RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 BTBD8Q5XKL5 378 aa11.1□□□□□ -0.63
POLR2J3-213ENST00000508848 CWF19L1Q69YN2 538 aaKnown RBP11.1□□□□□ -0.63
POLR2J3-213ENST00000508848 PPP1R2P3Q6NXS1 205 aa11.1□□□□□ -0.63
POLR2J3-213ENST00000508848 DENND1BQ6P3S1 775 aa11.1□□□□□ -0.63
POLR2J3-213ENST00000508848 Q6ZNB5 142 aa11.1□□□□□ -0.63
POLR2J3-213ENST00000508848 SCUBE3Q8IX30 993 aa11.1□□□□□ -0.63
POLR2J3-213ENST00000508848 FAM217AQ8IXS0 508 aa11.1□□□□□ -0.63
POLR2J3-213ENST00000508848 ZNF397Q8NF99 534 aaPredicted RBP11.1□□□□□ -0.63
POLR2J3-213ENST00000508848 RIN3Q8TB24 985 aa11.1□□□□□ -0.63
POLR2J3-213ENST00000508848 EPS8L1Q8TE68 723 aa11.1□□□□□ -0.63
POLR2J3-213ENST00000508848 FAM3CQ92520 227 aa11.1□□□□□ -0.63
POLR2J3-213ENST00000508848 PPP1R13BQ96KQ4 1090 aa11.1□□□□□ -0.63
POLR2J3-213ENST00000508848 SPAG5Q96R06 1193 aa11.1□□□□□ -0.63
POLR2J3-213ENST00000508848 SMG9Q9H0W8 520 aaKnown RBP11.1□□□□□ -0.63
POLR2J3-213ENST00000508848 NUCKS1Q9H1E3 243 aaKnown RBP11.1□□□□□ -0.63
POLR2J3-213ENST00000508848 HEBP1Q9NRV9 189 aa11.1□□□□□ -0.63
POLR2J3-213ENST00000508848 FAM207AQ9NSI2 230 aaPredicted RBP11.1□□□□□ -0.63
POLR2J3-213ENST00000508848 RRN3Q9NYV6 651 aa11.1□□□□□ -0.63
POLR2J3-213ENST00000508848 AIPL1Q9NZN9 384 aa11.1□□□□□ -0.63
POLR2J3-213ENST00000508848 MARK1Q9P0L2 795 aa11.1□□□□□ -0.63
POLR2J3-213ENST00000508848 MARCH2Q9P0N8 246 aa11.1□□□□□ -0.63
POLR2J3-213ENST00000508848 NOCTQ9UK39 431 aaKnown RBP11.1□□□□□ -0.63
POLR2J3-213ENST00000508848 LSM7Q9UK45 103 aaKnown RBP11.1□□□□□ -0.63
POLR2J3-213ENST00000508848 CA14Q9ULX7 337 aa11.1□□□□□ -0.63
POLR2J3-213ENST00000508848 PIAS3Q9Y6X2 628 aa11.1□□□□□ -0.63
POLR2J3-213ENST00000508848 FANCMQ8IYD8 2048 aa11.09□□□□□ -0.63
POLR2J3-213ENST00000508848 FAM170BA6NMN3 283 aa11.09□□□□□ -0.63
POLR2J3-213ENST00000508848 HOXC11O43248 304 aaPredicted RBP11.09□□□□□ -0.63
POLR2J3-213ENST00000508848 STC2O76061 302 aa11.09□□□□□ -0.63
POLR2J3-213ENST00000508848 TBX18O95935 607 aa11.09□□□□□ -0.63
POLR2J3-213ENST00000508848 SERPINC1P01008 464 aa11.09□□□□□ -0.63
POLR2J3-213ENST00000508848 IGLV3-27P01718 113 aa11.09□□□□□ -0.63
POLR2J3-213ENST00000508848 CHRNB1P11230 501 aa11.09□□□□□ -0.63
POLR2J3-213ENST00000508848 DRD1P21728 446 aa11.09□□□□□ -0.63
POLR2J3-213ENST00000508848 CHKAP35790 457 aa11.09□□□□□ -0.63
POLR2J3-213ENST00000508848 PBX1P40424 430 aa11.09□□□□□ -0.63
POLR2J3-213ENST00000508848 YWHAZP63104 245 aaKnown RBP11.09□□□□□ -0.63
POLR2J3-213ENST00000508848 FANCCQ00597 558 aa11.09□□□□□ -0.63
POLR2J3-213ENST00000508848 CDR2Q01850 454 aa11.09□□□□□ -0.63
POLR2J3-213ENST00000508848 IFRD2Q12894 506 aaPredicted RBP11.09□□□□□ -0.63
POLR2J3-213ENST00000508848 PDCLQ13371 301 aa11.09□□□□□ -0.63
POLR2J3-213ENST00000508848 EIF4EBP2Q13542 120 aaPredicted RBP11.09□□□□□ -0.63
POLR2J3-213ENST00000508848 TMEM196Q5HYL7 178 aa11.09□□□□□ -0.63
POLR2J3-213ENST00000508848 TPRG1Q6ZUI0 275 aa11.09□□□□□ -0.63
POLR2J3-213ENST00000508848 LUZP1Q86V48 1076 aa11.09□□□□□ -0.63
POLR2J3-213ENST00000508848 UNC45BQ8IWX7 931 aa11.09□□□□□ -0.63
POLR2J3-213ENST00000508848 CCDC105Q8IYK2 499 aa11.09□□□□□ -0.63
POLR2J3-213ENST00000508848 CPXM2Q8N436 756 aa11.09□□□□□ -0.63
POLR2J3-213ENST00000508848 MSANTD4Q8NCY6 345 aa11.09□□□□□ -0.63
POLR2J3-213ENST00000508848 KCNV2Q8TDN2 545 aa11.09□□□□□ -0.63
POLR2J3-213ENST00000508848 RNF139Q8WU17 664 aa11.09□□□□□ -0.63
POLR2J3-213ENST00000508848 SYN2Q92777 582 aaPredicted RBP11.09□□□□□ -0.63
POLR2J3-213ENST00000508848 GOLGA1Q92805 767 aa11.09□□□□□ -0.63
POLR2J3-213ENST00000508848 PLD4Q96BZ4 506 aa11.09□□□□□ -0.63
POLR2J3-213ENST00000508848 NAP1L5Q96NT1 182 aaPredicted RBP11.09□□□□□ -0.63
POLR2J3-213ENST00000508848 NACA2Q9H009 215 aa11.09□□□□□ -0.63
POLR2J3-213ENST00000508848 LINC00597Q9H2U6 94 aa11.09□□□□□ -0.63
POLR2J3-213ENST00000508848 POPDC2Q9HBU9 364 aa11.09□□□□□ -0.63
POLR2J3-213ENST00000508848 GTSE1Q9NYZ3 720 aa11.09□□□□□ -0.63
POLR2J3-213ENST00000508848 CFAP97Q9P2B7 532 aa11.09□□□□□ -0.63
POLR2J3-213ENST00000508848 WDR35Q9P2L0 1181 aa11.09□□□□□ -0.63
POLR2J3-213ENST00000508848 SH3BP1Q9Y3L3 701 aa11.09□□□□□ -0.63
POLR2J3-213ENST00000508848 A0A1W2PQJ5 194 aa11.08□□□□□ -0.64
POLR2J3-213ENST00000508848 FAM86C2PA6NEL3 165 aa11.08□□□□□ -0.64
POLR2J3-213ENST00000508848 OTOL1A6NHN0 477 aaPredicted RBP11.08□□□□□ -0.64
POLR2J3-213ENST00000508848 EPHB6O15197 1021 aa11.08□□□□□ -0.64
POLR2J3-213ENST00000508848 TEX33O43247 280 aa11.08□□□□□ -0.64
POLR2J3-213ENST00000508848 PAPSS1O43252 624 aaPredicted RBP11.08□□□□□ -0.64
POLR2J3-213ENST00000508848 GALR2O43603 387 aaPredicted RBP11.08□□□□□ -0.64
POLR2J3-213ENST00000508848 PAPSS2O95340 614 aaPredicted RBP11.08□□□□□ -0.64
POLR2J3-213ENST00000508848 ADH1CP00326 375 aa11.08□□□□□ -0.64
POLR2J3-213ENST00000508848 PDGFBP01127 241 aaPredicted RBP11.08□□□□□ -0.64
POLR2J3-213ENST00000508848 CYP1A1P04798 512 aaPredicted RBP11.08□□□□□ -0.64
POLR2J3-213ENST00000508848 FYNP06241 537 aa11.08□□□□□ -0.64
POLR2J3-213ENST00000508848 TPM3P06753 285 aa11.08□□□□□ -0.64
POLR2J3-213ENST00000508848 FERP16591 822 aa11.08□□□□□ -0.64
POLR2J3-213ENST00000508848 HOXA6P31267 233 aa11.08□□□□□ -0.64
POLR2J3-213ENST00000508848 GJA4P35212 333 aa11.08□□□□□ -0.64
POLR2J3-213ENST00000508848 PRKCIP41743 596 aa11.08□□□□□ -0.64
POLR2J3-213ENST00000508848 GSCP56915 257 aaPredicted RBP11.08□□□□□ -0.64
POLR2J3-213ENST00000508848 UBASH3AP57075 661 aa11.08□□□□□ -0.64
POLR2J3-213ENST00000508848 CCINQ13939 588 aa11.08□□□□□ -0.64
POLR2J3-213ENST00000508848 LRRC32Q14392 662 aa11.08□□□□□ -0.64
POLR2J3-213ENST00000508848 E2F5Q15329 346 aa11.08□□□□□ -0.64
POLR2J3-213ENST00000508848 DHCR24Q15392 516 aa11.08□□□□□ -0.64
POLR2J3-213ENST00000508848 MPP7Q5T2T1 576 aa11.08□□□□□ -0.64
POLR2J3-213ENST00000508848 ACBD5Q5T8D3 534 aaPredicted RBP11.08□□□□□ -0.64
POLR2J3-213ENST00000508848 IER5LQ5T953 404 aa11.08□□□□□ -0.64
POLR2J3-213ENST00000508848 RHBDF2Q6PJF5 856 aa11.08□□□□□ -0.64
POLR2J3-213ENST00000508848 RSRC2Q7L4I2 434 aaKnown RBP11.08□□□□□ -0.64
POLR2J3-213ENST00000508848 SLC26A9Q7LBE3 791 aa11.08□□□□□ -0.64
POLR2J3-213ENST00000508848 IRF2BP2Q7Z5L9 587 aa11.08□□□□□ -0.64
POLR2J3-213ENST00000508848 TMEM105Q8N8V8 129 aa11.08□□□□□ -0.64
POLR2J3-213ENST00000508848 FLCNQ8NFG4 579 aa11.08□□□□□ -0.64
POLR2J3-213ENST00000508848 C18orf8Q96DM3 657 aa11.08□□□□□ -0.64
POLR2J3-213ENST00000508848 VCPIP1Q96JH7 1222 aa11.08□□□□□ -0.64
POLR2J3-213ENST00000508848 ZFYVE19Q96K21 471 aa11.08□□□□□ -0.64
POLR2J3-213ENST00000508848 CPXM1Q96SM3 734 aa11.08□□□□□ -0.64
POLR2J3-213ENST00000508848 TTYH3Q9C0H2 523 aa11.08□□□□□ -0.64
POLR2J3-213ENST00000508848 CHRDQ9H2X0 955 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms