RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 TMTC1Q8IUR5 882 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 SCUBE3Q8IX30 993 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 NPAS3Q8IXF0 933 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 CCDC170Q8IYT3 715 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 MCOLN2Q8IZK6 566 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 ZNF276Q8N554 614 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 C3orf20Q8ND61 904 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 CLEC4CQ8WTT0 213 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 ING5Q8WYH8 240 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 FGF13Q92913 245 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 FAM149B1Q96BN6 582 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 TRIM11Q96F44 468 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 CDK5RAP1Q96SZ6 601 aaKnown RBP7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 BAG1Q99933 345 aaPredicted RBP7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 ISCUQ9H1K1 167 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 SLITRK6Q9H5Y7 841 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 TASP1Q9H6P5 420 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 PRDM6Q9NQX0 595 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 ABCC13Q9NSE7 274 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 OLA1Q9NTK5 396 aaKnown RBP7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 ASNSD1Q9NWL6 643 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 TAS2R14Q9NYV8 317 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 CLIC5Q9NZA1 410 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 NAGPAQ9UK23 515 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 CDH7Q9ULB5 785 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 NENFQ9UMX5 172 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 USTQ9Y2C2 406 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 ZFP37Q9Y6Q3 630 aaPredicted RBP7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 NUP205Q92621 2012 aa7.95□□□□□ -1.14
HMGXB3-204ENST00000513318 MYO18AQ92614 2054 aaKnown RBP7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 TRAV19A0A0A6YYK7 116 aa7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 A0A1W2PQH9 124 aa7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 TLR5O60602 858 aa7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 DAB1O75553 588 aa7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 IPO7O95373 1038 aaKnown RBP7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 ABL1P00519 1130 aa7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 MYBL1P10243 752 aa7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 RARGP13631 454 aa7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 GBP2P32456 591 aaPredicted RBP7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 YWHAZP63104 245 aaKnown RBP7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 SLC6A3Q01959 620 aa7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 GFPT1Q06210 699 aaPredicted RBP7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 CCDC173Q0VFZ6 552 aa7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 C2CD6Q53TS8 623 aa7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 CCDC122Q5T0U0 273 aa7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 C10orf76Q5T2E6 689 aa7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 HECTD3Q5T447 861 aa7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 STXBP5Q5T5C0 1151 aa7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 GPR158Q5T848 1215 aa7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 BSPRYQ5W0U4 402 aa7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 BTBD8Q5XKL5 378 aa7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 TXNDC8Q6A555 127 aa7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 MSANTD2Q6P1R3 559 aa7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 KLHDC10Q6PID8 442 aa7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 HFE2Q6ZVN8 426 aa7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 OTOP3Q7RTS5 596 aa7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 SCD5Q86SK9 330 aa7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 TMEM139Q8IV31 216 aa7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 MAB21L3Q8N8X9 362 aa7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 TDRD5Q8NAT2 981 aaKnown RBP7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 ITFG1Q8TB96 612 aa7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 RNF139Q8WU17 664 aa7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 ATXN2LQ8WWM7 1075 aaKnown RBP7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 ZNF653Q96CK0 615 aa7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 ACSF2Q96CM8 615 aaPredicted RBP7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 MCRS1Q96EZ8 462 aa7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 PIWIL1Q96J94 861 aaKnown RBP7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 PHF7Q9BWX1 381 aaPredicted RBP7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 KIF9Q9HAQ2 790 aa7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 NMUR1Q9HB89 426 aa7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 POPDC2Q9HBU9 364 aa7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 TRPC7Q9HCX4 862 aa7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 LUC7LQ9NQ29 371 aaKnown RBP7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 GDE1Q9NZC3 331 aa7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 CHORDC1Q9UHD1 332 aaPredicted RBP7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 NR2E1Q9Y466 385 aa7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 PCDHB3Q9Y5E6 796 aa7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 COL4A3Q01955 1670 aa7.94□□□□□ -1.14
HMGXB3-204ENST00000513318 SHROOM3Q8TF72 1996 aa7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 ATG2BQ96BY7 2078 aa7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 FAM170AA1A519 330 aa7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 ANKRD62A6NC57 917 aa7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 C2orf78A6NCI8 922 aa7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 SOWAHDA6NJG2 315 aa7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 EIF3CLB5ME19 914 aaKnown RBP7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 GOLGA8SH3BPF8 625 aa7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 NRG2O14511 850 aaPredicted RBP7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 CAPN9O14815 690 aa7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 COCHO43405 550 aa7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 NDUFA10O95299 355 aa7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 LCA5LO95447 670 aa7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 FTLP02792 175 aaPredicted RBP7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 PTMAP06454 111 aaKnown RBP7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 CKMP06732 381 aa7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 MBL2P11226 248 aaPredicted RBP7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 LAMP2P13473 410 aa7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 NCAM1P13591 858 aa7.93□□□□□ -1.14
HMGXB3-204ENST00000513318 IL9P15248 144 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms