RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 ATMINO43313 823 aaPredicted RBP12.52□□□□□ -0.41
PDLIM5-220ENST00000514830 KRT86O43790 486 aa12.52□□□□□ -0.41
PDLIM5-220ENST00000514830 IGLV3-25P01717 112 aa12.52□□□□□ -0.41
PDLIM5-220ENST00000514830 RARGP13631 454 aa12.52□□□□□ -0.41
PDLIM5-220ENST00000514830 MAN1A1P33908 653 aa12.52□□□□□ -0.41
PDLIM5-220ENST00000514830 RFC1P35251 1148 aaPredicted RBP12.52□□□□□ -0.41
PDLIM5-220ENST00000514830 FLT3P36888 993 aa12.52□□□□□ -0.41
PDLIM5-220ENST00000514830 CCR2P41597 374 aa12.52□□□□□ -0.41
PDLIM5-220ENST00000514830 ZNF143P52747 638 aaPredicted RBP12.52□□□□□ -0.41
PDLIM5-220ENST00000514830 RPL7AP62424 266 aaKnown RBP12.52□□□□□ -0.41
PDLIM5-220ENST00000514830 IFRD2Q12894 506 aaPredicted RBP12.52□□□□□ -0.41
PDLIM5-220ENST00000514830 SLC25A52Q3SY17 297 aa12.52□□□□□ -0.41
PDLIM5-220ENST00000514830 ATAT1Q5SQI0 421 aa12.52□□□□□ -0.41
PDLIM5-220ENST00000514830 HECTD3Q5T447 861 aa12.52□□□□□ -0.41
PDLIM5-220ENST00000514830 TRNP1Q6NT89 227 aa12.52□□□□□ -0.41
PDLIM5-220ENST00000514830 DCUN1D2Q6PH85 259 aa12.52□□□□□ -0.41
PDLIM5-220ENST00000514830 HFE2Q6ZVN8 426 aa12.52□□□□□ -0.41
PDLIM5-220ENST00000514830 DEFB106AQ8N104 65 aa12.52□□□□□ -0.41
PDLIM5-220ENST00000514830 KIAA1958Q8N8K9 716 aa12.52□□□□□ -0.41
PDLIM5-220ENST00000514830 JOSD2Q8TAC2 188 aa12.52□□□□□ -0.41
PDLIM5-220ENST00000514830 ZNF564Q8TBZ8 553 aaPredicted RBP12.52□□□□□ -0.41
PDLIM5-220ENST00000514830 NDRG1Q92597 394 aaKnown RBP12.52□□□□□ -0.41
PDLIM5-220ENST00000514830 FAM149B1Q96BN6 582 aa12.52□□□□□ -0.41
PDLIM5-220ENST00000514830 NPY6RQ99463 290 aa12.52□□□□□ -0.41
PDLIM5-220ENST00000514830 NCAPGQ9BPX3 1015 aa12.52□□□□□ -0.41
PDLIM5-220ENST00000514830 CNPY3Q9BT09 278 aa12.52□□□□□ -0.41
PDLIM5-220ENST00000514830 SMOC2Q9H3U7 446 aa12.52□□□□□ -0.41
PDLIM5-220ENST00000514830 UBE2ZQ9H832 354 aaPredicted RBP12.52□□□□□ -0.41
PDLIM5-220ENST00000514830 CTTNBP2NLQ9P2B4 639 aa12.52□□□□□ -0.41
PDLIM5-220ENST00000514830 MYO1AQ9UBC5 1043 aa12.52□□□□□ -0.41
PDLIM5-220ENST00000514830 CD207Q9UJ71 328 aa12.52□□□□□ -0.41
PDLIM5-220ENST00000514830 STAP1Q9ULZ2 295 aa12.52□□□□□ -0.41
PDLIM5-220ENST00000514830 KIF26AQ9ULI4 1882 aaPredicted RBP12.52□□□□□ -0.41
PDLIM5-220ENST00000514830 GOLGA6L9A6NEM1 432 aa12.51□□□□□ -0.41
PDLIM5-220ENST00000514830 TLR5O60602 858 aa12.51□□□□□ -0.41
PDLIM5-220ENST00000514830 F9P00740 461 aa12.51□□□□□ -0.41
PDLIM5-220ENST00000514830 MYL4P12829 197 aa12.51□□□□□ -0.41
PDLIM5-220ENST00000514830 NCAM1P13591 858 aa12.51□□□□□ -0.41
PDLIM5-220ENST00000514830 TCF3P15923 654 aa12.51□□□□□ -0.41
PDLIM5-220ENST00000514830 PDGFRAP16234 1089 aa12.51□□□□□ -0.41
PDLIM5-220ENST00000514830 GPD1P21695 349 aa12.51□□□□□ -0.41
PDLIM5-220ENST00000514830 SDC4P31431 198 aa12.51□□□□□ -0.41
PDLIM5-220ENST00000514830 KPNA1P52294 538 aaPredicted RBP12.51□□□□□ -0.41
PDLIM5-220ENST00000514830 SLC7A9P82251 487 aa12.51□□□□□ -0.41
PDLIM5-220ENST00000514830 PIGHQ14442 188 aaPredicted RBP12.51□□□□□ -0.41
PDLIM5-220ENST00000514830 IFI16Q16666 785 aaKnown RBP12.51□□□□□ -0.41
PDLIM5-220ENST00000514830 SLC5A9Q2M3M2 681 aa12.51□□□□□ -0.41
PDLIM5-220ENST00000514830 ARHGAP15Q53QZ3 475 aa12.51□□□□□ -0.41
PDLIM5-220ENST00000514830 SYPL2Q5VXT5 272 aa12.51□□□□□ -0.41
PDLIM5-220ENST00000514830 STRADAQ7RTN6 431 aa12.51□□□□□ -0.41
PDLIM5-220ENST00000514830 REXO1L1PQ8IX06 675 aa12.51□□□□□ -0.41
PDLIM5-220ENST00000514830 KIAA1524Q8TCG1 905 aa12.51□□□□□ -0.41
PDLIM5-220ENST00000514830 RXFP2Q8WXD0 754 aa12.51□□□□□ -0.41
PDLIM5-220ENST00000514830 TRIM44Q96DX7 344 aaPredicted RBP12.51□□□□□ -0.41
PDLIM5-220ENST00000514830 MCEEQ96PE7 176 aa12.51□□□□□ -0.41
PDLIM5-220ENST00000514830 ATXN3LQ9H3M9 355 aa12.51□□□□□ -0.41
PDLIM5-220ENST00000514830 TASP1Q9H6P5 420 aa12.51□□□□□ -0.41
PDLIM5-220ENST00000514830 GDE1Q9NZC3 331 aa12.51□□□□□ -0.41
PDLIM5-220ENST00000514830 IP6K2Q9UHH9 426 aa12.51□□□□□ -0.41
PDLIM5-220ENST00000514830 PYCARDQ9ULZ3 195 aa12.51□□□□□ -0.41
PDLIM5-220ENST00000514830 NAALADL1Q9UQQ1 740 aa12.51□□□□□ -0.41
PDLIM5-220ENST00000514830 ZFP37Q9Y6Q3 630 aaPredicted RBP12.51□□□□□ -0.41
PDLIM5-220ENST00000514830 TCF20Q9UGU0 1960 aaKnown RBP12.5□□□□□ -0.41
PDLIM5-220ENST00000514830 A0A1W2PRU2 124 aa12.5□□□□□ -0.41
PDLIM5-220ENST00000514830 MYO1FO00160 1098 aa12.5□□□□□ -0.41
PDLIM5-220ENST00000514830 CAPN9O14815 690 aa12.5□□□□□ -0.41
PDLIM5-220ENST00000514830 GRAP2O75791 330 aa12.5□□□□□ -0.41
PDLIM5-220ENST00000514830 BMP1P13497 986 aa12.5□□□□□ -0.41
PDLIM5-220ENST00000514830 DESP17661 470 aa12.5□□□□□ -0.41
PDLIM5-220ENST00000514830 FSHRP23945 695 aa12.5□□□□□ -0.41
PDLIM5-220ENST00000514830 ATP5C1P36542 298 aaKnown RBP12.5□□□□□ -0.41
PDLIM5-220ENST00000514830 RING1Q06587 406 aa12.5□□□□□ -0.41
PDLIM5-220ENST00000514830 ZNF252P-AS1Q0IIN9 211 aa12.5□□□□□ -0.41
PDLIM5-220ENST00000514830 MTA1Q13330 715 aa12.5□□□□□ -0.41
PDLIM5-220ENST00000514830 SMAD4Q13485 552 aaKnown RBP12.5□□□□□ -0.41
PDLIM5-220ENST00000514830 LEXMQ3ZCV2 418 aa12.5□□□□□ -0.41
PDLIM5-220ENST00000514830 CCDC14Q49A88 953 aa12.5□□□□□ -0.41
PDLIM5-220ENST00000514830 DCAF6Q58WW2 860 aa12.5□□□□□ -0.41
PDLIM5-220ENST00000514830 TMEM31Q5JXX7 168 aa12.5□□□□□ -0.41
PDLIM5-220ENST00000514830 OTUD1Q5VV17 481 aaPredicted RBP12.5□□□□□ -0.41
PDLIM5-220ENST00000514830 C11orf63Q6NUN7 778 aa12.5□□□□□ -0.41
PDLIM5-220ENST00000514830 CCAR2Q8N163 923 aaKnown RBP12.5□□□□□ -0.41
PDLIM5-220ENST00000514830 DQX1Q8TE96 717 aaKnown RBP12.5□□□□□ -0.41
PDLIM5-220ENST00000514830 RNF139Q8WU17 664 aa12.5□□□□□ -0.41
PDLIM5-220ENST00000514830 HLA-CQ95604 372 aa12.5□□□□□ -0.41
PDLIM5-220ENST00000514830 TCEAL4Q96EI5 215 aa12.5□□□□□ -0.41
PDLIM5-220ENST00000514830 SERPINB11Q96P15 392 aa12.5□□□□□ -0.41
PDLIM5-220ENST00000514830 CCSER2Q9H7U1 834 aa12.5□□□□□ -0.41
PDLIM5-220ENST00000514830 TRPV4Q9HBA0 871 aa12.5□□□□□ -0.41
PDLIM5-220ENST00000514830 OSGEPQ9NPF4 335 aa12.5□□□□□ -0.41
PDLIM5-220ENST00000514830 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.5□□□□□ -0.41
PDLIM5-220ENST00000514830 SALL4Q9UJQ4 1053 aa12.5□□□□□ -0.41
PDLIM5-220ENST00000514830 DNMT3LQ9UJW3 386 aa12.5□□□□□ -0.41
PDLIM5-220ENST00000514830 ANAPC7Q9UJX3 599 aa12.5□□□□□ -0.41
PDLIM5-220ENST00000514830 ZKSCAN5Q9Y2L8 839 aa12.5□□□□□ -0.41
PDLIM5-220ENST00000514830 MRPS23Q9Y3D9 190 aaKnown RBP12.5□□□□□ -0.41
PDLIM5-220ENST00000514830 HBS1LQ9Y450 684 aaKnown RBP12.5□□□□□ -0.41
PDLIM5-220ENST00000514830 DUSP10Q9Y6W6 482 aa12.5□□□□□ -0.41
PDLIM5-220ENST00000514830 TRAV19A0A0A6YYK7 116 aa12.49□□□□□ -0.41
PDLIM5-220ENST00000514830 C2orf78A6NCI8 922 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms