RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 ITGB1BP2Q9UKP3 347 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 FAM184BQ9ULE4 1060 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 EXOC7Q9UPT5 735 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 CTNND2Q9UQB3 1225 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 TRAF3IP3Q9Y228 551 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 FRMPD3Q5JV73 1810 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 CDC14CA4D256 554 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 KIAA0391O15091 583 aaKnown RBP7.54□□□□□ -1.2
CLCN3-206ENST00000507875 ASAP2O43150 1006 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 SGTAO43765 313 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 PEX10O60683 326 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 HRGP04196 525 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 RPLP2P05387 115 aaKnown RBP7.54□□□□□ -1.2
CLCN3-206ENST00000507875 AKAP5P24588 427 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 RPL13P26373 211 aaKnown RBP7.54□□□□□ -1.2
CLCN3-206ENST00000507875 HTR1BP28222 390 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 TCF7P36402 384 aaPredicted RBP7.54□□□□□ -1.2
CLCN3-206ENST00000507875 MTNR1BP49286 362 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 ARL4DP49703 201 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 CASP5P51878 434 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 CDC42EP1Q00587 391 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 STK4Q13043 487 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 TARBP2Q15633 366 aaKnown RBP7.54□□□□□ -1.2
CLCN3-206ENST00000507875 TTI2Q6NXR4 508 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 TMEM139Q8IV31 216 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 CCDC60Q8IWA6 550 aaPredicted RBP7.54□□□□□ -1.2
CLCN3-206ENST00000507875 FBXO16Q8IX29 292 aaPredicted RBP7.54□□□□□ -1.2
CLCN3-206ENST00000507875 C12orf56Q8IXR9 622 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 DCLK2Q8N568 766 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 TC2NQ8N9U0 490 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 KIAA0895Q8NCT3 520 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 KIF18AQ8NI77 898 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 PIGOQ8TEQ8 1089 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 ATP8B4Q8TF62 1192 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 JAKMIP2Q96AA8 810 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 ASIC4Q96FT7 647 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 SPATA33Q96N06 139 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 YIPF2Q9BWQ6 316 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 STRA6Q9BX79 667 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 ARFGAP3Q9NP61 516 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 ERAP1Q9NZ08 941 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 WRAP73Q9P2S5 460 aaPredicted RBP7.54□□□□□ -1.2
CLCN3-206ENST00000507875 GDF2Q9UK05 429 aaPredicted RBP7.54□□□□□ -1.2
CLCN3-206ENST00000507875 ZNF215Q9UL58 517 aaPredicted RBP7.54□□□□□ -1.2
CLCN3-206ENST00000507875 LRCH1Q9Y2L9 728 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 SPO11Q9Y5K1 396 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 TRIM64A6NGJ6 449 aa7.53□□□□□ -1.2
CLCN3-206ENST00000507875 TRIM64BA6NI03 449 aa7.53□□□□□ -1.2
CLCN3-206ENST00000507875 MAPK13O15264 365 aa7.53□□□□□ -1.2
CLCN3-206ENST00000507875 MAGEB2O15479 319 aa7.53□□□□□ -1.2
CLCN3-206ENST00000507875 ARHGAP6O43182 974 aa7.53□□□□□ -1.2
CLCN3-206ENST00000507875 STX10O60499 249 aa7.53□□□□□ -1.2
CLCN3-206ENST00000507875 TIPRLO75663 272 aa7.53□□□□□ -1.2
CLCN3-206ENST00000507875 GFPT2O94808 682 aa7.53□□□□□ -1.2
CLCN3-206ENST00000507875 SLITRK5O94991 958 aa7.53□□□□□ -1.2
CLCN3-206ENST00000507875 RAC2P15153 192 aa7.53□□□□□ -1.2
CLCN3-206ENST00000507875 NCKAP1LP55160 1127 aa7.53□□□□□ -1.2
CLCN3-206ENST00000507875 MPP1Q00013 466 aa7.53□□□□□ -1.2
CLCN3-206ENST00000507875 TNFAIP2Q03169 654 aa7.53□□□□□ -1.2
CLCN3-206ENST00000507875 PRKCZQ05513 592 aa7.53□□□□□ -1.2
CLCN3-206ENST00000507875 GOLGA8FQ08AF8 430 aa7.53□□□□□ -1.2
CLCN3-206ENST00000507875 GOLGA8DPQ0D2H9 430 aa7.53□□□□□ -1.2
CLCN3-206ENST00000507875 MAPK7Q13164 816 aa7.53□□□□□ -1.2
CLCN3-206ENST00000507875 IFI16Q16666 785 aaKnown RBP7.53□□□□□ -1.2
CLCN3-206ENST00000507875 UGCGQ16739 394 aa7.53□□□□□ -1.2
CLCN3-206ENST00000507875 LY6KQ17RY6 165 aa7.53□□□□□ -1.2
CLCN3-206ENST00000507875 KNOP1Q1ED39 458 aaKnown RBP7.53□□□□□ -1.2
CLCN3-206ENST00000507875 PREPLQ4J6C6 727 aaPredicted RBP7.53□□□□□ -1.2
CLCN3-206ENST00000507875 CFAP58Q5T655 872 aa7.53□□□□□ -1.2
CLCN3-206ENST00000507875 ANO5Q75V66 913 aa7.53□□□□□ -1.2
CLCN3-206ENST00000507875 CEP170P1Q96L14 293 aa7.53□□□□□ -1.2
CLCN3-206ENST00000507875 IFT74Q96LB3 600 aa7.53□□□□□ -1.2
CLCN3-206ENST00000507875 C1orf74Q96LT6 269 aa7.53□□□□□ -1.2
CLCN3-206ENST00000507875 ZMAT2Q96NC0 199 aaKnown RBP7.53□□□□□ -1.2
CLCN3-206ENST00000507875 BAG1Q99933 345 aaPredicted RBP7.53□□□□□ -1.2
CLCN3-206ENST00000507875 DHX33Q9H6R0 707 aaKnown RBP7.53□□□□□ -1.2
CLCN3-206ENST00000507875 FRRS1LQ9P0K9 344 aa7.53□□□□□ -1.2
CLCN3-206ENST00000507875 TBC1D7Q9P0N9 293 aa7.53□□□□□ -1.2
CLCN3-206ENST00000507875 ZMAT5Q9UDW3 170 aaKnown RBP7.53□□□□□ -1.2
CLCN3-206ENST00000507875 GDAQ9Y2T3 454 aa7.53□□□□□ -1.2
CLCN3-206ENST00000507875 F8W8V4 182 aa7.53□□□□□ -1.2
CLCN3-206ENST00000507875 SLC16A3O15427 465 aaKnown RBP7.53□□□□□ -1.2
CLCN3-206ENST00000507875 MEFVO15553 781 aaPredicted RBP7.53□□□□□ -1.2
CLCN3-206ENST00000507875 TEX33O43247 280 aa7.53□□□□□ -1.2
CLCN3-206ENST00000507875 MAFO75444 373 aaPredicted RBP7.53□□□□□ -1.2
CLCN3-206ENST00000507875 ARIH2O95376 493 aa7.53□□□□□ -1.2
CLCN3-206ENST00000507875 POLBP06746 335 aa7.53□□□□□ -1.2
CLCN3-206ENST00000507875 ZNF865P0CJ78 1059 aaPredicted RBP7.53□□□□□ -1.2
CLCN3-206ENST00000507875 RPL17P18621 184 aaKnown RBP7.53□□□□□ -1.2
CLCN3-206ENST00000507875 PBX1P40424 430 aa7.53□□□□□ -1.2
CLCN3-206ENST00000507875 CCT5P48643 541 aa7.53□□□□□ -1.2
CLCN3-206ENST00000507875 FLT3LGP49771 235 aa7.53□□□□□ -1.2
CLCN3-206ENST00000507875 SEPHS1P49903 392 aa7.53□□□□□ -1.2
CLCN3-206ENST00000507875 CPT1AP50416 773 aa7.53□□□□□ -1.2
CLCN3-206ENST00000507875 TUBP50607 506 aa7.53□□□□□ -1.2
CLCN3-206ENST00000507875 KIF11P52732 1056 aa7.53□□□□□ -1.2
CLCN3-206ENST00000507875 ADKP55263 362 aaKnown RBP7.53□□□□□ -1.2
CLCN3-206ENST00000507875 GTF2BQ00403 316 aa7.53□□□□□ -1.2
CLCN3-206ENST00000507875 FKBP3Q00688 224 aaKnown RBP7.53□□□□□ -1.2
CLCN3-206ENST00000507875 CAP1Q01518 475 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms