RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 ELMO3Q96BJ8 720 aa20.13■□□□□ 0.81
HMGCS1-206ENST00000511774 OSER1Q9NX31 292 aa20.13■□□□□ 0.81
HMGCS1-206ENST00000511774 PLK2Q9NYY3 685 aa20.13■□□□□ 0.81
HMGCS1-206ENST00000511774 EIF2B4Q9UI10 523 aaKnown RBP20.13■□□□□ 0.81
HMGCS1-206ENST00000511774 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.13■□□□□ 0.81
HMGCS1-206ENST00000511774 TP53BP1Q12888 1972 aaPredicted RBP20.12■□□□□ 0.81
HMGCS1-206ENST00000511774 ZNF233A6NK53 670 aa20.12■□□□□ 0.81
HMGCS1-206ENST00000511774 METTL12A8MUP2 240 aa20.12■□□□□ 0.81
HMGCS1-206ENST00000511774 GFRA2O00451 464 aa20.12■□□□□ 0.81
HMGCS1-206ENST00000511774 TLR5O60602 858 aa20.12■□□□□ 0.81
HMGCS1-206ENST00000511774 BEST1O76090 585 aa20.12■□□□□ 0.81
HMGCS1-206ENST00000511774 CER1O95813 267 aa20.12■□□□□ 0.81
HMGCS1-206ENST00000511774 IDEP14735 1019 aa20.12■□□□□ 0.81
HMGCS1-206ENST00000511774 DGKGP49619 791 aa20.12■□□□□ 0.81
HMGCS1-206ENST00000511774 TPMTP51580 245 aa20.12■□□□□ 0.81
HMGCS1-206ENST00000511774 PTPRNQ16849 979 aa20.12■□□□□ 0.81
HMGCS1-206ENST00000511774 WDR72Q3MJ13 1102 aa20.12■□□□□ 0.81
HMGCS1-206ENST00000511774 WDR49Q8IV35 697 aa20.12■□□□□ 0.81
HMGCS1-206ENST00000511774 PIP4K2CQ8TBX8 421 aa20.12■□□□□ 0.81
HMGCS1-206ENST00000511774 HPS3Q969F9 1004 aa20.12■□□□□ 0.81
HMGCS1-206ENST00000511774 STK17AQ9UEE5 414 aa20.12■□□□□ 0.81
HMGCS1-206ENST00000511774 FBXO10Q9UK96 956 aa20.12■□□□□ 0.81
HMGCS1-206ENST00000511774 R3HCC1Q9Y3T6 440 aaKnown RBP20.12■□□□□ 0.81
HMGCS1-206ENST00000511774 A8MXQ7 604 aa20.11■□□□□ 0.81
HMGCS1-206ENST00000511774 H3BQV1 296 aa20.11■□□□□ 0.81
HMGCS1-206ENST00000511774 IL12RB1P42701 662 aa20.11■□□□□ 0.81
HMGCS1-206ENST00000511774 CSNK1EP49674 416 aaKnown RBP20.11■□□□□ 0.81
HMGCS1-206ENST00000511774 CDH8P55286 799 aa20.11■□□□□ 0.81
HMGCS1-206ENST00000511774 CADM4Q8NFZ8 388 aa20.11■□□□□ 0.81
HMGCS1-206ENST00000511774 SLC39A7Q92504 469 aa20.11■□□□□ 0.81
HMGCS1-206ENST00000511774 ZNF516Q92618 1163 aa20.11■□□□□ 0.81
HMGCS1-206ENST00000511774 DCBLD2Q96PD2 775 aa20.11■□□□□ 0.81
HMGCS1-206ENST00000511774 XPO6Q96QU8 1125 aaKnown RBP20.11■□□□□ 0.81
HMGCS1-206ENST00000511774 UBL7Q96S82 380 aaPredicted RBP20.11■□□□□ 0.81
HMGCS1-206ENST00000511774 XYLT2Q9H1B5 865 aa20.11■□□□□ 0.81
HMGCS1-206ENST00000511774 SMYD3Q9H7B4 428 aa20.11■□□□□ 0.81
HMGCS1-206ENST00000511774 HSPBP1Q9NZL4 362 aa20.11■□□□□ 0.81
HMGCS1-206ENST00000511774 PCDHGB2Q9Y5G2 931 aa20.11■□□□□ 0.81
HMGCS1-206ENST00000511774 MYO18BQ8IUG5 2567 aa20.1■□□□□ 0.81
HMGCS1-206ENST00000511774 A0A087X0B3 334 aa20.1■□□□□ 0.81
HMGCS1-206ENST00000511774 KCNK3O14649 394 aa20.1■□□□□ 0.81
HMGCS1-206ENST00000511774 MDM4O15151 490 aa20.1■□□□□ 0.81
HMGCS1-206ENST00000511774 FLRT2O43155 660 aa20.1■□□□□ 0.81
HMGCS1-206ENST00000511774 COPAP53621 1224 aa20.1■□□□□ 0.81
HMGCS1-206ENST00000511774 CLDN6P56747 220 aa20.1■□□□□ 0.81
HMGCS1-206ENST00000511774 MYL6P60660 151 aa20.1■□□□□ 0.81
HMGCS1-206ENST00000511774 C19orf57Q0VDD7 668 aa20.1■□□□□ 0.81
HMGCS1-206ENST00000511774 ENPP2Q13822 863 aa20.1■□□□□ 0.81
HMGCS1-206ENST00000511774 SMAD1Q15797 465 aaKnown RBP20.1■□□□□ 0.81
HMGCS1-206ENST00000511774 KIF19Q2TAC6 998 aa20.1■□□□□ 0.81
HMGCS1-206ENST00000511774 SV2BQ7L1I2 683 aa20.1■□□□□ 0.81
HMGCS1-206ENST00000511774 CACUL1Q86Y37 369 aa20.1■□□□□ 0.81
HMGCS1-206ENST00000511774 FUKQ8N0W3 1084 aa20.1■□□□□ 0.81
HMGCS1-206ENST00000511774 CLIC6Q96NY7 704 aa20.1■□□□□ 0.81
HMGCS1-206ENST00000511774 CDC6Q99741 560 aa20.1■□□□□ 0.81
HMGCS1-206ENST00000511774 SMOQ99835 787 aa20.1■□□□□ 0.81
HMGCS1-206ENST00000511774 WDR35Q9P2L0 1181 aa20.1■□□□□ 0.81
HMGCS1-206ENST00000511774 HECTD1Q9ULT8 2610 aa20.09■□□□□ 0.81
HMGCS1-206ENST00000511774 FAM163BP0C2L3 166 aa20.09■□□□□ 0.81
HMGCS1-206ENST00000511774 DLATP10515 647 aaKnown RBP20.09■□□□□ 0.81
HMGCS1-206ENST00000511774 ALCAMQ13740 583 aa20.09■□□□□ 0.81
HMGCS1-206ENST00000511774 GEN1Q17RS7 908 aa20.09■□□□□ 0.81
HMGCS1-206ENST00000511774 CCDC157Q569K6 752 aa20.09■□□□□ 0.81
HMGCS1-206ENST00000511774 KCNT1Q5JUK3 1230 aa20.09■□□□□ 0.81
HMGCS1-206ENST00000511774 DHRS13Q6UX07 377 aa20.09■□□□□ 0.81
HMGCS1-206ENST00000511774 LAYNQ6UX15 382 aa20.09■□□□□ 0.81
HMGCS1-206ENST00000511774 Q6ZNB5 142 aa20.09■□□□□ 0.81
HMGCS1-206ENST00000511774 GPRIN1Q7Z2K8 1008 aa20.09■□□□□ 0.81
HMGCS1-206ENST00000511774 TMPRSS6Q8IU80 811 aa20.09■□□□□ 0.81
HMGCS1-206ENST00000511774 GALNT15Q8N3T1 639 aa20.09■□□□□ 0.81
HMGCS1-206ENST00000511774 RDH13Q8NBN7 331 aa20.09■□□□□ 0.81
HMGCS1-206ENST00000511774 SDCBP2Q9H190 292 aa20.09■□□□□ 0.81
HMGCS1-206ENST00000511774 DMAP1Q9NPF5 467 aaPredicted RBP20.09■□□□□ 0.81
HMGCS1-206ENST00000511774 PANK4Q9NVE7 773 aa20.09■□□□□ 0.81
HMGCS1-206ENST00000511774 THAP10Q9P2Z0 257 aaPredicted RBP20.09■□□□□ 0.81
HMGCS1-206ENST00000511774 NXF1Q9UBU9 619 aaKnown RBP20.09■□□□□ 0.81
HMGCS1-206ENST00000511774 FBXO2Q9UK22 296 aaPredicted RBP20.09■□□□□ 0.81
HMGCS1-206ENST00000511774 NUDT5Q9UKK9 219 aa20.09■□□□□ 0.81
HMGCS1-206ENST00000511774 KIF3AQ9Y496 699 aa20.09■□□□□ 0.81
HMGCS1-206ENST00000511774 RAI2Q9Y5P3 530 aa20.09■□□□□ 0.81
HMGCS1-206ENST00000511774 SNX11Q9Y5W9 270 aa20.09■□□□□ 0.81
HMGCS1-206ENST00000511774 CLIC4Q9Y696 253 aa20.09■□□□□ 0.81
HMGCS1-206ENST00000511774 MYLKQ15746 1914 aa20.09■□□□□ 0.81
HMGCS1-206ENST00000511774 PLK4O00444 970 aa20.08■□□□□ 0.81
HMGCS1-206ENST00000511774 TLX3O43711 291 aaPredicted RBP20.08■□□□□ 0.81
HMGCS1-206ENST00000511774 CD2BP2O95400 341 aaKnown RBP20.08■□□□□ 0.81
HMGCS1-206ENST00000511774 IGLV3-19P01714 112 aa20.08■□□□□ 0.81
HMGCS1-206ENST00000511774 PLA2G2AP14555 144 aa20.08■□□□□ 0.81
HMGCS1-206ENST00000511774 ACO1P21399 889 aaKnown RBP20.08■□□□□ 0.81
HMGCS1-206ENST00000511774 ABCG1P45844 678 aa20.08■□□□□ 0.81
HMGCS1-206ENST00000511774 TNNC1P63316 161 aa20.08■□□□□ 0.81
HMGCS1-206ENST00000511774 SURF1Q15526 300 aa20.08■□□□□ 0.81
HMGCS1-206ENST00000511774 RRAGBQ5VZM2 374 aa20.08■□□□□ 0.81
HMGCS1-206ENST00000511774 PDCD7Q8N8D1 485 aaKnown RBP20.08■□□□□ 0.81
HMGCS1-206ENST00000511774 CGRRF1Q99675 332 aa20.08■□□□□ 0.81
HMGCS1-206ENST00000511774 MED10Q9BTT4 135 aa20.08■□□□□ 0.81
HMGCS1-206ENST00000511774 NACA2Q9H009 215 aa20.08■□□□□ 0.81
HMGCS1-206ENST00000511774 PRORYQ9H606 182 aa20.08■□□□□ 0.81
HMGCS1-206ENST00000511774 KRT82Q9NSB4 513 aa20.08■□□□□ 0.81
HMGCS1-206ENST00000511774 KIAA0391O15091 583 aaKnown RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms