RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 GRIN3AQ8TCU5 1115 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 ARHGEF26Q96DR7 871 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 HAPLN3Q96S86 360 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 ACE2Q9BYF1 805 aaPredicted RBP9.19□□□□□ -0.94
VCAN-208ENST00000512590 HAUS4Q9H6D7 363 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 USP20Q9Y2K6 914 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 COLEC10Q9Y6Z7 277 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 UTYO14607 1347 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 COL15A1P39059 1388 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 FSBPO95073 299 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 GLP2RO95838 553 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 EPHB2P29323 1055 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 TCF7P36402 384 aaPredicted RBP9.19□□□□□ -0.94
VCAN-208ENST00000512590 SLC26A3P40879 764 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 MTA1Q13330 715 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 CBWD3Q5JTY5 395 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 CBWD5Q5RIA9 395 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 TYW3Q6IPR3 259 aaKnown RBP9.19□□□□□ -0.94
VCAN-208ENST00000512590 NAPEPLDQ6IQ20 393 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 PPP1R18Q6NYC8 613 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 PSRC1Q6PGN9 363 aaPredicted RBP9.19□□□□□ -0.94
VCAN-208ENST00000512590 TAF8Q7Z7C8 310 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 PRUNE1Q86TP1 453 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 LINC00523Q86TU6 105 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 KIAA2013Q8IYS2 634 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 ZSCAN4Q8NAM6 433 aaPredicted RBP9.19□□□□□ -0.94
VCAN-208ENST00000512590 SMPDL3BQ92485 455 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 TMA16Q96EY4 203 aaKnown RBP9.19□□□□□ -0.94
VCAN-208ENST00000512590 CYLDQ9NQC7 956 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 DPP3Q9NY33 737 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 DNMBPQ6XZF7 1577 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 GAS2O43903 313 aaKnown RBP9.18□□□□□ -0.94
VCAN-208ENST00000512590 EPN2O95208 641 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 TCEA1P23193 301 aaKnown RBP9.18□□□□□ -0.94
VCAN-208ENST00000512590 TALDO1P37837 337 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 ATXN1P54253 815 aaKnown RBP9.18□□□□□ -0.94
VCAN-208ENST00000512590 SEC13P55735 322 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 ZBED6P86452 979 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 ZNF827Q17R98 1081 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 EPC2Q52LR7 807 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 ZNF484Q5JVG2 852 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 PMF1Q6P1K2 205 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 TRAF7Q6Q0C0 670 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 DEPDC4Q8N2C3 294 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 SETD6Q8TBK2 473 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 THUMPD3Q9BV44 507 aaKnown RBP9.18□□□□□ -0.94
VCAN-208ENST00000512590 ELOVL6Q9H5J4 265 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 PDGFCQ9NRA1 345 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 DDIT4Q9NX09 232 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 ZNF232Q9UNY5 417 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 TIAM1Q13009 1591 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 TRIM38O00635 465 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 RRP9O43818 475 aaKnown RBP9.18□□□□□ -0.94
VCAN-208ENST00000512590 KIF1CO43896 1103 aaKnown RBP9.18□□□□□ -0.94
VCAN-208ENST00000512590 CIAO1O76071 339 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 NR3C1P04150 777 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 ENO1P06733 434 aaKnown RBP9.18□□□□□ -0.94
VCAN-208ENST00000512590 CHRNB4P30926 498 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 RPL4P36578 427 aaKnown RBP9.18□□□□□ -0.94
VCAN-208ENST00000512590 DNAJC3Q13217 504 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 HDAC1Q13547 482 aaPredicted RBP9.18□□□□□ -0.94
VCAN-208ENST00000512590 C1DQ13901 141 aaKnown RBP9.18□□□□□ -0.94
VCAN-208ENST00000512590 FAM133BQ5BKY9 247 aaKnown RBP9.18□□□□□ -0.94
VCAN-208ENST00000512590 STYK1Q6J9G0 422 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 LZTR1Q8N653 840 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 ZNF564Q8TBZ8 553 aaPredicted RBP9.18□□□□□ -0.94
VCAN-208ENST00000512590 ITCHQ96J02 903 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 CALR3Q96L12 384 aaKnown RBP9.18□□□□□ -0.94
VCAN-208ENST00000512590 QRFPRQ96P65 431 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 PPP1R14DQ9NXH3 145 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 SH3BP4Q9P0V3 963 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 GLS2Q9UI32 602 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 SCAF8Q9UPN6 1271 aaKnown RBP9.18□□□□□ -0.94
VCAN-208ENST00000512590 STARD13Q9Y3M8 1113 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 DGAT1O75907 488 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 CTSOP43234 321 aaPredicted RBP9.18□□□□□ -0.94
VCAN-208ENST00000512590 MAGEA10P43363 369 aaPredicted RBP9.18□□□□□ -0.94
VCAN-208ENST00000512590 TGFB2P61812 414 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 RAP1GAP2Q684P5 730 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 CHRDL2Q6WN34 429 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 ATCAYQ86WG3 371 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 CENPLQ8N0S6 344 aaPredicted RBP9.18□□□□□ -0.94
VCAN-208ENST00000512590 PCYOX1LQ8NBM8 494 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 SLC44A5Q8NCS7 719 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 FAM81AQ8TBF8 368 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.18□□□□□ -0.94
VCAN-208ENST00000512590 OR6B1O95007 311 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 GLUD1P00367 558 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 ITGA9Q13797 1035 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 FRS2Q8WU20 508 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 CNBD2Q96M20 576 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 PUS3Q9BZE2 481 aaKnown RBP9.18□□□□□ -0.94
VCAN-208ENST00000512590 STK39Q9UEW8 545 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 BLOC1S6Q9UL45 172 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 DIS3Q9Y2L1 958 aaKnown RBP9.18□□□□□ -0.94
VCAN-208ENST00000512590 PCDHA13Q9Y5I0 950 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 SUPT6HQ7KZ85 1726 aaKnown RBP9.18□□□□□ -0.94
VCAN-208ENST00000512590 MROH7-TTC4A0A0A0MT08 1334 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 MEIS2O14770 477 aa9.18□□□□□ -0.94
VCAN-208ENST00000512590 AKAP10O43572 662 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms