RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 HTR3DQ70Z44 454 aa17.47■□□□□ 0.39
SNCA-209ENST00000506244 ZNF677Q86XU0 584 aa17.47■□□□□ 0.39
SNCA-209ENST00000506244 PASD1Q8IV76 773 aa17.47■□□□□ 0.39
SNCA-209ENST00000506244 MSANTD4Q8NCY6 345 aa17.47■□□□□ 0.39
SNCA-209ENST00000506244 CLDN23Q96B33 292 aa17.47■□□□□ 0.39
SNCA-209ENST00000506244 PLD4Q96BZ4 506 aa17.47■□□□□ 0.39
SNCA-209ENST00000506244 DCLK3Q9C098 648 aa17.47■□□□□ 0.39
SNCA-209ENST00000506244 MIS12Q9H081 205 aa17.47■□□□□ 0.39
SNCA-209ENST00000506244 NLRC4Q9NPP4 1024 aa17.47■□□□□ 0.39
SNCA-209ENST00000506244 RTN4Q9NQC3 1192 aaKnown RBP17.47■□□□□ 0.39
SNCA-209ENST00000506244 NUDT5Q9UKK9 219 aa17.47■□□□□ 0.39
SNCA-209ENST00000506244 SHISA7A6NL88 538 aa17.46■□□□□ 0.39
SNCA-209ENST00000506244 E5RJQ4 531 aa17.46■□□□□ 0.39
SNCA-209ENST00000506244 PIK3R2O00459 728 aa17.46■□□□□ 0.39
SNCA-209ENST00000506244 MDM4O15151 490 aa17.46■□□□□ 0.39
SNCA-209ENST00000506244 LSM8O95777 96 aaKnown RBP17.46■□□□□ 0.39
SNCA-209ENST00000506244 SOX5P35711 763 aa17.46■□□□□ 0.39
SNCA-209ENST00000506244 JAM2P57087 298 aa17.46■□□□□ 0.39
SNCA-209ENST00000506244 PON2Q15165 354 aa17.46■□□□□ 0.39
SNCA-209ENST00000506244 NFKBIBQ15653 356 aa17.46■□□□□ 0.39
SNCA-209ENST00000506244 MSANTD2Q6P1R3 559 aa17.46■□□□□ 0.39
SNCA-209ENST00000506244 TXNDC11Q6PKC3 985 aa17.46■□□□□ 0.39
SNCA-209ENST00000506244 CACNA2D4Q7Z3S7 1137 aa17.46■□□□□ 0.39
SNCA-209ENST00000506244 TMEM110Q86TL2 294 aa17.46■□□□□ 0.39
SNCA-209ENST00000506244 LUZP1Q86V48 1076 aa17.46■□□□□ 0.39
SNCA-209ENST00000506244 SYNPOQ8N3V7 929 aa17.46■□□□□ 0.39
SNCA-209ENST00000506244 TMEM35BQ8NCS4 154 aa17.46■□□□□ 0.39
SNCA-209ENST00000506244 EPS8L1Q8TE68 723 aa17.46■□□□□ 0.39
SNCA-209ENST00000506244 FAM149B1Q96BN6 582 aa17.46■□□□□ 0.39
SNCA-209ENST00000506244 PPP1R13BQ96KQ4 1090 aa17.46■□□□□ 0.39
SNCA-209ENST00000506244 LINC00597Q9H2U6 94 aa17.46■□□□□ 0.39
SNCA-209ENST00000506244 SYNCQ9H7C4 482 aa17.46■□□□□ 0.39
SNCA-209ENST00000506244 DLGAP2Q9P1A6 1054 aa17.46■□□□□ 0.39
SNCA-209ENST00000506244 HBS1LQ9Y450 684 aaKnown RBP17.46■□□□□ 0.39
SNCA-209ENST00000506244 A0A1W2PQC6 194 aa17.45■□□□□ 0.38
SNCA-209ENST00000506244 OTOL1A6NHN0 477 aaPredicted RBP17.45■□□□□ 0.38
SNCA-209ENST00000506244 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.45■□□□□ 0.38
SNCA-209ENST00000506244 TRDMT1O14717 391 aaKnown RBP17.45■□□□□ 0.38
SNCA-209ENST00000506244 STC2O76061 302 aa17.45■□□□□ 0.38
SNCA-209ENST00000506244 GFPT2O94808 682 aa17.45■□□□□ 0.38
SNCA-209ENST00000506244 CCDC172P0C7W6 258 aa17.45■□□□□ 0.38
SNCA-209ENST00000506244 ADH5P11766 374 aa17.45■□□□□ 0.38
SNCA-209ENST00000506244 DRD1P21728 446 aa17.45■□□□□ 0.38
SNCA-209ENST00000506244 DHCR24Q15392 516 aa17.45■□□□□ 0.38
SNCA-209ENST00000506244 TOGARAM2Q6ZUX3 1019 aa17.45■□□□□ 0.38
SNCA-209ENST00000506244 BEND5Q7L4P6 421 aa17.45■□□□□ 0.38
SNCA-209ENST00000506244 BBS7Q8IWZ6 715 aa17.45■□□□□ 0.38
SNCA-209ENST00000506244 ADGRG2Q8IZP9 1017 aa17.45■□□□□ 0.38
SNCA-209ENST00000506244 ZNF687Q8N1G0 1237 aa17.45■□□□□ 0.38
SNCA-209ENST00000506244 C1orf131Q8NDD1 294 aaKnown RBP17.45■□□□□ 0.38
SNCA-209ENST00000506244 CCDC26Q8TAB7 109 aa17.45■□□□□ 0.38
SNCA-209ENST00000506244 NDRG1Q92597 394 aaKnown RBP17.45■□□□□ 0.38
SNCA-209ENST00000506244 EDEM1Q92611 657 aa17.45■□□□□ 0.38
SNCA-209ENST00000506244 CD101Q93033 1021 aa17.45■□□□□ 0.38
SNCA-209ENST00000506244 P2RY13Q9BPV8 354 aa17.45■□□□□ 0.38
SNCA-209ENST00000506244 CHRDQ9H2X0 955 aa17.45■□□□□ 0.38
SNCA-209ENST00000506244 CYTH4Q9UIA0 394 aa17.45■□□□□ 0.38
SNCA-209ENST00000506244 MTF2Q9Y483 593 aaPredicted RBP17.45■□□□□ 0.38
SNCA-209ENST00000506244 A0A1B0GTH6 734 aa17.44■□□□□ 0.38
SNCA-209ENST00000506244 SLC12A8A0AV02 714 aa17.44■□□□□ 0.38
SNCA-209ENST00000506244 CAPN9O14815 690 aa17.44■□□□□ 0.38
SNCA-209ENST00000506244 SCAMP3O14828 347 aaKnown RBP17.44■□□□□ 0.38
SNCA-209ENST00000506244 EPHB6O15197 1021 aa17.44■□□□□ 0.38
SNCA-209ENST00000506244 EIF2DP41214 584 aaKnown RBP17.44■□□□□ 0.38
SNCA-209ENST00000506244 HARS2P49590 506 aaKnown RBP17.44■□□□□ 0.38
SNCA-209ENST00000506244 GAD2Q05329 585 aa17.44■□□□□ 0.38
SNCA-209ENST00000506244 PREPLQ4J6C6 727 aaPredicted RBP17.44■□□□□ 0.38
SNCA-209ENST00000506244 TMEM196Q5HYL7 178 aa17.44■□□□□ 0.38
SNCA-209ENST00000506244 ZDHHC17Q8IUH5 632 aa17.44■□□□□ 0.38
SNCA-209ENST00000506244 SCUBE3Q8IX30 993 aa17.44■□□□□ 0.38
SNCA-209ENST00000506244 CLEC4CQ8WTT0 213 aa17.44■□□□□ 0.38
SNCA-209ENST00000506244 SERPINB11Q96P15 392 aa17.44■□□□□ 0.38
SNCA-209ENST00000506244 CPXM1Q96SM3 734 aa17.44■□□□□ 0.38
SNCA-209ENST00000506244 POPDC2Q9HBU9 364 aa17.44■□□□□ 0.38
SNCA-209ENST00000506244 SPHK2Q9NRA0 654 aa17.44■□□□□ 0.38
SNCA-209ENST00000506244 MYO6Q9UM54 1294 aa17.44■□□□□ 0.38
SNCA-209ENST00000506244 MUC6Q6W4X9 2439 aa17.43■□□□□ 0.38
SNCA-209ENST00000506244 HOXC11O43248 304 aaPredicted RBP17.43■□□□□ 0.38
SNCA-209ENST00000506244 PAPSS1O43252 624 aaPredicted RBP17.43■□□□□ 0.38
SNCA-209ENST00000506244 GREM1O60565 184 aa17.43■□□□□ 0.38
SNCA-209ENST00000506244 GABBR2O75899 941 aa17.43■□□□□ 0.38
SNCA-209ENST00000506244 TPM3P06753 285 aa17.43■□□□□ 0.38
SNCA-209ENST00000506244 GLI1P08151 1106 aa17.43■□□□□ 0.38
SNCA-209ENST00000506244 CHRNB1P11230 501 aa17.43■□□□□ 0.38
SNCA-209ENST00000506244 NCAM1P13591 858 aa17.43■□□□□ 0.38
SNCA-209ENST00000506244 CORO1AP31146 461 aaKnown RBP17.43■□□□□ 0.38
SNCA-209ENST00000506244 CDH5P33151 784 aaPredicted RBP17.43■□□□□ 0.38
SNCA-209ENST00000506244 CHKAP35790 457 aa17.43■□□□□ 0.38
SNCA-209ENST00000506244 CDR2Q01850 454 aa17.43■□□□□ 0.38
SNCA-209ENST00000506244 NNTQ13423 1086 aa17.43■□□□□ 0.38
SNCA-209ENST00000506244 CCINQ13939 588 aa17.43■□□□□ 0.38
SNCA-209ENST00000506244 PPP2R5DQ14738 602 aa17.43■□□□□ 0.38
SNCA-209ENST00000506244 FBXO43Q4G163 708 aa17.43■□□□□ 0.38
SNCA-209ENST00000506244 EFHC1Q5JVL4 640 aa17.43■□□□□ 0.38
SNCA-209ENST00000506244 LY6G5CQ5SRR4 150 aa17.43■□□□□ 0.38
SNCA-209ENST00000506244 TAF3Q5VWG9 929 aa17.43■□□□□ 0.38
SNCA-209ENST00000506244 TRIM72Q6ZMU5 477 aa17.43■□□□□ 0.38
SNCA-209ENST00000506244 Q6ZNB5 142 aa17.43■□□□□ 0.38
SNCA-209ENST00000506244 NOP9Q86U38 636 aaKnown RBP17.43■□□□□ 0.38
SNCA-209ENST00000506244 C1orf210Q8IVY1 113 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms