RNA–Protein interactions for RNA: ENST00000515918.1

RNU6-488P-201, Transcript of RNA, U6 small nuclear 488, pseudogene, humanhuman

BASIC

Gene RNU6-488P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-488P-201ENST00000515918 VPS28Q9UK41 221 aa4.74□□□□□ -1.65
RNU6-488P-201ENST00000515918 CAMK2AQ9UQM7 478 aa4.74□□□□□ -1.65
RNU6-488P-201ENST00000515918 PCDHA10Q9Y5I2 948 aa4.74□□□□□ -1.65
RNU6-488P-201ENST00000515918 PSAT1Q9Y617 370 aa4.74□□□□□ -1.65
RNU6-488P-201ENST00000515918 RUSC2Q8N2Y8 1516 aa4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 PEX12O00623 359 aa4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 TOR1BO14657 336 aa4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 P4HA2O15460 535 aa4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 DHX16O60231 1041 aaKnown RBP4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 MFAP3LO75121 409 aa4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 WDR47O94967 919 aa4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 VNN1O95497 513 aa4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 KRT1P04264 644 aa4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 ELANEP08246 267 aa4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 ACP5P13686 325 aa4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 CHN1P15882 459 aa4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 JUNBP17275 347 aaPredicted RBP4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 EPHA8P29322 1005 aaPredicted RBP4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 CD6P30203 668 aa4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 PDE6CP51160 858 aa4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 IRAK1P51617 712 aa4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 ARF3P61204 181 aaPredicted RBP4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 RPP30P78346 268 aaKnown RBP4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 ARF1P84077 181 aaKnown RBP4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 PTP4A2Q12974 167 aa4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 TDGQ13569 410 aa4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 CUL4AQ13619 759 aa4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 CLCA4Q14CN2 919 aa4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 SEC23BQ15437 767 aa4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 NFIL3Q16649 462 aa4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 AAK1Q2M2I8 961 aa4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 TBRG1Q3YBR2 411 aa4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 CD300EQ496F6 205 aaPredicted RBP4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 ZNF569Q5MCW4 686 aa4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 DEPDC1Q5TB30 811 aa4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 SLC9A4Q6AI14 798 aa4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 GRHL2Q6ISB3 625 aa4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 CCDC144NLQ6NUI1 221 aa4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 LRRC55Q6ZSA7 311 aa4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 PXKQ7Z7A4 578 aa4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 TAX1BP1Q86VP1 789 aa4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 ADGRG5Q8IZF4 528 aa4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 NKAIN3Q8N8D7 197 aa4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 FSIP1Q8NA03 581 aa4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 REXO5Q96IC2 774 aaKnown RBP4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 TIGD1Q96MW7 591 aa4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 ASB2Q96Q27 587 aa4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 LRRC37BQ96QE4 947 aa4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 LMF1Q96S06 567 aa4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 VN1R3Q9BXE9 311 aa4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 TEX101Q9BY14 249 aa4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 REXO4Q9GZR2 422 aaKnown RBP4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 ZCWPW1Q9H0M4 648 aa4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 TAOK3Q9H2K8 898 aa4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 STN1Q9H668 368 aaKnown RBP4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 SEC61A2Q9H9S3 476 aa4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 TMLHEQ9NVH6 421 aa4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 CNOT7Q9UIV1 285 aaKnown RBP4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 NOL7Q9UMY1 257 aaKnown RBP4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 SMG5Q9UPR3 1016 aaKnown RBP4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 USP15Q9Y4E8 981 aaPredicted RBP4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 FER1L4A9Z1Z3 1794 aa4.73□□□□□ -1.65
RNU6-488P-201ENST00000515918 PRAMEF33A0A0G2JMD5 474 aa4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 A0A1W2PS29 197 aa4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 AGAP5A6NIR3 686 aa4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 F5H697 171 aa4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 TNPO2O14787 897 aaKnown RBP4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 SEPT4O43236 478 aa4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 PRAMEF10O60809 474 aa4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 GJB3O75712 270 aa4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 IPO13O94829 963 aaKnown RBP4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 SCGB1D1O95968 90 aa4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 DNTTP04053 509 aa4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 CLEC3BP05452 202 aa4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 SLC3A2P08195 630 aaKnown RBP4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 MED14OSP0DP75 135 aa4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 ACADMP11310 421 aa4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 UBL4AP11441 157 aa4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 ALADP13716 330 aa4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 GLULP15104 373 aa4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 PORP16435 677 aaPredicted RBP4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 DRD1P21728 446 aa4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 APOBEC3AP31941 199 aaPredicted RBP4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 THBS4P35443 961 aa4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 RPS19P39019 145 aaKnown RBP4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 MLH1P40692 756 aa4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 PAFAH1B1P43034 410 aa4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 GSTM5P46439 218 aa4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 RABGGTBP53611 331 aa4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 RPL15P61313 204 aaKnown RBP4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 FOXL1Q12952 345 aa4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 CAMK1Q14012 370 aa4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 VMACQ2NL98 169 aa4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 AASDHQ4L235 1098 aaPredicted RBP4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 DCAF17Q5H9S7 520 aaPredicted RBP4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 CFAP58Q5T655 872 aa4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 NAA35Q5VZE5 725 aa4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 SFRP4Q6FHJ7 346 aaPredicted RBP4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 INO80CQ6PI98 192 aaPredicted RBP4.72□□□□□ -1.65
RNU6-488P-201ENST00000515918 TMCO3Q6UWJ1 677 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms