RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 TBC1D3BA6NDS4 549 aa6.82□□□□□ -1.32
KDM3B-208ENST00000512928 K7ESF4 209 aa6.82□□□□□ -1.32
KDM3B-208ENST00000512928 RNF225M0QZC1 329 aaPredicted RBP6.82□□□□□ -1.32
KDM3B-208ENST00000512928 THAP12O43422 761 aa6.82□□□□□ -1.32
KDM3B-208ENST00000512928 RPP40O75818 363 aaKnown RBP6.82□□□□□ -1.32
KDM3B-208ENST00000512928 LETM1O95202 739 aaPredicted RBP6.82□□□□□ -1.32
KDM3B-208ENST00000512928 KAT7O95251 611 aa6.82□□□□□ -1.32
KDM3B-208ENST00000512928 PAEPP09466 180 aa6.82□□□□□ -1.32
KDM3B-208ENST00000512928 TDGF1P13385 188 aa6.82□□□□□ -1.32
KDM3B-208ENST00000512928 CORO1AP31146 461 aaKnown RBP6.82□□□□□ -1.32
KDM3B-208ENST00000512928 TIE1P35590 1138 aa6.82□□□□□ -1.32
KDM3B-208ENST00000512928 PLA2G4AP47712 749 aa6.82□□□□□ -1.32
KDM3B-208ENST00000512928 MFAP3P55082 362 aa6.82□□□□□ -1.32
KDM3B-208ENST00000512928 MARSP56192 900 aaKnown RBP6.82□□□□□ -1.32
KDM3B-208ENST00000512928 APBA1Q02410 837 aa6.82□□□□□ -1.32
KDM3B-208ENST00000512928 GCNT1Q02742 428 aa6.82□□□□□ -1.32
KDM3B-208ENST00000512928 DMC1Q14565 340 aa6.82□□□□□ -1.32
KDM3B-208ENST00000512928 NFKBIBQ15653 356 aa6.82□□□□□ -1.32
KDM3B-208ENST00000512928 C10orf76Q5T2E6 689 aa6.82□□□□□ -1.32
KDM3B-208ENST00000512928 CCDC183Q5T5S1 534 aa6.82□□□□□ -1.32
KDM3B-208ENST00000512928 GRAMD4Q6IC98 578 aa6.82□□□□□ -1.32
KDM3B-208ENST00000512928 ANO7Q6IWH7 933 aa6.82□□□□□ -1.32
KDM3B-208ENST00000512928 GJB7Q6PEY0 223 aa6.82□□□□□ -1.32
KDM3B-208ENST00000512928 GBP6Q6ZN66 633 aa6.82□□□□□ -1.32
KDM3B-208ENST00000512928 TMEM25Q86YD3 366 aa6.82□□□□□ -1.32
KDM3B-208ENST00000512928 DENND1CQ8IV53 801 aa6.82□□□□□ -1.32
KDM3B-208ENST00000512928 SFTPA1Q8IWL2 248 aa6.82□□□□□ -1.32
KDM3B-208ENST00000512928 ALLCQ8N6M5 410 aa6.82□□□□□ -1.32
KDM3B-208ENST00000512928 UBR7Q8N806 425 aa6.82□□□□□ -1.32
KDM3B-208ENST00000512928 TSTD1Q8NFU3 115 aa6.82□□□□□ -1.32
KDM3B-208ENST00000512928 CCDC26Q8TAB7 109 aa6.82□□□□□ -1.32
KDM3B-208ENST00000512928 TFAP2BQ92481 460 aa6.82□□□□□ -1.32
KDM3B-208ENST00000512928 EZH1Q92800 747 aaPredicted RBP6.82□□□□□ -1.32
KDM3B-208ENST00000512928 OTUB2Q96DC9 234 aa6.82□□□□□ -1.32
KDM3B-208ENST00000512928 ERLEC1Q96DZ1 483 aa6.82□□□□□ -1.32
KDM3B-208ENST00000512928 KREMEN1Q96MU8 473 aa6.82□□□□□ -1.32
KDM3B-208ENST00000512928 CNTNAP3BQ96NU0 1288 aa6.82□□□□□ -1.32
KDM3B-208ENST00000512928 XPO6Q96QU8 1125 aaKnown RBP6.82□□□□□ -1.32
KDM3B-208ENST00000512928 CNTNAP3Q9BZ76 1288 aa6.82□□□□□ -1.32
KDM3B-208ENST00000512928 MIS12Q9H081 205 aa6.82□□□□□ -1.32
KDM3B-208ENST00000512928 EPC1Q9H2F5 836 aa6.82□□□□□ -1.32
KDM3B-208ENST00000512928 SPHK2Q9NRA0 654 aa6.82□□□□□ -1.32
KDM3B-208ENST00000512928 DNAJC17Q9NVM6 304 aaKnown RBP6.82□□□□□ -1.32
KDM3B-208ENST00000512928 PLK2Q9NYY3 685 aa6.82□□□□□ -1.32
KDM3B-208ENST00000512928 CLIC5Q9NZA1 410 aa6.82□□□□□ -1.32
KDM3B-208ENST00000512928 MARCH2Q9P0N8 246 aa6.82□□□□□ -1.32
KDM3B-208ENST00000512928 BCCIPQ9P287 314 aaKnown RBP eCLIP6.82□□□□□ -1.32
KDM3B-208ENST00000512928 DEC1Q9P2X7 70 aa6.82□□□□□ -1.32
KDM3B-208ENST00000512928 USP18Q9UMW8 372 aa6.82□□□□□ -1.32
KDM3B-208ENST00000512928 USP3Q9Y6I4 520 aa6.82□□□□□ -1.32
KDM3B-208ENST00000512928 ANTXRLA6NF34 631 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 YJEFN3A6XGL0 299 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 KCNJ18B7U540 433 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 E7ENQ6 273 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 K7EQS6 105 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 TRIM24O15164 1050 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 AXIN1O15169 862 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 PMM2O15305 246 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 HOXC11O43248 304 aaPredicted RBP6.81□□□□□ -1.32
KDM3B-208ENST00000512928 MSI1O43347 362 aaKnown RBP6.81□□□□□ -1.32
KDM3B-208ENST00000512928 MED7O43513 233 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 HRO43593 1189 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 LILRB5O75023 590 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 TULP3O75386 442 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 STC2O76061 302 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 PAPSS2O95340 614 aaPredicted RBP6.81□□□□□ -1.32
KDM3B-208ENST00000512928 KLF8O95600 359 aaPredicted RBP6.81□□□□□ -1.32
KDM3B-208ENST00000512928 APBB3O95704 486 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 TYRP14679 529 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 SLC9A1P19634 815 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 GNA15P30679 374 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 GBP1P32455 592 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 EIF2DP41214 584 aaKnown RBP6.81□□□□□ -1.32
KDM3B-208ENST00000512928 GRIA2P42262 883 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 WASP42768 502 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 HARS2P49590 506 aaKnown RBP6.81□□□□□ -1.32
KDM3B-208ENST00000512928 DGKEP52429 567 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 COG7P83436 770 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 MESP2Q0VG99 397 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 KCNJ12Q14500 433 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 STILQ15468 1287 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 CNGA2Q16280 664 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 MAN2A1Q16706 1144 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 EXOC3L4Q17RC7 722 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 GAB4Q2WGN9 574 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 PREPLQ4J6C6 727 aaPredicted RBP6.81□□□□□ -1.32
KDM3B-208ENST00000512928 RAB41Q5JT25 222 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 BSPRYQ5W0U4 402 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 PMF1Q6P1K2 205 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 KLHDC10Q6PID8 442 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 TRIM65Q6PJ69 517 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 SASS6Q6UVJ0 657 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 LCLAT1Q6UWP7 414 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 MAMSTRQ6ZN01 415 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 NUDT18Q6ZVK8 323 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 HTR3DQ70Z44 454 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 SYT13Q7L8C5 426 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 WDR5BQ86VZ2 330 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 PASD1Q8IV76 773 aa6.81□□□□□ -1.32
KDM3B-208ENST00000512928 FMNL3Q8IVF7 1028 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms