RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 OTUB2Q96DC9 234 aa7.49□□□□□ -1.21
PDLIM5-215ENST00000511586 PPP1R13BQ96KQ4 1090 aa7.49□□□□□ -1.21
PDLIM5-215ENST00000511586 CPXM1Q96SM3 734 aa7.49□□□□□ -1.21
PDLIM5-215ENST00000511586 TRIM62Q9BVG3 475 aa7.49□□□□□ -1.21
PDLIM5-215ENST00000511586 OSBPL6Q9BZF3 934 aa7.49□□□□□ -1.21
PDLIM5-215ENST00000511586 ECT2Q9H8V3 914 aa7.49□□□□□ -1.21
PDLIM5-215ENST00000511586 HPS4Q9NQG7 708 aa7.49□□□□□ -1.21
PDLIM5-215ENST00000511586 MARCH2Q9P0N8 246 aa7.49□□□□□ -1.21
PDLIM5-215ENST00000511586 RASAL2Q9UJF2 1139 aa7.49□□□□□ -1.21
PDLIM5-215ENST00000511586 LSM7Q9UK45 103 aaKnown RBP7.49□□□□□ -1.21
PDLIM5-215ENST00000511586 MYO6Q9UM54 1294 aa7.49□□□□□ -1.21
PDLIM5-215ENST00000511586 MYH10P35580 1976 aa7.49□□□□□ -1.21
PDLIM5-215ENST00000511586 ZNF638Q14966 1978 aaKnown RBP7.49□□□□□ -1.21
PDLIM5-215ENST00000511586 OBSL1O75147 1896 aa7.49□□□□□ -1.21
PDLIM5-215ENST00000511586 NUP210Q8TEM1 1887 aaPredicted RBP7.49□□□□□ -1.21
PDLIM5-215ENST00000511586 ANAPC1Q9H1A4 1944 aa7.48□□□□□ -1.21
PDLIM5-215ENST00000511586 SLC12A8A0AV02 714 aa7.48□□□□□ -1.21
PDLIM5-215ENST00000511586 OTOL1A6NHN0 477 aaPredicted RBP7.48□□□□□ -1.21
PDLIM5-215ENST00000511586 SHISA7A6NL88 538 aa7.48□□□□□ -1.21
PDLIM5-215ENST00000511586 CAPN9O14815 690 aa7.48□□□□□ -1.21
PDLIM5-215ENST00000511586 PAPSS1O43252 624 aaPredicted RBP7.48□□□□□ -1.21
PDLIM5-215ENST00000511586 PI15O43692 258 aa7.48□□□□□ -1.21
PDLIM5-215ENST00000511586 STC2O76061 302 aa7.48□□□□□ -1.21
PDLIM5-215ENST00000511586 TPM3P06753 285 aa7.48□□□□□ -1.21
PDLIM5-215ENST00000511586 DCNP07585 359 aaKnown RBP7.48□□□□□ -1.21
PDLIM5-215ENST00000511586 MMEP08473 750 aa7.48□□□□□ -1.21
PDLIM5-215ENST00000511586 NCAM1P13591 858 aa7.48□□□□□ -1.21
PDLIM5-215ENST00000511586 FERP16591 822 aa7.48□□□□□ -1.21
PDLIM5-215ENST00000511586 TARSP26639 723 aaKnown RBP7.48□□□□□ -1.21
PDLIM5-215ENST00000511586 HOXD11P31277 338 aaPredicted RBP7.48□□□□□ -1.21
PDLIM5-215ENST00000511586 CTHP32929 405 aa7.48□□□□□ -1.21
PDLIM5-215ENST00000511586 CDH5P33151 784 aaPredicted RBP7.48□□□□□ -1.21
PDLIM5-215ENST00000511586 SOX9P48436 509 aa7.48□□□□□ -1.21
PDLIM5-215ENST00000511586 NUBP1P53384 320 aa7.48□□□□□ -1.21
PDLIM5-215ENST00000511586 VCPP55072 806 aaKnown RBP7.48□□□□□ -1.21
PDLIM5-215ENST00000511586 YWHAZP63104 245 aaKnown RBP7.48□□□□□ -1.21
PDLIM5-215ENST00000511586 CDR2Q01850 454 aa7.48□□□□□ -1.21
PDLIM5-215ENST00000511586 ARID5AQ03989 594 aa7.48□□□□□ -1.21
PDLIM5-215ENST00000511586 EFEMP1Q12805 493 aa7.48□□□□□ -1.21
PDLIM5-215ENST00000511586 EFHC1Q5JVL4 640 aa7.48□□□□□ -1.21
PDLIM5-215ENST00000511586 MSANTD2Q6P1R3 559 aa7.48□□□□□ -1.21
PDLIM5-215ENST00000511586 TRIM72Q6ZMU5 477 aa7.48□□□□□ -1.21
PDLIM5-215ENST00000511586 ZDHHC17Q8IUH5 632 aa7.48□□□□□ -1.21
PDLIM5-215ENST00000511586 BBS7Q8IWZ6 715 aa7.48□□□□□ -1.21
PDLIM5-215ENST00000511586 TMEM105Q8N8V8 129 aa7.48□□□□□ -1.21
PDLIM5-215ENST00000511586 MSANTD4Q8NCY6 345 aa7.48□□□□□ -1.21
PDLIM5-215ENST00000511586 IPO4Q8TEX9 1081 aaKnown RBP7.48□□□□□ -1.21
PDLIM5-215ENST00000511586 FAM149B1Q96BN6 582 aa7.48□□□□□ -1.21
PDLIM5-215ENST00000511586 NUP58Q9BVL2 599 aa7.48□□□□□ -1.21
PDLIM5-215ENST00000511586 EDEM3Q9BZQ6 932 aa7.48□□□□□ -1.21
PDLIM5-215ENST00000511586 FOXQ1Q9C009 403 aa7.48□□□□□ -1.21
PDLIM5-215ENST00000511586 DCLK3Q9C098 648 aa7.48□□□□□ -1.21
PDLIM5-215ENST00000511586 SYNCQ9H7C4 482 aa7.48□□□□□ -1.21
PDLIM5-215ENST00000511586 POPDC2Q9HBU9 364 aa7.48□□□□□ -1.21
PDLIM5-215ENST00000511586 LTB4R2Q9NPC1 389 aa7.48□□□□□ -1.21
PDLIM5-215ENST00000511586 IFNKQ9P0W0 207 aa7.48□□□□□ -1.21
PDLIM5-215ENST00000511586 NOCTQ9UK39 431 aaKnown RBP7.48□□□□□ -1.21
PDLIM5-215ENST00000511586 NDRG2Q9UN36 371 aaKnown RBP7.48□□□□□ -1.21
PDLIM5-215ENST00000511586 ZNF510Q9Y2H8 683 aa7.48□□□□□ -1.21
PDLIM5-215ENST00000511586 MTF2Q9Y483 593 aaPredicted RBP7.48□□□□□ -1.21
PDLIM5-215ENST00000511586 PATJQ8NI35 1801 aa7.48□□□□□ -1.21
PDLIM5-215ENST00000511586 SCAMP3O14828 347 aaKnown RBP7.47□□□□□ -1.21
PDLIM5-215ENST00000511586 CBFA2T2O43439 604 aa7.47□□□□□ -1.21
PDLIM5-215ENST00000511586 GREM1O60565 184 aa7.47□□□□□ -1.21
PDLIM5-215ENST00000511586 ADH1CP00326 375 aa7.47□□□□□ -1.21
PDLIM5-215ENST00000511586 ERBB2P04626 1255 aa7.47□□□□□ -1.21
PDLIM5-215ENST00000511586 FYNP06241 537 aa7.47□□□□□ -1.21
PDLIM5-215ENST00000511586 GLI1P08151 1106 aa7.47□□□□□ -1.21
PDLIM5-215ENST00000511586 HMBSP08397 361 aa7.47□□□□□ -1.21
PDLIM5-215ENST00000511586 CHRNB2P17787 502 aa7.47□□□□□ -1.21
PDLIM5-215ENST00000511586 CORO1AP31146 461 aaKnown RBP7.47□□□□□ -1.21
PDLIM5-215ENST00000511586 GJA4P35212 333 aa7.47□□□□□ -1.21
PDLIM5-215ENST00000511586 CHKAP35790 457 aa7.47□□□□□ -1.21
PDLIM5-215ENST00000511586 PBX1P40424 430 aa7.47□□□□□ -1.21
PDLIM5-215ENST00000511586 MAGEA9P43362 315 aa7.47□□□□□ -1.21
PDLIM5-215ENST00000511586 HARS2P49590 506 aaKnown RBP7.47□□□□□ -1.21
PDLIM5-215ENST00000511586 NOMO3P69849 1222 aa7.47□□□□□ -1.21
PDLIM5-215ENST00000511586 FMO1Q01740 532 aa7.47□□□□□ -1.21
PDLIM5-215ENST00000511586 GRSF1Q12849 480 aaKnown RBP eCLIP7.47□□□□□ -1.21
PDLIM5-215ENST00000511586 DHCR24Q15392 516 aa7.47□□□□□ -1.21
PDLIM5-215ENST00000511586 TRIP4Q15650 581 aaPredicted RBP7.47□□□□□ -1.21
PDLIM5-215ENST00000511586 PTPN20Q4JDL3 420 aa7.47□□□□□ -1.21
PDLIM5-215ENST00000511586 FIGNQ5HY92 759 aa7.47□□□□□ -1.21
PDLIM5-215ENST00000511586 NAA35Q5VZE5 725 aa7.47□□□□□ -1.21
PDLIM5-215ENST00000511586 OR6B2Q6IFH4 312 aa7.47□□□□□ -1.21
PDLIM5-215ENST00000511586 RHBDF2Q6PJF5 856 aa7.47□□□□□ -1.21
PDLIM5-215ENST00000511586 TXNDC11Q6PKC3 985 aa7.47□□□□□ -1.21
PDLIM5-215ENST00000511586 TOGARAM2Q6ZUX3 1019 aa7.47□□□□□ -1.21
PDLIM5-215ENST00000511586 IRF2BP2Q7Z5L9 587 aa7.47□□□□□ -1.21
PDLIM5-215ENST00000511586 ERICH1Q86X53 443 aa7.47□□□□□ -1.21
PDLIM5-215ENST00000511586 CCDC105Q8IYK2 499 aa7.47□□□□□ -1.21
PDLIM5-215ENST00000511586 ZNF397Q8NF99 534 aaPredicted RBP7.47□□□□□ -1.21
PDLIM5-215ENST00000511586 SLC20A1Q8WUM9 679 aa7.47□□□□□ -1.21
PDLIM5-215ENST00000511586 CPA5Q8WXQ8 436 aa7.47□□□□□ -1.21
PDLIM5-215ENST00000511586 BAP1Q92560 729 aa7.47□□□□□ -1.21
PDLIM5-215ENST00000511586 WBP2Q969T9 261 aa7.47□□□□□ -1.21
PDLIM5-215ENST00000511586 CLDN23Q96B33 292 aa7.47□□□□□ -1.21
PDLIM5-215ENST00000511586 PLD4Q96BZ4 506 aa7.47□□□□□ -1.21
PDLIM5-215ENST00000511586 C18orf8Q96DM3 657 aa7.47□□□□□ -1.21
PDLIM5-215ENST00000511586 IQCDQ96DY2 449 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms