RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 ARIH2O95376 493 aa8.06□□□□□ -1.12
USP53-206ENST00000510737 TYRP14679 529 aa8.06□□□□□ -1.12
USP53-206ENST00000510737 NPR1P16066 1061 aa8.06□□□□□ -1.12
USP53-206ENST00000510737 EXOSC9Q06265 439 aaKnown RBP8.06□□□□□ -1.12
USP53-206ENST00000510737 SLC39A6Q13433 755 aa8.06□□□□□ -1.12
USP53-206ENST00000510737 EIF4A2Q14240 407 aaKnown RBP8.06□□□□□ -1.12
USP53-206ENST00000510737 TEDDM1Q5T9Z0 273 aa8.06□□□□□ -1.12
USP53-206ENST00000510737 ICE2Q659A1 982 aa8.06□□□□□ -1.12
USP53-206ENST00000510737 NAPRTQ6XQN6 538 aa8.06□□□□□ -1.12
USP53-206ENST00000510737 CHSY1Q86X52 802 aa8.06□□□□□ -1.12
USP53-206ENST00000510737 CNBD1Q8NA66 436 aa8.06□□□□□ -1.12
USP53-206ENST00000510737 NELL2Q99435 816 aa8.06□□□□□ -1.12
USP53-206ENST00000510737 CACNA1SQ13698 1873 aa8.06□□□□□ -1.12
USP53-206ENST00000510737 QSOX1O00391 747 aa8.05□□□□□ -1.12
USP53-206ENST00000510737 TUBB4AP04350 444 aa8.05□□□□□ -1.12
USP53-206ENST00000510737 ENGP17813 658 aa8.05□□□□□ -1.12
USP53-206ENST00000510737 PCID2Q5JVF3 399 aa8.05□□□□□ -1.12
USP53-206ENST00000510737 FBXO46Q6PJ61 603 aaPredicted RBP8.05□□□□□ -1.12
USP53-206ENST00000510737 MIER2Q8N344 545 aa8.05□□□□□ -1.12
USP53-206ENST00000510737 CPA6Q8N4T0 437 aa8.05□□□□□ -1.12
USP53-206ENST00000510737 TESK2Q96S53 571 aa8.05□□□□□ -1.12
USP53-206ENST00000510737 PSMD1Q99460 953 aa8.05□□□□□ -1.12
USP53-206ENST00000510737 FEZ2Q9UHY8 353 aaPredicted RBP8.05□□□□□ -1.12
USP53-206ENST00000510737 HDAC9Q9UKV0 1011 aa8.05□□□□□ -1.12
USP53-206ENST00000510737 BRCA2P51587 3418 aa8.05□□□□□ -1.12
USP53-206ENST00000510737 CENPFP49454 3210 aa8.04□□□□□ -1.12
USP53-206ENST00000510737 SMIM35A0A1B0GVV1 85 aa8.04□□□□□ -1.12
USP53-206ENST00000510737 SLC16A6O15403 523 aa8.04□□□□□ -1.12
USP53-206ENST00000510737 FTLP02792 175 aaPredicted RBP8.04□□□□□ -1.12
USP53-206ENST00000510737 GNAI2P04899 355 aa8.04□□□□□ -1.12
USP53-206ENST00000510737 FESP07332 822 aa8.04□□□□□ -1.12
USP53-206ENST00000510737 HDCP19113 662 aa8.04□□□□□ -1.12
USP53-206ENST00000510737 AMOTQ4VCS5 1084 aa8.04□□□□□ -1.12
USP53-206ENST00000510737 SLC9A4Q6AI14 798 aa8.04□□□□□ -1.12
USP53-206ENST00000510737 CATSPERGQ6ZRH7 1159 aa8.04□□□□□ -1.12
USP53-206ENST00000510737 WDR53Q7Z5U6 358 aaPredicted RBP8.04□□□□□ -1.12
USP53-206ENST00000510737 ATG4AQ8WYN0 398 aa8.04□□□□□ -1.12
USP53-206ENST00000510737 LMBRD1Q9NUN5 540 aa8.04□□□□□ -1.12
USP53-206ENST00000510737 POLKQ9UBT6 870 aa8.04□□□□□ -1.12
USP53-206ENST00000510737 SNED1Q8TER0 1413 aa8.03□□□□□ -1.12
USP53-206ENST00000510737 NPHP1O15259 732 aa8.03□□□□□ -1.12
USP53-206ENST00000510737 TLR5O60602 858 aa8.03□□□□□ -1.12
USP53-206ENST00000510737 EN2P19622 333 aaPredicted RBP8.03□□□□□ -1.12
USP53-206ENST00000510737 LILRA4P59901 499 aa8.03□□□□□ -1.12
USP53-206ENST00000510737 USP45Q70EL2 814 aa8.03□□□□□ -1.12
USP53-206ENST00000510737 CYP2W1Q8TAV3 490 aa8.03□□□□□ -1.12
USP53-206ENST00000510737 SIN3AQ96ST3 1273 aa8.03□□□□□ -1.12
USP53-206ENST00000510737 FSD1LQ9BXM9 530 aa8.03□□□□□ -1.12
USP53-206ENST00000510737 ASPSCR1Q9BZE9 553 aa8.03□□□□□ -1.12
USP53-206ENST00000510737 PDGFCQ9NRA1 345 aa8.03□□□□□ -1.12
USP53-206ENST00000510737 HTTP42858 3142 aa8.03□□□□□ -1.12
USP53-206ENST00000510737 CAMTA2O94983 1202 aa8.02□□□□□ -1.13
USP53-206ENST00000510737 BMP15O95972 392 aa8.02□□□□□ -1.13
USP53-206ENST00000510737 ALDH1B1P30837 517 aa8.02□□□□□ -1.13
USP53-206ENST00000510737 GMPSP49915 693 aaPredicted RBP8.02□□□□□ -1.13
USP53-206ENST00000510737 CXCL9Q07325 125 aa8.02□□□□□ -1.13
USP53-206ENST00000510737 LONRF3Q496Y0 759 aa8.02□□□□□ -1.13
USP53-206ENST00000510737 C1orf141Q5JVX7 400 aa8.02□□□□□ -1.13
USP53-206ENST00000510737 THEMIS2Q5TEJ8 643 aa8.02□□□□□ -1.13
USP53-206ENST00000510737 ARHGAP40Q5TG30 622 aa8.02□□□□□ -1.13
USP53-206ENST00000510737 ZNF804AQ7Z570 1209 aa8.02□□□□□ -1.13
USP53-206ENST00000510737 CATIPQ7Z7H3 387 aa8.02□□□□□ -1.13
USP53-206ENST00000510737 CELF5Q8N6W0 485 aaKnown RBP8.02□□□□□ -1.13
USP53-206ENST00000510737 PCSK9Q8NBP7 692 aaKnown RBP8.02□□□□□ -1.13
USP53-206ENST00000510737 DENND1AQ8TEH3 1009 aa8.02□□□□□ -1.13
USP53-206ENST00000510737 GLG1Q92896 1179 aa8.02□□□□□ -1.13
USP53-206ENST00000510737 PRSS22Q9GZN4 317 aa8.02□□□□□ -1.13
USP53-206ENST00000510737 SH2B3Q9UQQ2 575 aa8.02□□□□□ -1.13
USP53-206ENST00000510737 RANBP2P49792 3224 aaKnown RBP8.02□□□□□ -1.13
USP53-206ENST00000510737 H0YGN5 161 aa8.01□□□□□ -1.13
USP53-206ENST00000510737 PPEF2O14830 753 aa8.01□□□□□ -1.13
USP53-206ENST00000510737 ERC2O15083 957 aa8.01□□□□□ -1.13
USP53-206ENST00000510737 SFRP4Q6FHJ7 346 aaPredicted RBP8.01□□□□□ -1.13
USP53-206ENST00000510737 PNLDC1Q8NA58 520 aaKnown RBP8.01□□□□□ -1.13
USP53-206ENST00000510737 C8orf58Q8NAV2 365 aa8.01□□□□□ -1.13
USP53-206ENST00000510737 RITA1Q96K30 269 aa8.01□□□□□ -1.13
USP53-206ENST00000510737 C5orf34Q96MH7 638 aa8.01□□□□□ -1.13
USP53-206ENST00000510737 SMAD5Q99717 465 aaKnown RBP8.01□□□□□ -1.13
USP53-206ENST00000510737 GBA2Q9HCG7 927 aaPredicted RBP8.01□□□□□ -1.13
USP53-206ENST00000510737 PNPOQ9NVS9 261 aa8.01□□□□□ -1.13
USP53-206ENST00000510737 ELOVL5Q9NYP7 299 aa8.01□□□□□ -1.13
USP53-206ENST00000510737 ADAMTS5Q9UNA0 930 aa8.01□□□□□ -1.13
USP53-206ENST00000510737 TBC1D30Q9Y2I9 924 aa8.01□□□□□ -1.13
USP53-206ENST00000510737 TRIOBPQ9H2D6 2365 aa8□□□□□ -1.13
USP53-206ENST00000510737 RBBP6Q7Z6E9 1792 aaKnown RBP8□□□□□ -1.13
USP53-206ENST00000510737 UNC80Q8N2C7 3258 aa8□□□□□ -1.13
USP53-206ENST00000510737 KCNU1A8MYU2 1149 aa8□□□□□ -1.13
USP53-206ENST00000510737 TRIM38O00635 465 aa8□□□□□ -1.13
USP53-206ENST00000510737 NTN1O95631 604 aa8□□□□□ -1.13
USP53-206ENST00000510737 STARD3NLO95772 234 aa8□□□□□ -1.13
USP53-206ENST00000510737 POU2F2P09086 479 aa8□□□□□ -1.13
USP53-206ENST00000510737 ARHGAP25P42331 645 aa8□□□□□ -1.13
USP53-206ENST00000510737 LOXL3P58215 753 aa8□□□□□ -1.13
USP53-206ENST00000510737 NKX6-1P78426 367 aaPredicted RBP8□□□□□ -1.13
USP53-206ENST00000510737 HOXA4Q00056 320 aaPredicted RBP8□□□□□ -1.13
USP53-206ENST00000510737 PLS1Q14651 629 aa8□□□□□ -1.13
USP53-206ENST00000510737 DAZAP2Q15038 168 aaPredicted RBP8□□□□□ -1.13
USP53-206ENST00000510737 TECPR1Q7Z6L1 1165 aa8□□□□□ -1.13
USP53-206ENST00000510737 NBPF5PQ86XG9 351 aaPredicted RBP8□□□□□ -1.13
USP53-206ENST00000510737 GALNT16Q8N428 558 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms