RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 DUOXA2Q1HG44 320 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 PREPLQ4J6C6 727 aaPredicted RBP6.11□□□□□ -1.43
GYPB-208ENST00000507009 HECTD3Q5T447 861 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 PEAR1Q5VY43 1037 aaPredicted RBP6.11□□□□□ -1.43
GYPB-208ENST00000507009 RRAGBQ5VZM2 374 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 SCARA5Q6ZMJ2 495 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 CCNI2Q6ZMN8 369 aaPredicted RBP6.11□□□□□ -1.43
GYPB-208ENST00000507009 TOGARAM2Q6ZUX3 1019 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 SV2BQ7L1I2 683 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 SLCO6A1Q86UG4 719 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 FAM124AQ86V42 546 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 CBWD2Q8IUF1 395 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 GPD1LQ8N335 351 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 PHTF2Q8N3S3 785 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 SCAMP5Q8TAC9 235 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 CXorf38Q8TB03 319 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 PIP4K2CQ8TBX8 421 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 MYCBPAPQ8TBZ2 947 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 ADAMTS14Q8WXS8 1223 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 KCNN1Q92952 543 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 HPS3Q969F9 1004 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 ELMO3Q96BJ8 720 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 C8orf48Q96LL4 319 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 KCNK16Q96T55 309 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 TTLL2Q9BWV7 592 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 GPR174Q9BXC1 333 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 BBS2Q9BXC9 721 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 B3GNT5Q9BYG0 378 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 ST6GALNAC4Q9H4F1 302 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 FAM124BQ9H5Z6 455 aaPredicted RBP6.11□□□□□ -1.43
GYPB-208ENST00000507009 GAREM1Q9H706 876 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 TMEM30AQ9NV96 361 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 PANK4Q9NVE7 773 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 INTS13Q9NVM9 706 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 DNAAF2Q9NVR5 837 aaKnown RBP6.11□□□□□ -1.43
GYPB-208ENST00000507009 PLK2Q9NYY3 685 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 GMPR2Q9P2T1 348 aaKnown RBP6.11□□□□□ -1.43
GYPB-208ENST00000507009 CCDC39Q9UFE4 941 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 HCN2Q9UL51 889 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 NME7Q9Y5B8 376 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 PTPRBP23467 1997 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 MYH10P35580 1976 aa6.11□□□□□ -1.43
GYPB-208ENST00000507009 ATP8B3O60423 1300 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 IGSF10Q6WRI0 2623 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 VPS37CA5D8V6 355 aaPredicted RBP6.1□□□□□ -1.43
GYPB-208ENST00000507009 FAM221BA6H8Z2 402 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 PRRT4C9JH25 899 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 MDM4O15151 490 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 HOXC11O43248 304 aaPredicted RBP6.1□□□□□ -1.43
GYPB-208ENST00000507009 SLC26A4O43511 780 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 PHACTR2O75167 634 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 AP1G2O75843 785 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 DXOO77932 396 aaKnown RBP6.1□□□□□ -1.43
GYPB-208ENST00000507009 RTN3O95197 1032 aaPredicted RBP6.1□□□□□ -1.43
GYPB-208ENST00000507009 OLFM2O95897 454 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 TBX18O95935 607 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 CST3P01034 146 aaPredicted RBP6.1□□□□□ -1.43
GYPB-208ENST00000507009 CAPNS1P04632 268 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 HMBSP08397 361 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 ATXN1LP0C7T5 689 aaKnown RBP6.1□□□□□ -1.43
GYPB-208ENST00000507009 NCAM1P13591 858 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 TYRP14679 529 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 PFKLP17858 780 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 TNNI1P19237 187 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 TXLNAP40222 546 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 STAT6P42226 847 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 MATKP42679 507 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 CYP2J2P51589 502 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 SLC5A3P53794 718 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 CDH8P55286 799 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 POU5F1Q01860 360 aaKnown RBP6.1□□□□□ -1.43
GYPB-208ENST00000507009 GUCA2AQ02747 115 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 TRPC3Q13507 836 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 WDR72Q3MJ13 1102 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 WDR45BQ5MNZ6 344 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 DCAF12L1Q5VU92 463 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 DPH6Q7L8W6 267 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 TRAPPC11Q7Z392 1133 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 FAM35AQ86V20 835 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 ETFBKMTQ8IXQ9 262 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 NUP93Q8N1F7 819 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 B3GALNT2Q8NCR0 500 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 GLIS3Q8NEA6 775 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 PDZD8Q8NEN9 1154 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 SNIP1Q8TAD8 396 aaKnown RBP6.1□□□□□ -1.43
GYPB-208ENST00000507009 RHBDD1Q8TEB9 315 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 FOXJ1Q92949 421 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 COL26A1Q96A83 441 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 CCDC127Q96BQ5 260 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 TOE1Q96GM8 510 aaKnown RBP6.1□□□□□ -1.43
GYPB-208ENST00000507009 MRGPRX2Q96LB1 330 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 MRGPRX1Q96LB2 322 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 CLIC6Q96NY7 704 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 XPO6Q96QU8 1125 aaKnown RBP6.1□□□□□ -1.43
GYPB-208ENST00000507009 ELOVL4Q9GZR5 314 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.1□□□□□ -1.432e-23■■■■■ 397.5
GYPB-208ENST00000507009 TM7SF3Q9NS93 570 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 SEL1LQ9UBV2 794 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 SUSD2Q9UGT4 822 aa6.1□□□□□ -1.43
GYPB-208ENST00000507009 LSM7Q9UK45 103 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms