RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 PKDCCQ504Y2 493 aa7.63□□□□□ -1.19
GYPB-206ENST00000506516 C4orf48Q5BLP8 95 aa7.63□□□□□ -1.19
GYPB-206ENST00000506516 BTBD8Q5XKL5 378 aa7.63□□□□□ -1.19
GYPB-206ENST00000506516 PM20D1Q6GTS8 502 aa7.63□□□□□ -1.19
GYPB-206ENST00000506516 KLHDC10Q6PID8 442 aa7.63□□□□□ -1.19
GYPB-206ENST00000506516 ZNF852Q6ZMS4 543 aa7.63□□□□□ -1.19
GYPB-206ENST00000506516 HFE2Q6ZVN8 426 aa7.63□□□□□ -1.19
GYPB-206ENST00000506516 GPRIN1Q7Z2K8 1008 aa7.63□□□□□ -1.19
GYPB-206ENST00000506516 FAM71AQ8IYT1 594 aa7.63□□□□□ -1.19
GYPB-206ENST00000506516 FBXL6Q8N531 539 aa7.63□□□□□ -1.19
GYPB-206ENST00000506516 KIAA1958Q8N8K9 716 aa7.63□□□□□ -1.19
GYPB-206ENST00000506516 SH3RF2Q8TEC5 729 aa7.63□□□□□ -1.19
GYPB-206ENST00000506516 IRGQQ8WZA9 623 aa7.63□□□□□ -1.19
GYPB-206ENST00000506516 EXOC4Q96A65 974 aa7.63□□□□□ -1.19
GYPB-206ENST00000506516 RSPRY1Q96DX4 576 aa7.63□□□□□ -1.19
GYPB-206ENST00000506516 MSANTD3Q96H12 275 aa7.63□□□□□ -1.19
GYPB-206ENST00000506516 LRRC3BQ96PB8 259 aa7.63□□□□□ -1.19
GYPB-206ENST00000506516 NOX5Q96PH1 765 aa7.63□□□□□ -1.19
GYPB-206ENST00000506516 SPAG5Q96R06 1193 aa7.63□□□□□ -1.19
GYPB-206ENST00000506516 UCN2Q96RP3 112 aa7.63□□□□□ -1.19
GYPB-206ENST00000506516 ERGIC2Q96RQ1 377 aa7.63□□□□□ -1.19
GYPB-206ENST00000506516 NAA15Q9BXJ9 866 aaKnown RBP7.63□□□□□ -1.19
GYPB-206ENST00000506516 ULBP1Q9BZM6 244 aa7.63□□□□□ -1.19
GYPB-206ENST00000506516 LHX5Q9H2C1 402 aa7.63□□□□□ -1.19
GYPB-206ENST00000506516 C8orf33Q9H7E9 229 aaPredicted RBP7.63□□□□□ -1.19
GYPB-206ENST00000506516 CCSER2Q9H7U1 834 aa7.63□□□□□ -1.19
GYPB-206ENST00000506516 CNGB3Q9NQW8 809 aa7.63□□□□□ -1.19
GYPB-206ENST00000506516 ST7Q9NRC1 585 aa7.63□□□□□ -1.19
GYPB-206ENST00000506516 FAM207AQ9NSI2 230 aaPredicted RBP7.63□□□□□ -1.19
GYPB-206ENST00000506516 DUS2Q9NX74 493 aaKnown RBP7.63□□□□□ -1.19
GYPB-206ENST00000506516 CLIC5Q9NZA1 410 aa7.63□□□□□ -1.19
GYPB-206ENST00000506516 DNMT3LQ9UJW3 386 aa7.63□□□□□ -1.19
GYPB-206ENST00000506516 CCL26Q9Y258 94 aa7.63□□□□□ -1.19
GYPB-206ENST00000506516 MRPS17Q9Y2R5 130 aaKnown RBP7.63□□□□□ -1.19
GYPB-206ENST00000506516 FHOD1Q9Y613 1164 aa7.63□□□□□ -1.19
GYPB-206ENST00000506516 CPQQ9Y646 472 aa7.63□□□□□ -1.19
GYPB-206ENST00000506516 A0A1W2PQH9 124 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 KANSL1LA0AUZ9 987 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 E2F8A0AVK6 867 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 KRBA1A5PL33 1030 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 NCAM2O15394 837 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 SART1O43290 800 aaKnown RBP7.62□□□□□ -1.19
GYPB-206ENST00000506516 FBXO21O94952 628 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 CALCAP01258 141 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 CCDC172P0C7W6 258 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 STAT1P42224 750 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 IFNAR2P48551 515 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 RGS7P49802 495 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 YWHAGP61981 247 aaKnown RBP eCLIP7.62□□□□□ -1.19
GYPB-206ENST00000506516 COG7P83436 770 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 ADIGQ0VDE8 80 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 RUNX3Q13761 415 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 NR1I3Q14994 352 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 ZNF77Q15935 545 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 ITPRIPL2Q3MIP1 535 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 C10orf120Q5SQS8 335 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 BSPRYQ5W0U4 402 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 DPY19L2P1Q6NXN4 242 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 PMF1Q6P1K2 205 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 LRSAM1Q6UWE0 723 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 RSRC2Q7L4I2 434 aaKnown RBP7.62□□□□□ -1.19
GYPB-206ENST00000506516 APTXQ7Z2E3 356 aaKnown RBP7.62□□□□□ -1.19
GYPB-206ENST00000506516 CACNA2D4Q7Z3S7 1137 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 SCD5Q86SK9 330 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 LUZP1Q86V48 1076 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 SLC47A2Q86VL8 602 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 FMNL3Q8IVF7 1028 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 SCML4Q8N228 414 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 RNF139Q8WU17 664 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 OSCP1Q8WVF1 389 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 FAM3CQ92520 227 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 ATP2A3Q93084 1043 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 ZFYVE19Q96K21 471 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 FAM83CQ9BQN1 747 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 ZSWIM1Q9BR11 485 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 TRIM62Q9BVG3 475 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 TSPY26PQ9H489 355 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 NMUR1Q9HB89 426 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 ACP6Q9NPH0 428 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 NLRC4Q9NPP4 1024 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 C11orf16Q9NQ32 467 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 CYLDQ9NQC7 956 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 HEBP1Q9NRV9 189 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 ABCC13Q9NSE7 274 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 OLA1Q9NTK5 396 aaKnown RBP7.62□□□□□ -1.19
GYPB-206ENST00000506516 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.62□□□□□ -1.19
GYPB-206ENST00000506516 SMPD4Q9NXE4 827 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 TBC1D14Q9P2M4 693 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 LSM7Q9UK45 103 aaKnown RBP7.62□□□□□ -1.19
GYPB-206ENST00000506516 AJAP1Q9UKB5 411 aaPredicted RBP7.62□□□□□ -1.19
GYPB-206ENST00000506516 STRIP2Q9ULQ0 834 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 SIK3Q9Y2K2 1263 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 SH3BP1Q9Y3L3 701 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 SIT1Q9Y3P8 196 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 PIAS3Q9Y6X2 628 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 NOTCH4Q99466 2003 aa7.62□□□□□ -1.19
GYPB-206ENST00000506516 A0A1B0GTH6 734 aa7.61□□□□□ -1.19
GYPB-206ENST00000506516 A0A1W2PQC6 194 aa7.61□□□□□ -1.19
GYPB-206ENST00000506516 FAM170BA6NMN3 283 aa7.61□□□□□ -1.19
GYPB-206ENST00000506516 YJEFN3A6XGL0 299 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms