RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 FAM163BP0C2L3 166 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 COPS2P61201 443 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 POLR2LP62875 67 aaKnown RBP5.31□□□□□ -1.56
PHF3-210ENST00000509876 FASTKD1Q53R41 847 aaKnown RBP5.31□□□□□ -1.56
PHF3-210ENST00000509876 AARS2Q5JTZ9 985 aaKnown RBP5.31□□□□□ -1.56
PHF3-210ENST00000509876 TTC39BQ5VTQ0 682 aaPredicted RBP5.31□□□□□ -1.56
PHF3-210ENST00000509876 SDHAF4Q5VUM1 108 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 CCDC137Q6PK04 289 aaKnown RBP5.31□□□□□ -1.56
PHF3-210ENST00000509876 C1orf54Q8WWF1 131 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 MCRS1Q96EZ8 462 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 ALG13Q9NP73 1137 aaKnown RBP5.31□□□□□ -1.56
PHF3-210ENST00000509876 RAD18Q9NS91 495 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 CRLS1Q9UJA2 301 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 WNT7AO00755 349 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 ATP9BO43861 1147 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 CST8O60676 142 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 CHEK2O96017 543 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 MT-ND3P03897 115 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 STX2P32856 288 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 MAPK8P45983 427 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 MEI1Q5TIA1 1274 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 PIGZQ86VD9 579 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 RGL4Q8IZJ4 473 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 FUBP3Q96I24 572 aaKnown RBP eCLIP5.31□□□□□ -1.563e-11■■■□□ 16.3
PHF3-210ENST00000509876 OSBPL8Q9BZF1 889 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 ERVK-5Q9HDB9 667 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 OGDHLQ9ULD0 1010 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 PYCARDQ9ULZ3 195 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 CCDC151A5D8V7 595 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 STX7O15400 261 aaKnown RBP5.31□□□□□ -1.56
PHF3-210ENST00000509876 NDUFS3O75489 264 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 KRT37O76014 449 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 PROSCO94903 275 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 SLC11A1P49279 550 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 FXR1P51114 621 aaKnown RBP eCLIP5.31□□□□□ -1.567e-7■■■■□ 19.6
PHF3-210ENST00000509876 EPHB4P54760 987 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 LRRC32Q14392 662 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 RNF187Q5TA31 235 aaPredicted RBP5.31□□□□□ -1.56
PHF3-210ENST00000509876 SERPINA13PQ6UXR4 307 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 CPLX4Q7Z7G2 160 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 PLD4Q96BZ4 506 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 NSUN3Q9H649 340 aaKnown RBP5.31□□□□□ -1.56
PHF3-210ENST00000509876 SFXN1Q9H9B4 322 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 KIAA1522Q9P206 1035 aaPredicted RBP5.31□□□□□ -1.56
PHF3-210ENST00000509876 UBA2Q9UBT2 640 aaPredicted RBP5.31□□□□□ -1.56
PHF3-210ENST00000509876 MAFFQ9ULX9 164 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 ARAP2Q8WZ64 1704 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 GOLGA8QA0A0J9YX86 632 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 EXOC1LA0A1B0GW35 172 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 GOLGA8OA6NCC3 632 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 GOLGA8NF8WBI6 632 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 GRM6O15303 877 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 TGFB1I1O43294 461 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 KRT38O76015 456 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 GLI1P08151 1106 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 OR4Q2P0C623 313 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 C21orf59P57076 290 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 LILRA4P59901 499 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 MRPS5P82675 430 aaKnown RBP5.31□□□□□ -1.56
PHF3-210ENST00000509876 PFKPQ01813 784 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 C3orf20Q8ND61 904 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 MCUQ8NE86 351 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 ATRIPQ8WXE1 791 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 ING5Q8WYH8 240 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 NECTIN4Q96NY8 510 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 SRPK1Q96SB4 655 aaKnown RBP5.31□□□□□ -1.56
PHF3-210ENST00000509876 PCYT2Q99447 389 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 DNPEPQ9ULA0 475 aa5.31□□□□□ -1.56
PHF3-210ENST00000509876 A0A0A6YYK5 440 aaPredicted RBP5.3□□□□□ -1.56
PHF3-210ENST00000509876 OPLAHO14841 1288 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 PHF2O75151 1096 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 TRUB2O95900 331 aaKnown RBP5.3□□□□□ -1.56
PHF3-210ENST00000509876 KCNE1P15382 129 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 RRM1P23921 792 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 DENND1BQ6P3S1 775 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 GPR152Q8TDT2 470 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 TSPAN17Q96FV3 270 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 IGSF21Q96ID5 467 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 AGAP3Q96P47 875 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 FMO2Q99518 471 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 HERC2P3Q9BVR0 1158 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 PLAGL2Q9UPG8 496 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 A0A1W2PQH9 124 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 A6NNZ2 444 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 NEDD8-MDP1E9PL57 170 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 GOLGA8MH3BSY2 632 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 CLDN5O00501 218 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 CRTAMO95727 393 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 HIST1H2AGP0C0S8 130 aaPredicted RBP5.3□□□□□ -1.56
PHF3-210ENST00000509876 HIST1H2ADP20671 130 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 CYP2F1P24903 491 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 AIF1P55008 147 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 SNRPD1P62314 119 aaKnown RBP5.3□□□□□ -1.56
PHF3-210ENST00000509876 GAD2Q05329 585 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 TAF10Q12962 218 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 SLC35G1Q2M3R5 365 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 TUBB8Q3ZCM7 444 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 FAM183BPQ6ZVS7 135 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 ATAD1Q8NBU5 361 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 CXorf40AQ8TE69 158 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms