ENST00000516842 FBN1P35555 2871 aaKnown RBP0.25□□□□□ -2.37
RNU6-557P-201ENST00000516842 KDM2BQ8NHM5 1336 aa0.25□□□□□ -2.37
RNU6-557P-201ENST00000516842 IGLV3-10A0A075B6K4 115 aa0.25□□□□□ -2.37
RNU6-557P-201ENST00000516842 I6L893 689 aaPredicted RBP0.25□□□□□ -2.37
RNU6-557P-201ENST00000516842 FYB1O15117 783 aa0.25□□□□□ -2.37
RNU6-557P-201ENST00000516842 CCP110O43303 1012 aa0.25□□□□□ -2.37
RNU6-557P-201ENST00000516842 AKAP10O43572 662 aa0.25□□□□□ -2.37
RNU6-557P-201ENST00000516842 PRKNO60260 465 aaPredicted RBP0.25□□□□□ -2.37
RNU6-557P-201ENST00000516842 F2P00734 622 aa0.25□□□□□ -2.37
RNU6-557P-201ENST00000516842 CSF1RP07333 972 aa0.25□□□□□ -2.37
RNU6-557P-201ENST00000516842 GJB1P08034 283 aa0.25□□□□□ -2.37
RNU6-557P-201ENST00000516842 PHKG2P15735 406 aa0.25□□□□□ -2.37
RNU6-557P-201ENST00000516842 RXRAP19793 462 aa0.25□□□□□ -2.37
RNU6-557P-201ENST00000516842 CLCN3P51790 818 aa0.25□□□□□ -2.37
RNU6-557P-201ENST00000516842 KRTAP12-4P60329 112 aa0.25□□□□□ -2.37
RNU6-557P-201ENST00000516842 IRX1P78414 480 aaPredicted RBP0.25□□□□□ -2.37
RNU6-557P-201ENST00000516842 HDLBPQ00341 1268 aaKnown RBP0.25□□□□□ -2.37
RNU6-557P-201ENST00000516842 BNC1Q01954 994 aa0.25□□□□□ -2.37
RNU6-557P-201ENST00000516842 DSG1Q02413 1049 aa0.25□□□□□ -2.37
RNU6-557P-201ENST00000516842 MGAT2Q10469 447 aa0.25□□□□□ -2.37
RNU6-557P-201ENST00000516842 MTA1Q13330 715 aa0.25□□□□□ -2.37
RNU6-557P-201ENST00000516842 ENPP2Q13822 863 aa0.25□□□□□ -2.37
RNU6-557P-201ENST00000516842 GPR18Q14330 331 aa0.25□□□□□ -2.37
RNU6-557P-201ENST00000516842 CFAP100Q494V2 611 aa0.25□□□□□ -2.37
RNU6-557P-201ENST00000516842 BROXQ5VW32 411 aa0.25□□□□□ -2.37
RNU6-557P-201ENST00000516842 SFRP4Q6FHJ7 346 aaPredicted RBP0.25□□□□□ -2.37
RNU6-557P-201ENST00000516842 HMBOX1Q6NT76 420 aa0.25□□□□□ -2.37
RNU6-557P-201ENST00000516842 PPP1R32Q7Z5V6 425 aa0.25□□□□□ -2.37
RNU6-557P-201ENST00000516842 EXOC3L1Q86VI1 746 aa0.25□□□□□ -2.37
RNU6-557P-201ENST00000516842 IFI44Q8TCB0 444 aa0.25□□□□□ -2.37
RNU6-557P-201ENST00000516842 TGFBRAP1Q8WUH2 860 aa0.25□□□□□ -2.37
RNU6-557P-201ENST00000516842 PIGKQ92643 395 aa0.25□□□□□ -2.37
RNU6-557P-201ENST00000516842 GPR101Q96P66 508 aaPredicted RBP0.25□□□□□ -2.37
RNU6-557P-201ENST00000516842 BUD13Q9BRD0 619 aaKnown RBP eCLIP0.25□□□□□ -2.37
RNU6-557P-201ENST00000516842 MRPL4Q9BYD3 311 aaKnown RBP0.25□□□□□ -2.37
RNU6-557P-201ENST00000516842 ACE2Q9BYF1 805 aaPredicted RBP0.25□□□□□ -2.37
RNU6-557P-201ENST00000516842 TRIM15Q9C019 465 aa0.25□□□□□ -2.37
RNU6-557P-201ENST00000516842 QRSL1Q9H0R6 528 aaKnown RBP0.25□□□□□ -2.37
RNU6-557P-201ENST00000516842 PIF1Q9H611 641 aa0.25□□□□□ -2.37
RNU6-557P-201ENST00000516842 GAREM1Q9H706 876 aa0.25□□□□□ -2.37
RNU6-557P-201ENST00000516842 KANSL2Q9H9L4 492 aa0.25□□□□□ -2.37
RNU6-557P-201ENST00000516842 WFDC1Q9HC57 220 aa0.25□□□□□ -2.37
RNU6-557P-201ENST00000516842 UTS2RQ9UKP6 389 aa0.25□□□□□ -2.37
RNU6-557P-201ENST00000516842 NDRG4Q9ULP0 352 aaKnown RBP0.25□□□□□ -2.37
RNU6-557P-201ENST00000516842 DNM3Q9UQ16 869 aa0.25□□□□□ -2.37
RNU6-557P-201ENST00000516842 KIR2DS5A0A0G2JLQ3 304 aa0.24□□□□□ -2.37
RNU6-557P-201ENST00000516842 KIR2DS3K7RE56 304 aa0.24□□□□□ -2.37
RNU6-557P-201ENST00000516842 CLGNO14967 610 aa0.24□□□□□ -2.37
RNU6-557P-201ENST00000516842 PDPK1O15530 556 aa0.24□□□□□ -2.37
RNU6-557P-201ENST00000516842 GAS7O60861 476 aa0.24□□□□□ -2.37
RNU6-557P-201ENST00000516842 RAB11FIP3O75154 756 aa0.24□□□□□ -2.37
RNU6-557P-201ENST00000516842 PMPCBO75439 489 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms