RNA–Protein interactions for RNA: ENST00000509346.5

GYPA-206, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 5

Gene GYPA, Length 383 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-206ENST00000509346 ZSCAN31Q96LW9 406 aaPredicted RBP3.18□□□□□ -1.9
GYPA-206ENST00000509346 PYM1Q9BRP8 204 aaKnown RBP3.18□□□□□ -1.9
GYPA-206ENST00000509346 MLXIPQ9HAP2 919 aa3.18□□□□□ -1.9
GYPA-206ENST00000509346 WASH6PQ9NQA3 447 aa3.18□□□□□ -1.9
GYPA-206ENST00000509346 TMOD4Q9NZQ9 345 aa3.18□□□□□ -1.9
GYPA-206ENST00000509346 KIF17Q9P2E2 1029 aa3.18□□□□□ -1.9
GYPA-206ENST00000509346 DNAJB11Q9UBS4 358 aa3.18□□□□□ -1.9
GYPA-206ENST00000509346 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.18□□□□□ -1.9
GYPA-206ENST00000509346 FEM1BQ9UK73 627 aa3.18□□□□□ -1.9
GYPA-206ENST00000509346 NDRG4Q9ULP0 352 aaKnown RBP3.18□□□□□ -1.9
GYPA-206ENST00000509346 NOX1Q9Y5S8 564 aa3.18□□□□□ -1.9
GYPA-206ENST00000509346 GXYLT2A0PJZ3 443 aa3.17□□□□□ -1.9
GYPA-206ENST00000509346 FAM90A18PA6NE21 464 aa3.17□□□□□ -1.9
GYPA-206ENST00000509346 FAM90A16PA6NEW6 464 aa3.17□□□□□ -1.9
GYPA-206ENST00000509346 FAM90A9PA6NNJ1 464 aa3.17□□□□□ -1.9
GYPA-206ENST00000509346 FAM90A5PA8MXJ8 464 aa3.17□□□□□ -1.9
GYPA-206ENST00000509346 B9A039 149 aa3.17□□□□□ -1.9
GYPA-206ENST00000509346 ADM5C9JUS6 153 aa3.17□□□□□ -1.9
GYPA-206ENST00000509346 J3KRW8 73 aa3.17□□□□□ -1.9
GYPA-206ENST00000509346 FCHO1O14526 889 aa3.17□□□□□ -1.9
GYPA-206ENST00000509346 TOR1BO14657 336 aa3.17□□□□□ -1.9
GYPA-206ENST00000509346 PROM1O43490 865 aa3.17□□□□□ -1.9
GYPA-206ENST00000509346 CCNT2O60583 730 aaKnown RBP3.17□□□□□ -1.9
GYPA-206ENST00000509346 VIPP01282 170 aa3.17□□□□□ -1.9
GYPA-206ENST00000509346 ERBB2P04626 1255 aa3.17□□□□□ -1.9
GYPA-206ENST00000509346 ANXA6P08133 673 aa3.17□□□□□ -1.9
GYPA-206ENST00000509346 FAM90A15PP0C7V4 464 aa3.17□□□□□ -1.9
GYPA-206ENST00000509346 FAM90A14PP0C7W9 464 aa3.17□□□□□ -1.9
GYPA-206ENST00000509346 CKMT1AP12532 417 aa3.17□□□□□ -1.9
GYPA-206ENST00000509346 WT1P19544 449 aaPredicted RBP3.17□□□□□ -1.9
GYPA-206ENST00000509346 HTR7P34969 479 aa3.17□□□□□ -1.9
GYPA-206ENST00000509346 NPTX2P47972 431 aa3.17□□□□□ -1.9
GYPA-206ENST00000509346 MCM2P49736 904 aa3.17□□□□□ -1.9
GYPA-206ENST00000509346 PDE6CP51160 858 aa3.17□□□□□ -1.9
GYPA-206ENST00000509346 RPS7P62081 194 aaKnown RBP3.17□□□□□ -1.9
GYPA-206ENST00000509346 TLE2Q04725 743 aa3.17□□□□□ -1.9
GYPA-206ENST00000509346 GPS1Q13098 491 aa3.17□□□□□ -1.9
GYPA-206ENST00000509346 FHL3Q13643 280 aa3.17□□□□□ -1.9
GYPA-206ENST00000509346 CCNIQ14094 377 aa3.17□□□□□ -1.9
GYPA-206ENST00000509346 TAF5Q15542 800 aa3.17□□□□□ -1.9
GYPA-206ENST00000509346 FAM110CQ1W6H9 321 aa3.17□□□□□ -1.9
GYPA-206ENST00000509346 ADCK5Q3MIX3 580 aa3.17□□□□□ -1.9
GYPA-206ENST00000509346 SP5Q6BEB4 398 aaPredicted RBP3.17□□□□□ -1.9
GYPA-206ENST00000509346 ZNF788Q6ZQV5 615 aa3.17□□□□□ -1.9
GYPA-206ENST00000509346 RAB11FIP2Q7L804 512 aa3.17□□□□□ -1.9
GYPA-206ENST00000509346 TMTC1Q8IUR5 882 aa3.17□□□□□ -1.9
GYPA-206ENST00000509346 RASGRP3Q8IV61 690 aa3.17□□□□□ -1.9
GYPA-206ENST00000509346 NRSN1Q8IZ57 195 aa3.17□□□□□ -1.9
GYPA-206ENST00000509346 ADGRG5Q8IZF4 528 aa3.17□□□□□ -1.9
GYPA-206ENST00000509346 SPARTQ8N0X7 666 aa3.17□□□□□ -1.9
GYPA-206ENST00000509346 CLASRPQ8N2M8 674 aaKnown RBP3.17□□□□□ -1.9
GYPA-206ENST00000509346 Q8N9P0 234 aaPredicted RBP3.17□□□□□ -1.9
GYPA-206ENST00000509346 C9orf106Q8NAJ2 232 aa3.17□□□□□ -1.9
GYPA-206ENST00000509346 NSUN7Q8NE18 718 aaKnown RBP3.17□□□□□ -1.9
GYPA-206ENST00000509346 DNAJB14Q8TBM8 379 aa3.17□□□□□ -1.9
GYPA-206ENST00000509346 PTCD3Q96EY7 689 aaKnown RBP3.17□□□□□ -1.9
GYPA-206ENST00000509346 UNC45AQ9H3U1 944 aa3.17□□□□□ -1.9
GYPA-206ENST00000509346 TRIM36Q9NQ86 728 aa3.17□□□□□ -1.9
GYPA-206ENST00000509346 G6PC2Q9NQR9 355 aa3.17□□□□□ -1.9
GYPA-206ENST00000509346 SLC17A6Q9P2U8 582 aa3.17□□□□□ -1.9
GYPA-206ENST00000509346 NFU1Q9UMS0 254 aa3.17□□□□□ -1.9
GYPA-206ENST00000509346 SSX2IPQ9Y2D8 614 aa3.17□□□□□ -1.9
GYPA-206ENST00000509346 ENTPD2Q9Y5L3 495 aa3.17□□□□□ -1.9
GYPA-206ENST00000509346 hCG_1984214I3L0E3 225 aa3.16□□□□□ -1.9
GYPA-206ENST00000509346 HOXC11O43248 304 aaPredicted RBP3.16□□□□□ -1.9
GYPA-206ENST00000509346 RASAL1O95294 804 aa3.16□□□□□ -1.9
GYPA-206ENST00000509346 PYGLP06737 847 aa3.16□□□□□ -1.9
GYPA-206ENST00000509346 FAM163BP0C2L3 166 aa3.16□□□□□ -1.9
GYPA-206ENST00000509346 RBL1P28749 1068 aa3.16□□□□□ -1.9
GYPA-206ENST00000509346 CD6P30203 668 aa3.16□□□□□ -1.9
GYPA-206ENST00000509346 UQCRC1P31930 480 aa3.16□□□□□ -1.9
GYPA-206ENST00000509346 RXRGP48443 463 aa3.16□□□□□ -1.9
GYPA-206ENST00000509346 PAPOLAP51003 745 aaKnown RBP3.16□□□□□ -1.9
GYPA-206ENST00000509346 VAMP2P63027 116 aa3.16□□□□□ -1.9
GYPA-206ENST00000509346 DDX10Q13206 875 aaKnown RBP3.16□□□□□ -1.9
GYPA-206ENST00000509346 E2F2Q14209 437 aa3.16□□□□□ -1.9
GYPA-206ENST00000509346 TAF12Q16514 161 aa3.16□□□□□ -1.9
GYPA-206ENST00000509346 TIGD6Q17RP2 521 aa3.16□□□□□ -1.9
GYPA-206ENST00000509346 PTCHD3Q3KNS1 767 aa3.16□□□□□ -1.9
GYPA-206ENST00000509346 HYIQ5T013 277 aa3.16□□□□□ -1.9
GYPA-206ENST00000509346 RBM20Q5T481 1227 aaKnown RBP3.16□□□□□ -1.9
GYPA-206ENST00000509346 ARHGAP40Q5TG30 622 aa3.16□□□□□ -1.9
GYPA-206ENST00000509346 ICE2Q659A1 982 aa3.16□□□□□ -1.9
GYPA-206ENST00000509346 RGS7BPQ6MZT1 257 aaPredicted RBP3.16□□□□□ -1.9
GYPA-206ENST00000509346 NFRKBQ6P4R8 1299 aa3.16□□□□□ -1.9
GYPA-206ENST00000509346 VWA1Q6PCB0 445 aa3.16□□□□□ -1.9
GYPA-206ENST00000509346 FOXR2Q6PJQ5 311 aa3.16□□□□□ -1.9
GYPA-206ENST00000509346 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.16□□□□□ -1.9
GYPA-206ENST00000509346 SLC30A10Q6XR72 485 aa3.16□□□□□ -1.9
GYPA-206ENST00000509346 RINLQ6ZS11 566 aa3.16□□□□□ -1.9
GYPA-206ENST00000509346 ANKS1BQ7Z6G8 1248 aa3.16□□□□□ -1.9
GYPA-206ENST00000509346 CPOQ8IVL8 374 aa3.16□□□□□ -1.9
GYPA-206ENST00000509346 SLC15A3Q8IY34 581 aa3.16□□□□□ -1.9
GYPA-206ENST00000509346 FTSJ3Q8IY81 847 aaKnown RBP3.16□□□□□ -1.9
GYPA-206ENST00000509346 PPHLN1Q8NEY8 458 aaKnown RBP3.16□□□□□ -1.9
GYPA-206ENST00000509346 OR6Y1Q8NGX8 325 aa3.16□□□□□ -1.9
GYPA-206ENST00000509346 SCAMP5Q8TAC9 235 aa3.16□□□□□ -1.9
GYPA-206ENST00000509346 ABHD5Q8WTS1 349 aa3.16□□□□□ -1.9
GYPA-206ENST00000509346 ASB12Q8WXK4 309 aa3.16□□□□□ -1.9
GYPA-206ENST00000509346 SNX19Q92543 992 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms