RNA–Protein interactions for RNA: ENST00000511978.5

MATR3-218, Transcript of matrin 3, human

TSL 3

Gene MATR3, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-218	ENST00000511978	TRIM43	Q96BQ3	446 aa	Predicted RBP	6.29	□□□□□ -1.4
MATR3-218	ENST00000511978	NMD3	Q96D46	503 aa	Known RBP	6.29	□□□□□ -1.4
MATR3-218	ENST00000511978	WDR90	Q96KV7	1748 aa		6.29	□□□□□ -1.4
MATR3-218	ENST00000511978	PSMD1	Q99460	953 aa		6.29	□□□□□ -1.4
MATR3-218	ENST00000511978	APOL5	Q9BWW9	433 aa		6.29	□□□□□ -1.4
MATR3-218	ENST00000511978	ZNF518B	Q9C0D4	1074 aa		6.29	□□□□□ -1.4
MATR3-218	ENST00000511978	BTBD1	Q9H0C5	482 aa		6.29	□□□□□ -1.4
MATR3-218	ENST00000511978	TMX4	Q9H1E5	349 aa	Predicted RBP	6.29	□□□□□ -1.4
MATR3-218	ENST00000511978	NUP62CL	Q9H1M0	184 aa		6.29	□□□□□ -1.4
MATR3-218	ENST00000511978	KIAA1586	Q9HCI6	787 aa		6.29	□□□□□ -1.4
MATR3-218	ENST00000511978	TBCCD1	Q9NVR7	557 aa		6.29	□□□□□ -1.4
MATR3-218	ENST00000511978	SYBU	Q9NX95	663 aa		6.29	□□□□□ -1.4
MATR3-218	ENST00000511978	FAM50B	Q9Y247	325 aa		6.29	□□□□□ -1.4
MATR3-218	ENST00000511978	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	6.29	□□□□□ -1.4
MATR3-218	ENST00000511978	PQBP1	O60828	265 aa	Known RBP	6.28	□□□□□ -1.4
MATR3-218	ENST00000511978	ATXN1L	P0C7T5	689 aa	Known RBP	6.28	□□□□□ -1.4
MATR3-218	ENST00000511978	ITGAL	P20701	1170 aa		6.28	□□□□□ -1.4
MATR3-218	ENST00000511978	NDUFV1	P49821	464 aa		6.28	□□□□□ -1.4
MATR3-218	ENST00000511978	WNT3	P56703	355 aa		6.28	□□□□□ -1.4
MATR3-218	ENST00000511978	BLOC1S1	P78537	153 aa		6.28	□□□□□ -1.4
MATR3-218	ENST00000511978	IQCB1	Q15051	598 aa		6.28	□□□□□ -1.4
MATR3-218	ENST00000511978		Q6YL49	198 aa		6.28	□□□□□ -1.4
MATR3-218	ENST00000511978	SESTD1	Q86VW0	696 aa		6.28	□□□□□ -1.4
MATR3-218	ENST00000511978	SSH3	Q8TE77	659 aa		6.28	□□□□□ -1.4
MATR3-218	ENST00000511978	NEU4	Q8WWR8	484 aa	Predicted RBP	6.28	□□□□□ -1.4
MATR3-218	ENST00000511978	PTCD3	Q96EY7	689 aa	Known RBP	6.28	□□□□□ -1.4
MATR3-218	ENST00000511978	API5	Q9BZZ5	524 aa	Known RBP	6.28	□□□□□ -1.4
MATR3-218	ENST00000511978	TTYH3	Q9C0H2	523 aa		6.28	□□□□□ -1.4
MATR3-218	ENST00000511978	ZNF287	Q9HBT7	754 aa		6.28	□□□□□ -1.4
MATR3-218	ENST00000511978	C9orf78	Q9NZ63	289 aa	Predicted RBP	6.28	□□□□□ -1.4
MATR3-218	ENST00000511978	AFF4	Q9UHB7	1163 aa	Known RBP	6.28	□□□□□ -1.4
MATR3-218	ENST00000511978	OGDHL	Q9ULD0	1010 aa		6.28	□□□□□ -1.4
MATR3-218	ENST00000511978	COL4A3	Q01955	1670 aa		6.28	□□□□□ -1.4
MATR3-218	ENST00000511978	UTY	O14607	1347 aa		6.27	□□□□□ -1.41
MATR3-218	ENST00000511978	ZNF541	Q9H0D2	1346 aa		6.27	□□□□□ -1.41
MATR3-218	ENST00000511978		A0A0B4J269	797 aa		6.27	□□□□□ -1.41
MATR3-218	ENST00000511978	TMEM233	B4DJY2	109 aa		6.27	□□□□□ -1.41
MATR3-218	ENST00000511978	MYO1C	O00159	1063 aa		6.27	□□□□□ -1.41
MATR3-218	ENST00000511978	PPIP5K2	O43314	1243 aa		6.27	□□□□□ -1.41
MATR3-218	ENST00000511978	BCAR3	O75815	825 aa		6.27	□□□□□ -1.41
MATR3-218	ENST00000511978	MAP4K4	O95819	1239 aa	Predicted RBP	6.27	□□□□□ -1.41
MATR3-218	ENST00000511978	NBPF7	P0C2Y1	421 aa	Predicted RBP	6.27	□□□□□ -1.41
MATR3-218	ENST00000511978	RPL17	P18621	184 aa	Known RBP	6.27	□□□□□ -1.41
MATR3-218	ENST00000511978	TGM1	P22735	817 aa		6.27	□□□□□ -1.41
MATR3-218	ENST00000511978	RPS8	P62241	208 aa	Known RBP	6.27	□□□□□ -1.41
MATR3-218	ENST00000511978	TAP1	Q03518	808 aa		6.27	□□□□□ -1.41
MATR3-218	ENST00000511978	TUBB3	Q13509	450 aa		6.27	□□□□□ -1.41
MATR3-218	ENST00000511978	RAB32	Q13637	225 aa		6.27	□□□□□ -1.41
MATR3-218	ENST00000511978	ANKRD18A	Q8IVF6	992 aa		6.27	□□□□□ -1.41
MATR3-218	ENST00000511978	FAM109A	Q8N4B1	249 aa		6.27	□□□□□ -1.41
MATR3-218	ENST00000511978	AMER2	Q8N7J2	671 aa		6.27	□□□□□ -1.41
MATR3-218	ENST00000511978	SUPT20H	Q8NEM7	779 aa		6.27	□□□□□ -1.41
MATR3-218	ENST00000511978	SLC30A5	Q8TAD4	765 aa		6.27	□□□□□ -1.41
MATR3-218	ENST00000511978	LINC00476	Q8WZB0	136 aa		6.27	□□□□□ -1.41
MATR3-218	ENST00000511978	PHKB	Q93100	1093 aa		6.27	□□□□□ -1.41
MATR3-218	ENST00000511978	MSLNL	Q96KJ4	702 aa		6.27	□□□□□ -1.41
MATR3-218	ENST00000511978		Q96MF0	132 aa		6.27	□□□□□ -1.41
MATR3-218	ENST00000511978	MOGAT1	Q96PD6	335 aa		6.27	□□□□□ -1.41
MATR3-218	ENST00000511978	OSBPL9	Q96SU4	736 aa		6.27	□□□□□ -1.41
MATR3-218	ENST00000511978	MESP1	Q9BRJ9	268 aa		6.27	□□□□□ -1.41
MATR3-218	ENST00000511978	SCAND2P	Q9GZW5	306 aa	Predicted RBP	6.27	□□□□□ -1.41
MATR3-218	ENST00000511978	SACM1L	Q9NTJ5	587 aa		6.27	□□□□□ -1.41
MATR3-218	ENST00000511978	COL20A1	Q9P218	1284 aa		6.27	□□□□□ -1.41
MATR3-218	ENST00000511978	TES	Q9UGI8	421 aa	Known RBP	6.27	□□□□□ -1.41
MATR3-218	ENST00000511978	PAXBP1	Q9Y5B6	917 aa		6.27	□□□□□ -1.41
MATR3-218	ENST00000511978	ANO9	A1A5B4	782 aa		6.26	□□□□□ -1.41
MATR3-218	ENST00000511978	GLTPD2	A6NH11	291 aa		6.26	□□□□□ -1.41
MATR3-218	ENST00000511978		F5H697	171 aa		6.26	□□□□□ -1.41
MATR3-218	ENST00000511978	PMM2	O15305	246 aa		6.26	□□□□□ -1.41
MATR3-218	ENST00000511978	UFL1	O94874	794 aa		6.26	□□□□□ -1.41
MATR3-218	ENST00000511978	MYL1	P05976	194 aa		6.26	□□□□□ -1.41
MATR3-218	ENST00000511978	CSF1R	P07333	972 aa		6.26	□□□□□ -1.41
MATR3-218	ENST00000511978	CYP2C9	P11712	490 aa		6.26	□□□□□ -1.41
MATR3-218	ENST00000511978	IGHMBP2	P38935	993 aa	Known RBP	6.26	□□□□□ -1.41
MATR3-218	ENST00000511978	GDF5	P43026	501 aa		6.26	□□□□□ -1.41
MATR3-218	ENST00000511978	CCT4	P50991	539 aa	Known RBP	6.26	□□□□□ -1.41
MATR3-218	ENST00000511978	LOXL3	P58215	753 aa		6.26	□□□□□ -1.41
MATR3-218	ENST00000511978	C3orf38	Q5JPI3	329 aa		6.26	□□□□□ -1.41
MATR3-218	ENST00000511978	EPHA10	Q5JZY3	1008 aa		6.26	□□□□□ -1.41
MATR3-218	ENST00000511978	RBM20	Q5T481	1227 aa	Known RBP	6.26	□□□□□ -1.41
MATR3-218	ENST00000511978	TMEM108	Q6UXF1	575 aa		6.26	□□□□□ -1.41
MATR3-218	ENST00000511978	USP51	Q70EK9	711 aa		6.26	□□□□□ -1.41
MATR3-218	ENST00000511978	NOL8	Q76FK4	1167 aa	Known RBP	6.26	□□□□□ -1.41
MATR3-218	ENST00000511978	LCORL	Q8N3X6	602 aa		6.26	□□□□□ -1.41
MATR3-218	ENST00000511978	OR56A3	Q8NH54	315 aa		6.26	□□□□□ -1.41
MATR3-218	ENST00000511978	LPIN2	Q92539	896 aa		6.26	□□□□□ -1.41
MATR3-218	ENST00000511978	ARHGAP45	Q92619	1136 aa		6.26	□□□□□ -1.41
MATR3-218	ENST00000511978	FRAT1	Q92837	279 aa	Predicted RBP	6.26	□□□□□ -1.41
MATR3-218	ENST00000511978	COQ10A	Q96MF6	247 aa		6.26	□□□□□ -1.41
MATR3-218	ENST00000511978	CASS4	Q9NQ75	786 aa		6.26	□□□□□ -1.41
MATR3-218	ENST00000511978	A1CF	Q9NQ94	594 aa	Known RBP	6.26	□□□□□ -1.41
MATR3-218	ENST00000511978	KCTD5	Q9NXV2	234 aa		6.26	□□□□□ -1.41
MATR3-218	ENST00000511978	SCN4A	P35499	1836 aa		6.26	□□□□□ -1.41
MATR3-218	ENST00000511978	MAST3	O60307	1309 aa		6.25	□□□□□ -1.41
MATR3-218	ENST00000511978	ANKRD18B	A2A2Z9	1011 aa		6.25	□□□□□ -1.41
MATR3-218	ENST00000511978	IPO8	O15397	1037 aa	Known RBP	6.25	□□□□□ -1.41
MATR3-218	ENST00000511978	PROM1	O43490	865 aa		6.25	□□□□□ -1.41
MATR3-218	ENST00000511978	TRIAP1	O43715	76 aa		6.25	□□□□□ -1.41
MATR3-218	ENST00000511978	FSHB	P01225	129 aa		6.25	□□□□□ -1.41
MATR3-218	ENST00000511978	HKR1	P10072	659 aa		6.25	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms