RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 RALAP11233 206 aa10.26□□□□□ -0.77
TOPBP1-209ENST00000513818 MMP8P22894 467 aa10.26□□□□□ -0.77
TOPBP1-209ENST00000513818 DDX6P26196 483 aaKnown RBP eCLIP10.26□□□□□ -0.77
TOPBP1-209ENST00000513818 CDC25BP30305 580 aa10.26□□□□□ -0.77
TOPBP1-209ENST00000513818 HNRNPH3P31942 346 aaKnown RBP10.26□□□□□ -0.77
TOPBP1-209ENST00000513818 RNASE9P60153 205 aaKnown RBP10.26□□□□□ -0.77
TOPBP1-209ENST00000513818 USP4Q13107 963 aa10.26□□□□□ -0.77
TOPBP1-209ENST00000513818 SYPL2Q5VXT5 272 aa10.26□□□□□ -0.77
TOPBP1-209ENST00000513818 TRNP1Q6NT89 227 aa10.26□□□□□ -0.77
TOPBP1-209ENST00000513818 MON1BQ7L1V2 547 aa10.26□□□□□ -0.77
TOPBP1-209ENST00000513818 TAC4Q86UU9 113 aa10.26□□□□□ -0.77
TOPBP1-209ENST00000513818 RNF135Q8IUD6 432 aa10.26□□□□□ -0.77
TOPBP1-209ENST00000513818 FMNL3Q8IVF7 1028 aa10.26□□□□□ -0.77
TOPBP1-209ENST00000513818 GJD3Q8N144 294 aa10.26□□□□□ -0.77
TOPBP1-209ENST00000513818 EMC1Q8N766 993 aa10.26□□□□□ -0.77
TOPBP1-209ENST00000513818 JOSD2Q8TAC2 188 aa10.26□□□□□ -0.77
TOPBP1-209ENST00000513818 SH3RF2Q8TEC5 729 aa10.26□□□□□ -0.77
TOPBP1-209ENST00000513818 IRGQQ8WZA9 623 aa10.26□□□□□ -0.77
TOPBP1-209ENST00000513818 KHSRPQ92945 711 aaKnown RBP eCLIP10.26□□□□□ -0.773e-6■□□□□ 8.4
TOPBP1-209ENST00000513818 C18orf8Q96DM3 657 aa10.26□□□□□ -0.77
TOPBP1-209ENST00000513818 OCEL1Q9H607 264 aa10.26□□□□□ -0.77
TOPBP1-209ENST00000513818 KCNK12Q9HB15 430 aa10.26□□□□□ -0.77
TOPBP1-209ENST00000513818 CYLDQ9NQC7 956 aa10.26□□□□□ -0.77
TOPBP1-209ENST00000513818 ADAM22Q9P0K1 906 aa10.26□□□□□ -0.77
TOPBP1-209ENST00000513818 COX16Q9P0S2 106 aa10.26□□□□□ -0.77
TOPBP1-209ENST00000513818 ADAMTS1Q9UHI8 967 aa10.26□□□□□ -0.77
TOPBP1-209ENST00000513818 TICRRQ7Z2Z1 1910 aa10.25□□□□□ -0.77
TOPBP1-209ENST00000513818 COL4A2P08572 1712 aa10.25□□□□□ -0.77
TOPBP1-209ENST00000513818 SLC12A8A0AV02 714 aa10.25□□□□□ -0.77
TOPBP1-209ENST00000513818 LEFTY2O00292 366 aa10.25□□□□□ -0.77
TOPBP1-209ENST00000513818 DPYSL4O14531 572 aa10.25□□□□□ -0.77
TOPBP1-209ENST00000513818 NCAM1P13591 858 aa10.25□□□□□ -0.77
TOPBP1-209ENST00000513818 TFE3P19532 575 aaPredicted RBP10.25□□□□□ -0.77
TOPBP1-209ENST00000513818 ABCB4P21439 1286 aa10.25□□□□□ -0.77
TOPBP1-209ENST00000513818 RRM1P23921 792 aa10.25□□□□□ -0.77
TOPBP1-209ENST00000513818 GABRB2P47870 512 aa10.25□□□□□ -0.77
TOPBP1-209ENST00000513818 PPP3CCP48454 512 aa10.25□□□□□ -0.77
TOPBP1-209ENST00000513818 TUBP50607 506 aa10.25□□□□□ -0.77
TOPBP1-209ENST00000513818 SLC7A9P82251 487 aa10.25□□□□□ -0.77
TOPBP1-209ENST00000513818 SLC6A3Q01959 620 aa10.25□□□□□ -0.77
TOPBP1-209ENST00000513818 MTF1Q14872 753 aa10.25□□□□□ -0.77
TOPBP1-209ENST00000513818 ZNF77Q15935 545 aa10.25□□□□□ -0.77
TOPBP1-209ENST00000513818 SNX30Q5VWJ9 437 aa10.25□□□□□ -0.77
TOPBP1-209ENST00000513818 TRIM68Q6AZZ1 485 aa10.25□□□□□ -0.77
TOPBP1-209ENST00000513818 ACAD10Q6JQN1 1059 aa10.25□□□□□ -0.77
TOPBP1-209ENST00000513818 TOGARAM2Q6ZUX3 1019 aa10.25□□□□□ -0.77
TOPBP1-209ENST00000513818 MTSS1LQ765P7 747 aa10.25□□□□□ -0.77
TOPBP1-209ENST00000513818 PHF13Q86YI8 300 aaPredicted RBP10.25□□□□□ -0.77
TOPBP1-209ENST00000513818 DEFB106AQ8N104 65 aa10.25□□□□□ -0.77
TOPBP1-209ENST00000513818 ARHGAP18Q8N392 663 aa10.25□□□□□ -0.77
TOPBP1-209ENST00000513818 MSANTD4Q8NCY6 345 aa10.25□□□□□ -0.77
TOPBP1-209ENST00000513818 TTC8Q8TAM2 541 aa10.25□□□□□ -0.77
TOPBP1-209ENST00000513818 DQX1Q8TE96 717 aaKnown RBP10.25□□□□□ -0.77
TOPBP1-209ENST00000513818 RNF139Q8WU17 664 aa10.25□□□□□ -0.77
TOPBP1-209ENST00000513818 GOLGA1Q92805 767 aa10.25□□□□□ -0.77
TOPBP1-209ENST00000513818 ELSPBP1Q96BH3 223 aa10.25□□□□□ -0.77
TOPBP1-209ENST00000513818 ZNF653Q96CK0 615 aa10.25□□□□□ -0.77
TOPBP1-209ENST00000513818 ASIC4Q96FT7 647 aa10.25□□□□□ -0.77
TOPBP1-209ENST00000513818 PACSIN1Q9BY11 444 aa10.25□□□□□ -0.77
TOPBP1-209ENST00000513818 DEF6Q9H4E7 631 aa10.25□□□□□ -0.77
TOPBP1-209ENST00000513818 ZFP14Q9HCL3 533 aa10.25□□□□□ -0.77
TOPBP1-209ENST00000513818 TDP1Q9NUW8 608 aa10.25□□□□□ -0.77
TOPBP1-209ENST00000513818 ZNHIT6Q9NWK9 470 aaKnown RBP10.25□□□□□ -0.77
TOPBP1-209ENST00000513818 CLIC5Q9NZA1 410 aa10.25□□□□□ -0.77
TOPBP1-209ENST00000513818 MARCH2Q9P0N8 246 aa10.25□□□□□ -0.77
TOPBP1-209ENST00000513818 CFAP97Q9P2B7 532 aa10.25□□□□□ -0.77
TOPBP1-209ENST00000513818 MYO1AQ9UBC5 1043 aa10.25□□□□□ -0.77
TOPBP1-209ENST00000513818 ARHGAP26Q9UNA1 814 aa10.25□□□□□ -0.77
TOPBP1-209ENST00000513818 WNT6Q9Y6F9 365 aa10.25□□□□□ -0.77
TOPBP1-209ENST00000513818 ZFP37Q9Y6Q3 630 aaPredicted RBP10.25□□□□□ -0.77
TOPBP1-209ENST00000513818 SOWAHDA6NJG2 315 aa10.24□□□□□ -0.77
TOPBP1-209ENST00000513818 CAPN9O14815 690 aa10.24□□□□□ -0.77
TOPBP1-209ENST00000513818 SART1O43290 800 aaKnown RBP10.24□□□□□ -0.77
TOPBP1-209ENST00000513818 HSF2BPO75031 334 aa10.24□□□□□ -0.77
TOPBP1-209ENST00000513818 DAB1O75553 588 aa10.24□□□□□ -0.77
TOPBP1-209ENST00000513818 FTLP02792 175 aaPredicted RBP10.24□□□□□ -0.77
TOPBP1-209ENST00000513818 ARSAP15289 507 aa10.24□□□□□ -0.77
TOPBP1-209ENST00000513818 GDI1P31150 447 aa10.24□□□□□ -0.77
TOPBP1-209ENST00000513818 ATP5C1P36542 298 aaKnown RBP10.24□□□□□ -0.77
TOPBP1-209ENST00000513818 FLT3P36888 993 aa10.24□□□□□ -0.77
TOPBP1-209ENST00000513818 TSR1Q2NL82 804 aaKnown RBP10.24□□□□□ -0.77
TOPBP1-209ENST00000513818 RAB6CQ53S08 254 aa10.24□□□□□ -0.77
TOPBP1-209ENST00000513818 DCAF6Q58WW2 860 aa10.24□□□□□ -0.77
TOPBP1-209ENST00000513818 CCDC122Q5T0U0 273 aa10.24□□□□□ -0.77
TOPBP1-209ENST00000513818 OTUD1Q5VV17 481 aaPredicted RBP10.24□□□□□ -0.77
TOPBP1-209ENST00000513818 DNAJC24Q6P3W2 148 aa10.24□□□□□ -0.77
TOPBP1-209ENST00000513818 MAMSTRQ6ZN01 415 aa10.24□□□□□ -0.77
TOPBP1-209ENST00000513818 SLC26A9Q7LBE3 791 aa10.24□□□□□ -0.77
TOPBP1-209ENST00000513818 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.24□□□□□ -0.77
TOPBP1-209ENST00000513818 MCOLN2Q8IZK6 566 aa10.24□□□□□ -0.77
TOPBP1-209ENST00000513818 SCML4Q8N228 414 aa10.24□□□□□ -0.77
TOPBP1-209ENST00000513818 CELF5Q8N6W0 485 aaKnown RBP10.24□□□□□ -0.77
TOPBP1-209ENST00000513818 ARHGEF26Q96DR7 871 aa10.24□□□□□ -0.77
TOPBP1-209ENST00000513818 SLC2A13Q96QE2 648 aa10.24□□□□□ -0.77
TOPBP1-209ENST00000513818 ADAM33Q9BZ11 813 aa10.24□□□□□ -0.77
TOPBP1-209ENST00000513818 RAB6CQ9H0N0 254 aa10.24□□□□□ -0.77
TOPBP1-209ENST00000513818 FAM204AQ9H8W3 233 aa10.24□□□□□ -0.77
TOPBP1-209ENST00000513818 NHEJ1Q9H9Q4 299 aaPredicted RBP10.24□□□□□ -0.77
TOPBP1-209ENST00000513818 TRPV4Q9HBA0 871 aa10.24□□□□□ -0.77
TOPBP1-209ENST00000513818 POPDC2Q9HBU9 364 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms