RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 FAM84AQ96KN4 292 aa7.84□□□□□ -1.15
PDGFRA-206ENST00000508170 TRERF1Q96PN7 1200 aa7.84□□□□□ -1.15
PDGFRA-206ENST00000508170 LMBRD1Q9NUN5 540 aa7.84□□□□□ -1.15
PDGFRA-206ENST00000508170 SLC8A2Q9UPR5 921 aa7.84□□□□□ -1.15
PDGFRA-206ENST00000508170 COMMD3-BMI1R4GMX3 469 aa7.84□□□□□ -1.15
PDGFRA-206ENST00000508170 DENND4BO75064 1496 aaPredicted RBP7.84□□□□□ -1.15
PDGFRA-206ENST00000508170 RAD50Q92878 1312 aa7.84□□□□□ -1.15
PDGFRA-206ENST00000508170 SLC9B1P1A6NJY1 282 aa7.84□□□□□ -1.15
PDGFRA-206ENST00000508170 GOLGA8SH3BPF8 625 aa7.84□□□□□ -1.15
PDGFRA-206ENST00000508170 DVL2O14641 736 aa7.84□□□□□ -1.15
PDGFRA-206ENST00000508170 TACC1O75410 805 aa7.84□□□□□ -1.15
PDGFRA-206ENST00000508170 FTLP02792 175 aaPredicted RBP7.84□□□□□ -1.15
PDGFRA-206ENST00000508170 ALPPP05187 535 aa7.84□□□□□ -1.15
PDGFRA-206ENST00000508170 ALPPL2P10696 532 aa7.84□□□□□ -1.15
PDGFRA-206ENST00000508170 NFKBIAP25963 317 aa7.84□□□□□ -1.15
PDGFRA-206ENST00000508170 PMS2P54278 862 aa7.84□□□□□ -1.15
PDGFRA-206ENST00000508170 B2MP61769 119 aa7.84□□□□□ -1.15
PDGFRA-206ENST00000508170 PPIDQ08752 370 aaKnown RBP7.84□□□□□ -1.15
PDGFRA-206ENST00000508170 IL24Q13007 206 aa7.84□□□□□ -1.15
PDGFRA-206ENST00000508170 GPS1Q13098 491 aa7.84□□□□□ -1.15
PDGFRA-206ENST00000508170 GPM6BQ13491 265 aa7.84□□□□□ -1.15
PDGFRA-206ENST00000508170 PTK6Q13882 451 aa7.84□□□□□ -1.15
PDGFRA-206ENST00000508170 FAM98CQ17RN3 349 aaKnown RBP7.84□□□□□ -1.15
PDGFRA-206ENST00000508170 FSCBQ5H9T9 825 aa7.84□□□□□ -1.15
PDGFRA-206ENST00000508170 WIPI1Q5MNZ9 446 aaPredicted RBP7.84□□□□□ -1.15
PDGFRA-206ENST00000508170 CYP4F22Q6NT55 531 aa7.84□□□□□ -1.15
PDGFRA-206ENST00000508170 USP49Q70CQ1 688 aa7.84□□□□□ -1.15
PDGFRA-206ENST00000508170 CISD2Q8N5K1 135 aaKnown RBP7.84□□□□□ -1.15
PDGFRA-206ENST00000508170 POU5F2Q8N7G0 328 aa7.84□□□□□ -1.15
PDGFRA-206ENST00000508170 PCDH19Q8TAB3 1148 aa7.84□□□□□ -1.15
PDGFRA-206ENST00000508170 METTL6Q8TCB7 284 aa7.84□□□□□ -1.15
PDGFRA-206ENST00000508170 DCAF4Q8WV16 495 aa7.84□□□□□ -1.15
PDGFRA-206ENST00000508170 MRPS27Q92552 414 aaKnown RBP7.84□□□□□ -1.15
PDGFRA-206ENST00000508170 EFHD2Q96C19 240 aaPredicted RBP7.84□□□□□ -1.15
PDGFRA-206ENST00000508170 THOC1Q96FV9 657 aaKnown RBP7.84□□□□□ -1.15
PDGFRA-206ENST00000508170 SLC5A7Q9GZV3 580 aa7.84□□□□□ -1.15
PDGFRA-206ENST00000508170 MVB12BQ9H7P6 319 aa7.84□□□□□ -1.15
PDGFRA-206ENST00000508170 RRP7BPQ9NSQ0 103 aa7.84□□□□□ -1.15
PDGFRA-206ENST00000508170 CASC3O15234 703 aaKnown RBP7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 SNRPB2P08579 225 aaKnown RBP7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 MCM7P33993 719 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 PTGS2P35354 604 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 KCNJ4P48050 445 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 HSD17B4P51659 736 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 EIF3EP60228 445 aaKnown RBP7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 ASIC1P78348 528 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 CDK17Q00537 523 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 LIPEQ05469 1076 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 TBC1D8BQ0IIM8 1120 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 ADAM9Q13443 819 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 KCNC3Q14003 757 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 GNA13Q14344 377 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 VEPH1Q14D04 833 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 FSCN1Q16658 493 aaKnown RBP7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 RNFT1Q5M7Z0 435 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 FAM173BQ6P4H8 233 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 OSTM1Q86WC4 334 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 FAM133AQ8N9E0 248 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 GLIS1Q8NBF1 620 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 SCAMP5Q8TAC9 235 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 IQCDQ96DY2 449 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 ELF4Q99607 663 aaPredicted RBP7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 PTPN18Q99952 460 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 GDF15Q99988 308 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 COQ10BQ9H8M1 238 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 BAIAP2L1Q9UHR4 511 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 CNOT11Q9UKZ1 510 aaKnown RBP7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 LHX6Q9UPM6 363 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 CDK13Q14004 1512 aaKnown RBP7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 KIAA0556O60303 1618 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 SOWAHBA6NEL2 793 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 ISM1B1AKI9 464 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 FCHO1O14526 889 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 PSMD10O75832 226 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 KRT37O76014 449 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 ADH1CP00326 375 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 ANXA8P13928 327 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 CHRM3P20309 590 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 ENDOUP21128 410 aaKnown RBP7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 CCT6AP40227 531 aaKnown RBP7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 HARS2P49590 506 aaKnown RBP7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 SUMO3P55854 103 aaPredicted RBP7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 ERVFC1P60507 584 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 GSTO1P78417 241 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 ABATP80404 500 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 CCDC142Q17RM4 750 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 FBXO43Q4G163 708 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 PAN2Q504Q3 1202 aaKnown RBP7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 FAM69AQ5T7M9 428 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 ANXA8L1Q5VT79 327 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 C8orf74Q6P047 294 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 CCDC62Q6P9F0 684 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 DSG4Q86SJ6 1040 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 FRMD1Q8N878 549 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 BAHD1Q8TBE0 780 aaPredicted RBP7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 SCFD2Q8WU76 684 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 THRSPQ92748 146 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 PEX13Q92968 403 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 APOPT1Q96IL0 206 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 LBHD1Q9BQE6 289 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms