RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 FRYLO94915 3013 aa10.62□□□□□ -0.71
NEDD9-214ENST00000513989 A0A1W2PQH9 124 aa10.62□□□□□ -0.71
NEDD9-214ENST00000513989 ZNF840PA6NDX5 716 aa10.62□□□□□ -0.71
NEDD9-214ENST00000513989 MYO1FO00160 1098 aa10.62□□□□□ -0.71
NEDD9-214ENST00000513989 KRT86O43790 486 aa10.62□□□□□ -0.71
NEDD9-214ENST00000513989 PDGFBP01127 241 aaPredicted RBP10.62□□□□□ -0.71
NEDD9-214ENST00000513989 NCAM1P13591 858 aa10.62□□□□□ -0.71
NEDD9-214ENST00000513989 PDGFRAP16234 1089 aa10.62□□□□□ -0.71
NEDD9-214ENST00000513989 SP100P23497 879 aaPredicted RBP10.62□□□□□ -0.71
NEDD9-214ENST00000513989 RRM1P23921 792 aa10.62□□□□□ -0.71
NEDD9-214ENST00000513989 NOS2P35228 1153 aa10.62□□□□□ -0.71
NEDD9-214ENST00000513989 KPNA1P52294 538 aaPredicted RBP10.62□□□□□ -0.71
NEDD9-214ENST00000513989 VAV2P52735 878 aa10.62□□□□□ -0.71
NEDD9-214ENST00000513989 EPHA5P54756 1037 aa10.62□□□□□ -0.71
NEDD9-214ENST00000513989 VCPP55072 806 aaKnown RBP10.62□□□□□ -0.71
NEDD9-214ENST00000513989 USP46P62068 366 aa10.62□□□□□ -0.71
NEDD9-214ENST00000513989 SIGLEC14Q08ET2 396 aa10.62□□□□□ -0.71
NEDD9-214ENST00000513989 TCF15Q12870 199 aa10.62□□□□□ -0.71
NEDD9-214ENST00000513989 PTP4A2Q12974 167 aa10.62□□□□□ -0.71
NEDD9-214ENST00000513989 MAMLD1Q13495 774 aa10.62□□□□□ -0.71
NEDD9-214ENST00000513989 MTF1Q14872 753 aa10.62□□□□□ -0.71
NEDD9-214ENST00000513989 C2CD6Q53TS8 623 aa10.62□□□□□ -0.71
NEDD9-214ENST00000513989 PLEKHA7Q6IQ23 1121 aa10.62□□□□□ -0.71
NEDD9-214ENST00000513989 OLFML1Q6UWY5 402 aa10.62□□□□□ -0.71
NEDD9-214ENST00000513989 SLC26A9Q7LBE3 791 aa10.62□□□□□ -0.71
NEDD9-214ENST00000513989 PHLDB2Q86SQ0 1253 aa10.62□□□□□ -0.71
NEDD9-214ENST00000513989 HS6ST3Q8IZP7 471 aa10.62□□□□□ -0.71
NEDD9-214ENST00000513989 ZNF276Q8N554 614 aa10.62□□□□□ -0.71
NEDD9-214ENST00000513989 PBXIP1Q96AQ6 731 aa10.62□□□□□ -0.71
NEDD9-214ENST00000513989 ZNF707Q96C28 371 aaPredicted RBP10.62□□□□□ -0.71
NEDD9-214ENST00000513989 THAP2Q9H0W7 228 aa10.62□□□□□ -0.71
NEDD9-214ENST00000513989 POMKQ9H5K3 350 aa10.62□□□□□ -0.71
NEDD9-214ENST00000513989 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.62□□□□□ -0.71
NEDD9-214ENST00000513989 GMIPQ9P107 970 aa10.62□□□□□ -0.71
NEDD9-214ENST00000513989 DNMT3LQ9UJW3 386 aa10.62□□□□□ -0.71
NEDD9-214ENST00000513989 STAP1Q9ULZ2 295 aa10.62□□□□□ -0.71
NEDD9-214ENST00000513989 PAXBP1Q9Y5B6 917 aa10.62□□□□□ -0.71
NEDD9-214ENST00000513989 ADGRG1Q9Y653 693 aa10.62□□□□□ -0.71
NEDD9-214ENST00000513989 A0A0A6YYK5 440 aaPredicted RBP10.61□□□□□ -0.71
NEDD9-214ENST00000513989 TRAV19A0A0A6YYK7 116 aa10.61□□□□□ -0.71
NEDD9-214ENST00000513989 FAM170AA1A519 330 aa10.61□□□□□ -0.71
NEDD9-214ENST00000513989 GOLGA6L9A6NEM1 432 aa10.61□□□□□ -0.71
NEDD9-214ENST00000513989 YJEFN3A6XGL0 299 aa10.61□□□□□ -0.71
NEDD9-214ENST00000513989 BTNL10A8MVZ5 291 aa10.61□□□□□ -0.71
NEDD9-214ENST00000513989 E7ENQ6 273 aa10.61□□□□□ -0.71
NEDD9-214ENST00000513989 GABBR2O75899 941 aa10.61□□□□□ -0.71
NEDD9-214ENST00000513989 F9P00740 461 aa10.61□□□□□ -0.71
NEDD9-214ENST00000513989 F11P03951 625 aa10.61□□□□□ -0.71
NEDD9-214ENST00000513989 ZDHHC11BP0C7U3 371 aa10.61□□□□□ -0.71
NEDD9-214ENST00000513989 RARGP13631 454 aa10.61□□□□□ -0.71
NEDD9-214ENST00000513989 HDCP19113 662 aa10.61□□□□□ -0.71
NEDD9-214ENST00000513989 FSHRP23945 695 aa10.61□□□□□ -0.71
NEDD9-214ENST00000513989 SDC4P31431 198 aa10.61□□□□□ -0.71
NEDD9-214ENST00000513989 ATP5C1P36542 298 aaKnown RBP10.61□□□□□ -0.71
NEDD9-214ENST00000513989 ARHGAP25P42331 645 aa10.61□□□□□ -0.71
NEDD9-214ENST00000513989 MATKP42679 507 aa10.61□□□□□ -0.71
NEDD9-214ENST00000513989 TUBP50607 506 aa10.61□□□□□ -0.71
NEDD9-214ENST00000513989 ACAP1Q15027 740 aa10.61□□□□□ -0.71
NEDD9-214ENST00000513989 ARHGAP29Q52LW3 1261 aa10.61□□□□□ -0.71
NEDD9-214ENST00000513989 DCAF6Q58WW2 860 aa10.61□□□□□ -0.71
NEDD9-214ENST00000513989 C10orf120Q5SQS8 335 aa10.61□□□□□ -0.71
NEDD9-214ENST00000513989 KLHDC10Q6PID8 442 aa10.61□□□□□ -0.71
NEDD9-214ENST00000513989 SND1Q7KZF4 910 aaKnown RBP eCLIP10.61□□□□□ -0.71
NEDD9-214ENST00000513989 RNF10Q8N5U6 811 aaKnown RBP10.61□□□□□ -0.71
NEDD9-214ENST00000513989 ACRBPQ8NEB7 543 aa10.61□□□□□ -0.71
NEDD9-214ENST00000513989 SLC35G2Q8TBE7 412 aa10.61□□□□□ -0.71
NEDD9-214ENST00000513989 UBE2Q2Q8WVN8 375 aa10.61□□□□□ -0.71
NEDD9-214ENST00000513989 NDRG1Q92597 394 aaKnown RBP10.61□□□□□ -0.71
NEDD9-214ENST00000513989 DESI2Q9BSY9 194 aa10.61□□□□□ -0.71
NEDD9-214ENST00000513989 NUP85Q9BW27 656 aa10.61□□□□□ -0.71
NEDD9-214ENST00000513989 SMOC2Q9H3U7 446 aa10.61□□□□□ -0.71
NEDD9-214ENST00000513989 SLITRK6Q9H5Y7 841 aa10.61□□□□□ -0.71
NEDD9-214ENST00000513989 TASP1Q9H6P5 420 aa10.61□□□□□ -0.71
NEDD9-214ENST00000513989 WDR6Q9NNW5 1121 aaKnown RBP10.61□□□□□ -0.71
NEDD9-214ENST00000513989 GDE1Q9NZC3 331 aa10.61□□□□□ -0.71
NEDD9-214ENST00000513989 IP6K2Q9UHH9 426 aa10.61□□□□□ -0.71
NEDD9-214ENST00000513989 NENFQ9UMX5 172 aa10.61□□□□□ -0.71
NEDD9-214ENST00000513989 ZFP37Q9Y6Q3 630 aaPredicted RBP10.61□□□□□ -0.71
NEDD9-214ENST00000513989 NOTCH4Q99466 2003 aa10.6□□□□□ -0.71
NEDD9-214ENST00000513989 A0A1W2PRU2 124 aa10.6□□□□□ -0.71
NEDD9-214ENST00000513989 C2CD4DB7Z1M9 353 aa10.6□□□□□ -0.71
NEDD9-214ENST00000513989 ZNF263O14978 683 aa10.6□□□□□ -0.71
NEDD9-214ENST00000513989 PJA2O43164 708 aa10.6□□□□□ -0.71
NEDD9-214ENST00000513989 TLR5O60602 858 aa10.6□□□□□ -0.71
NEDD9-214ENST00000513989 GRAP2O75791 330 aa10.6□□□□□ -0.71
NEDD9-214ENST00000513989 SLC2A3P11169 496 aa10.6□□□□□ -0.71
NEDD9-214ENST00000513989 GPD1P21695 349 aa10.6□□□□□ -0.71
NEDD9-214ENST00000513989 AVPR1AP37288 418 aa10.6□□□□□ -0.71
NEDD9-214ENST00000513989 ZNF143P52747 638 aaPredicted RBP10.6□□□□□ -0.71
NEDD9-214ENST00000513989 COG7P83436 770 aa10.6□□□□□ -0.71
NEDD9-214ENST00000513989 MTA1Q13330 715 aa10.6□□□□□ -0.71
NEDD9-214ENST00000513989 PIGHQ14442 188 aaPredicted RBP10.6□□□□□ -0.71
NEDD9-214ENST00000513989 TCEAL1Q15170 157 aa10.6□□□□□ -0.71
NEDD9-214ENST00000513989 SLC25A52Q3SY17 297 aa10.6□□□□□ -0.71
NEDD9-214ENST00000513989 GPR158Q5T848 1215 aa10.6□□□□□ -0.71
NEDD9-214ENST00000513989 ZNF662Q6ZS27 426 aa10.6□□□□□ -0.71
NEDD9-214ENST00000513989 GAREM2Q75VX8 874 aa10.6□□□□□ -0.71
NEDD9-214ENST00000513989 SCD5Q86SK9 330 aa10.6□□□□□ -0.71
NEDD9-214ENST00000513989 TMC8Q8IU68 726 aa10.6□□□□□ -0.71
NEDD9-214ENST00000513989 DEFB106AQ8N104 65 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms