RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 SYBUQ9NX95 663 aa11.59□□□□□ -0.55
TCOF1-211ENST00000513346 PTTG2Q9NZH5 202 aa11.59□□□□□ -0.55
TCOF1-211ENST00000513346 COPG2Q9UBF2 871 aa11.59□□□□□ -0.55
TCOF1-211ENST00000513346 USP20Q9Y2K6 914 aa11.59□□□□□ -0.55
TCOF1-211ENST00000513346 HBP1O60381 514 aa11.59□□□□□ -0.55
TCOF1-211ENST00000513346 H2AFYO75367 372 aaKnown RBP11.59□□□□□ -0.55
TCOF1-211ENST00000513346 GJA8P48165 433 aa11.59□□□□□ -0.55
TCOF1-211ENST00000513346 SCNN1BP51168 640 aa11.59□□□□□ -0.55
TCOF1-211ENST00000513346 FKBP1AP62942 108 aaKnown RBP11.59□□□□□ -0.55
TCOF1-211ENST00000513346 MRPS22P82650 360 aaKnown RBP11.59□□□□□ -0.55
TCOF1-211ENST00000513346 RBP5P82980 135 aa11.59□□□□□ -0.55
TCOF1-211ENST00000513346 ACAP1Q15027 740 aa11.59□□□□□ -0.55
TCOF1-211ENST00000513346 EMC10Q5UCC4 262 aa11.59□□□□□ -0.55
TCOF1-211ENST00000513346 IER5Q5VY09 327 aa11.59□□□□□ -0.55
TCOF1-211ENST00000513346 LRRC71Q8N4P6 559 aa11.59□□□□□ -0.55
TCOF1-211ENST00000513346 GPRASP2Q96D09 838 aa11.59□□□□□ -0.55
TCOF1-211ENST00000513346 CDRT15Q96T59 188 aa11.59□□□□□ -0.55
TCOF1-211ENST00000513346 PHACTR1Q9C0D0 580 aa11.59□□□□□ -0.55
TCOF1-211ENST00000513346 TCF7L2Q9NQB0 619 aa11.59□□□□□ -0.55
TCOF1-211ENST00000513346 ANKEF1Q9NU02 776 aa11.59□□□□□ -0.55
TCOF1-211ENST00000513346 CYP2C9P11712 490 aa11.59□□□□□ -0.55
TCOF1-211ENST00000513346 CPA3P15088 417 aa11.59□□□□□ -0.55
TCOF1-211ENST00000513346 TAL1P17542 331 aaPredicted RBP11.59□□□□□ -0.55
TCOF1-211ENST00000513346 TMEM62Q0P6H9 643 aa11.59□□□□□ -0.55
TCOF1-211ENST00000513346 ITGADQ13349 1161 aa11.59□□□□□ -0.55
TCOF1-211ENST00000513346 UGP2Q16851 508 aa11.59□□□□□ -0.55
TCOF1-211ENST00000513346 GNASQ5JWF2 1037 aa11.59□□□□□ -0.55
TCOF1-211ENST00000513346 ITPRIPL1Q6GPH6 555 aa11.59□□□□□ -0.55
TCOF1-211ENST00000513346 ZCCHC7Q8N3Z6 543 aaKnown RBP11.59□□□□□ -0.55
TCOF1-211ENST00000513346 AFG1LQ8WV93 481 aa11.59□□□□□ -0.55
TCOF1-211ENST00000513346 CACYBPQ9HB71 228 aaKnown RBP11.59□□□□□ -0.55
TCOF1-211ENST00000513346 C6orf203Q9P0P8 240 aaPredicted RBP11.59□□□□□ -0.55
TCOF1-211ENST00000513346 DNPEPQ9ULA0 475 aa11.59□□□□□ -0.55
TCOF1-211ENST00000513346 CHKBQ9Y259 395 aa11.59□□□□□ -0.55
TCOF1-211ENST00000513346 TMX2Q9Y320 296 aa11.59□□□□□ -0.55
TCOF1-211ENST00000513346 SAC3D1A6NKF1 404 aa11.59□□□□□ -0.55
TCOF1-211ENST00000513346 FSCN2O14926 492 aa11.59□□□□□ -0.55
TCOF1-211ENST00000513346 DDX3YO15523 660 aaKnown RBP11.59□□□□□ -0.55
TCOF1-211ENST00000513346 PRPF4O43172 522 aaKnown RBP eCLIP11.59□□□□□ -0.55
TCOF1-211ENST00000513346 MAGEC1O60732 1142 aa11.59□□□□□ -0.55
TCOF1-211ENST00000513346 INHBEP58166 350 aa11.59□□□□□ -0.55
TCOF1-211ENST00000513346 NCOA4Q13772 614 aa11.59□□□□□ -0.55
TCOF1-211ENST00000513346 LPIN1Q14693 890 aa11.59□□□□□ -0.55
TCOF1-211ENST00000513346 NBPF12Q5TAG4 269 aaPredicted RBP11.59□□□□□ -0.55
TCOF1-211ENST00000513346 FAXCQ5TGI0 409 aa11.59□□□□□ -0.55
TCOF1-211ENST00000513346 HORMAD1Q86X24 394 aa11.59□□□□□ -0.55
TCOF1-211ENST00000513346 EURLQ9NYK6 297 aa11.59□□□□□ -0.55
TCOF1-211ENST00000513346 MON2Q7Z3U7 1717 aa11.59□□□□□ -0.55
TCOF1-211ENST00000513346 SLCO1B7G3V0H7 640 aa11.58□□□□□ -0.56
TCOF1-211ENST00000513346 TPD52L2O43399 206 aaKnown RBP11.58□□□□□ -0.56
TCOF1-211ENST00000513346 DCXO43602 365 aa11.58□□□□□ -0.56
TCOF1-211ENST00000513346 VCLP18206 1134 aa11.58□□□□□ -0.56
TCOF1-211ENST00000513346 RECQLP46063 649 aaPredicted RBP11.58□□□□□ -0.56
TCOF1-211ENST00000513346 TMEM63BQ5T3F8 832 aa11.58□□□□□ -0.56
TCOF1-211ENST00000513346 FAM163AQ96GL9 167 aaPredicted RBP11.58□□□□□ -0.56
TCOF1-211ENST00000513346 CADM1Q9BY67 442 aaKnown RBP11.58□□□□□ -0.56
TCOF1-211ENST00000513346 LMCD1Q9NZU5 365 aa11.58□□□□□ -0.56
TCOF1-211ENST00000513346 FZD1Q9UP38 647 aa11.58□□□□□ -0.56
TCOF1-211ENST00000513346 TRMUO75648 421 aaKnown RBP11.58□□□□□ -0.56
TCOF1-211ENST00000513346 SREBF1P36956 1147 aa11.58□□□□□ -0.56
TCOF1-211ENST00000513346 EVX2Q03828 476 aa11.58□□□□□ -0.56
TCOF1-211ENST00000513346 KRT72Q14CN4 511 aa11.58□□□□□ -0.56
TCOF1-211ENST00000513346 EFCAB12Q6NXP0 572 aa11.58□□□□□ -0.56
TCOF1-211ENST00000513346 ELMOD1Q8N336 334 aa11.58□□□□□ -0.56
TCOF1-211ENST00000513346 TNFRSF25Q93038 417 aa11.58□□□□□ -0.56
TCOF1-211ENST00000513346 MTMR9Q96QG7 549 aa11.58□□□□□ -0.56
TCOF1-211ENST00000513346 AVENQ9NQS1 362 aaPredicted RBP11.58□□□□□ -0.56
TCOF1-211ENST00000513346 NKX1-2Q9UD57 310 aaPredicted RBP11.58□□□□□ -0.56
TCOF1-211ENST00000513346 AP4B1Q9Y6B7 739 aa11.58□□□□□ -0.56
TCOF1-211ENST00000513346 TM7SF2O76062 418 aa11.58□□□□□ -0.56
TCOF1-211ENST00000513346 MOCS2O96007 188 aaPredicted RBP11.58□□□□□ -0.56
TCOF1-211ENST00000513346 ARP10275 920 aa11.58□□□□□ -0.56
TCOF1-211ENST00000513346 CDH3P22223 829 aa11.58□□□□□ -0.56
TCOF1-211ENST00000513346 GTF2H1P32780 548 aa11.58□□□□□ -0.56
TCOF1-211ENST00000513346 TRAF2Q12933 501 aa11.58□□□□□ -0.56
TCOF1-211ENST00000513346 LAMC2Q13753 1193 aa11.58□□□□□ -0.56
TCOF1-211ENST00000513346 TMEM132DQ14C87 1099 aa11.58□□□□□ -0.56
TCOF1-211ENST00000513346 EFHC2Q5JST6 749 aa11.58□□□□□ -0.56
TCOF1-211ENST00000513346 GPAT2Q6NUI2 795 aa11.58□□□□□ -0.56
TCOF1-211ENST00000513346 SLC30A10Q6XR72 485 aa11.58□□□□□ -0.56
TCOF1-211ENST00000513346 RDM1Q8NG50 284 aa11.58□□□□□ -0.56
TCOF1-211ENST00000513346 TRPC4APQ8TEL6 797 aa11.58□□□□□ -0.56
TCOF1-211ENST00000513346 DNAJC19Q96DA6 116 aa11.58□□□□□ -0.56
TCOF1-211ENST00000513346 GMCL1Q96IK5 515 aa11.58□□□□□ -0.56
TCOF1-211ENST00000513346 VPS50Q96JG6 964 aa11.58□□□□□ -0.56
TCOF1-211ENST00000513346 PWWP2AQ96N64 755 aa11.58□□□□□ -0.56
TCOF1-211ENST00000513346 SYT15Q9BQS2 421 aa11.58□□□□□ -0.56
TCOF1-211ENST00000513346 CBWD1Q9BRT8 395 aa11.58□□□□□ -0.56
TCOF1-211ENST00000513346 C1orf50Q9BV19 199 aa11.58□□□□□ -0.56
TCOF1-211ENST00000513346 S100A14Q9HCY8 104 aa11.58□□□□□ -0.56
TCOF1-211ENST00000513346 SCN3BQ9NY72 215 aa11.58□□□□□ -0.56
TCOF1-211ENST00000513346 CXCL11O14625 94 aa11.58□□□□□ -0.56
TCOF1-211ENST00000513346 CLOCKO15516 846 aa11.58□□□□□ -0.56
TCOF1-211ENST00000513346 ZC3H11AO75152 810 aaKnown RBP eCLIP11.58□□□□□ -0.56
TCOF1-211ENST00000513346 NOL4O94818 638 aa11.58□□□□□ -0.56
TCOF1-211ENST00000513346 LINGO3P0C6S8 592 aa11.58□□□□□ -0.56
TCOF1-211ENST00000513346 NFKBIAP25963 317 aa11.58□□□□□ -0.56
TCOF1-211ENST00000513346 NME3Q13232 169 aa11.58□□□□□ -0.56
TCOF1-211ENST00000513346 MFSD4BQ5TF39 518 aa11.58□□□□□ -0.56
TCOF1-211ENST00000513346 FKBP1CQ5VVH2 108 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms