RNA–Protein interactions for RNA: ENST00000508618.5

GYPB-209, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 2

Gene GYPB, Length 388 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-209ENST00000508618 SPSB4Q96A44 273 aa3.7□□□□□ -1.82
GYPB-209ENST00000508618 MSI2Q96DH6 328 aaKnown RBP3.7□□□□□ -1.82
GYPB-209ENST00000508618 MED30Q96HR3 178 aa3.7□□□□□ -1.82
GYPB-209ENST00000508618 ZCWPW1Q9H0M4 648 aa3.7□□□□□ -1.82
GYPB-209ENST00000508618 MYLK2Q9H1R3 596 aa3.7□□□□□ -1.82
GYPB-209ENST00000508618 A1CFQ9NQ94 594 aaKnown RBP3.7□□□□□ -1.82
GYPB-209ENST00000508618 WNT16Q9UBV4 365 aa3.7□□□□□ -1.82
GYPB-209ENST00000508618 NKX1-2Q9UD57 310 aaPredicted RBP3.7□□□□□ -1.82
GYPB-209ENST00000508618 H3BML4 177 aa3.69□□□□□ -1.82
GYPB-209ENST00000508618 RRP9O43818 475 aaKnown RBP3.69□□□□□ -1.82
GYPB-209ENST00000508618 ATG13O75143 517 aa3.69□□□□□ -1.82
GYPB-209ENST00000508618 GAS8-AS1O95177 125 aa3.69□□□□□ -1.82
GYPB-209ENST00000508618 PGDP52209 483 aa3.69□□□□□ -1.82
GYPB-209ENST00000508618 JAK3P52333 1124 aa3.69□□□□□ -1.82
GYPB-209ENST00000508618 DEUP1Q05D60 604 aa3.69□□□□□ -1.82
GYPB-209ENST00000508618 LTBQ06643 244 aa3.69□□□□□ -1.82
GYPB-209ENST00000508618 CACHD1Q5VU97 1274 aa3.69□□□□□ -1.82
GYPB-209ENST00000508618 RBM44Q6ZP01 1051 aaKnown RBP3.69□□□□□ -1.82
GYPB-209ENST00000508618 DENND1CQ8IV53 801 aa3.69□□□□□ -1.82
GYPB-209ENST00000508618 MPP5Q8N3R9 675 aa3.69□□□□□ -1.82
GYPB-209ENST00000508618 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.69□□□□□ -1.82
GYPB-209ENST00000508618 SCNM1Q9BWG6 230 aa3.69□□□□□ -1.82
GYPB-209ENST00000508618 RNF26Q9BY78 433 aaPredicted RBP3.69□□□□□ -1.82
GYPB-209ENST00000508618 RBM38Q9H0Z9 239 aaKnown RBP3.69□□□□□ -1.82
GYPB-209ENST00000508618 SLC12A5Q9H2X9 1139 aa3.69□□□□□ -1.82
GYPB-209ENST00000508618 AGO4Q9HCK5 861 aaKnown RBP3.69□□□□□ -1.82
GYPB-209ENST00000508618 MLXIPLQ9NP71 852 aa3.69□□□□□ -1.82
GYPB-209ENST00000508618 FZD3Q9NPG1 666 aa3.69□□□□□ -1.82
GYPB-209ENST00000508618 ARL8BQ9NVJ2 186 aa3.69□□□□□ -1.82
GYPB-209ENST00000508618 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.69□□□□□ -1.82
GYPB-209ENST00000508618 STEAP1Q9UHE8 339 aa3.69□□□□□ -1.82
GYPB-209ENST00000508618 WASHC2CQ9Y4E1 1318 aa3.69□□□□□ -1.82
GYPB-209ENST00000508618 A0A1W2PPL8 197 aa3.68□□□□□ -1.82
GYPB-209ENST00000508618 SLC22A23A1A5C7 686 aa3.68□□□□□ -1.82
GYPB-209ENST00000508618 NTN3O00634 580 aaPredicted RBP3.68□□□□□ -1.82
GYPB-209ENST00000508618 ZC3H11AO75152 810 aaKnown RBP eCLIP3.68□□□□□ -1.82
GYPB-209ENST00000508618 RASAL1O95294 804 aa3.68□□□□□ -1.82
GYPB-209ENST00000508618 PARP1P09874 1014 aaKnown RBP3.68□□□□□ -1.82
GYPB-209ENST00000508618 TFEBP19484 476 aa3.68□□□□□ -1.82
GYPB-209ENST00000508618 KLRC1P26715 233 aa3.68□□□□□ -1.82
GYPB-209ENST00000508618 KCNJ4P48050 445 aa3.68□□□□□ -1.82
GYPB-209ENST00000508618 GATMP50440 423 aa3.68□□□□□ -1.82
GYPB-209ENST00000508618 RPL36AP83881 106 aaKnown RBP3.68□□□□□ -1.82
GYPB-209ENST00000508618 PPATQ06203 517 aa3.68□□□□□ -1.82
GYPB-209ENST00000508618 PTGR1Q14914 329 aa3.68□□□□□ -1.82
GYPB-209ENST00000508618 ELP5Q8TE02 316 aa3.68□□□□□ -1.82
GYPB-209ENST00000508618 DIS3LQ8TF46 1054 aaKnown RBP3.68□□□□□ -1.82
GYPB-209ENST00000508618 MAML1Q92585 1016 aa3.68□□□□□ -1.82
GYPB-209ENST00000508618 CHMP4CQ96CF2 233 aa3.68□□□□□ -1.82
GYPB-209ENST00000508618 VPS50Q96JG6 964 aa3.68□□□□□ -1.82
GYPB-209ENST00000508618 SMAD5Q99717 465 aaKnown RBP3.68□□□□□ -1.82
GYPB-209ENST00000508618 CINPQ9BW66 212 aaPredicted RBP3.68□□□□□ -1.82
GYPB-209ENST00000508618 STAP2Q9UGK3 403 aa3.68□□□□□ -1.82
GYPB-209ENST00000508618 COG5Q9UP83 839 aa3.68□□□□□ -1.82
GYPB-209ENST00000508618 SIRT4Q9Y6E7 314 aaPredicted RBP3.68□□□□□ -1.82
GYPB-209ENST00000508618 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.67□□□□□ -1.82
GYPB-209ENST00000508618 TMEM233B4DJY2 109 aa3.67□□□□□ -1.82
GYPB-209ENST00000508618 TNFRSF13BO14836 293 aaPredicted RBP3.67□□□□□ -1.82
GYPB-209ENST00000508618 PRPF4O43172 522 aaKnown RBP eCLIP3.67□□□□□ -1.82
GYPB-209ENST00000508618 RGS10O43665 173 aa3.67□□□□□ -1.82
GYPB-209ENST00000508618 TBC1D4O60343 1298 aa3.67□□□□□ -1.82
GYPB-209ENST00000508618 PRAMEF2O60811 474 aa3.67□□□□□ -1.82
GYPB-209ENST00000508618 OFD1O75665 1012 aa3.67□□□□□ -1.82
GYPB-209ENST00000508618 HTR1BP28222 390 aa3.67□□□□□ -1.82
GYPB-209ENST00000508618 WDR5P61964 334 aaKnown RBP3.67□□□□□ -1.82
GYPB-209ENST00000508618 CCDC15Q0P6D6 951 aa3.67□□□□□ -1.82
GYPB-209ENST00000508618 FAM50AQ14320 339 aaKnown RBP3.67□□□□□ -1.82
GYPB-209ENST00000508618 RNF187Q5TA31 235 aaPredicted RBP3.67□□□□□ -1.82
GYPB-209ENST00000508618 USP49Q70CQ1 688 aa3.67□□□□□ -1.82
GYPB-209ENST00000508618 TFAP2DQ7Z6R9 452 aa3.67□□□□□ -1.82
GYPB-209ENST00000508618 DAAM2Q86T65 1068 aa3.67□□□□□ -1.82
GYPB-209ENST00000508618 MICU3Q86XE3 530 aa3.67□□□□□ -1.82
GYPB-209ENST00000508618 GRAMD1CQ8IYS0 662 aa3.67□□□□□ -1.82
GYPB-209ENST00000508618 TMEM199Q8N511 208 aa3.67□□□□□ -1.82
GYPB-209ENST00000508618 METTL25Q8N6Q8 603 aa3.67□□□□□ -1.82
GYPB-209ENST00000508618 OR56A3Q8NH54 315 aa3.67□□□□□ -1.82
GYPB-209ENST00000508618 TMEM255BQ8WV15 326 aa3.67□□□□□ -1.82
GYPB-209ENST00000508618 NUDCD2Q8WVJ2 157 aa3.67□□□□□ -1.82
GYPB-209ENST00000508618 PIGKQ92643 395 aa3.67□□□□□ -1.82
GYPB-209ENST00000508618 SF3B5Q9BWJ5 86 aaKnown RBP3.67□□□□□ -1.82
GYPB-209ENST00000508618 GATA5Q9BWX5 397 aaPredicted RBP3.67□□□□□ -1.82
GYPB-209ENST00000508618 FAM83DQ9H4H8 585 aa3.67□□□□□ -1.82
GYPB-209ENST00000508618 USP29Q9HBJ7 922 aa3.67□□□□□ -1.82
GYPB-209ENST00000508618 GABBR1Q9UBS5 961 aa3.67□□□□□ -1.82
GYPB-209ENST00000508618 ASAP1Q9ULH1 1129 aa3.67□□□□□ -1.82
GYPB-209ENST00000508618 LUC7L2Q9Y383 392 aaKnown RBP3.67□□□□□ -1.82
GYPB-209ENST00000508618 A0A087WYN8 130 aa3.66□□□□□ -1.82
GYPB-209ENST00000508618 AGPSO00116 658 aa3.66□□□□□ -1.82
GYPB-209ENST00000508618 PHGDHO43175 533 aaKnown RBP3.66□□□□□ -1.82
GYPB-209ENST00000508618 AP1G1O43747 822 aa3.66□□□□□ -1.82
GYPB-209ENST00000508618 MBPP02686 304 aaPredicted RBP3.66□□□□□ -1.82
GYPB-209ENST00000508618 HGFP14210 728 aa3.66□□□□□ -1.82
GYPB-209ENST00000508618 PTDSS1P48651 473 aaKnown RBP3.66□□□□□ -1.82
GYPB-209ENST00000508618 ENTPD1P49961 510 aa3.66□□□□□ -1.82
GYPB-209ENST00000508618 EIF4A1P60842 406 aaKnown RBP3.66□□□□□ -1.82
GYPB-209ENST00000508618 NFATC4Q14934 902 aa3.66□□□□□ -1.82
GYPB-209ENST00000508618 ZDHHC24Q6UX98 284 aa3.66□□□□□ -1.82
GYPB-209ENST00000508618 SRGAP1Q7Z6B7 1085 aa3.66□□□□□ -1.82
GYPB-209ENST00000508618 NR2C2APQ86WQ0 139 aa3.66□□□□□ -1.82
GYPB-209ENST00000508618 FAM71DQ8N9W8 422 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms