RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 CBLBQ13191 982 aa12.33□□□□□ -0.44
UBE3D-206ENST00000505226 GSTA3Q16772 222 aa12.33□□□□□ -0.44
UBE3D-206ENST00000505226 CA9Q16790 459 aa12.33□□□□□ -0.44
UBE3D-206ENST00000505226 FAM102AQ5T9C2 384 aaPredicted RBP12.33□□□□□ -0.44
UBE3D-206ENST00000505226 ATG16L1Q676U5 607 aa12.33□□□□□ -0.44
UBE3D-206ENST00000505226 MAVSQ7Z434 540 aa12.33□□□□□ -0.44
UBE3D-206ENST00000505226 RNF157Q96PX1 679 aa12.33□□□□□ -0.44
UBE3D-206ENST00000505226 NDE1Q9NXR1 346 aa12.33□□□□□ -0.44
UBE3D-206ENST00000505226 KCNG1Q9UIX4 513 aa12.33□□□□□ -0.44
UBE3D-206ENST00000505226 EMCNQ9ULC0 261 aa12.33□□□□□ -0.44
UBE3D-206ENST00000505226 NR2E3Q9Y5X4 410 aa12.33□□□□□ -0.44
UBE3D-206ENST00000505226 IGKV6D-21A0A0A0MT36 114 aa12.32□□□□□ -0.44
UBE3D-206ENST00000505226 KLHL33A6NCF5 533 aa12.32□□□□□ -0.44
UBE3D-206ENST00000505226 OGTO15294 1046 aa12.32□□□□□ -0.44
UBE3D-206ENST00000505226 B4GALT5O43286 388 aa12.32□□□□□ -0.44
UBE3D-206ENST00000505226 RNF8O76064 485 aa12.32□□□□□ -0.44
UBE3D-206ENST00000505226 METTL18O95568 372 aa12.32□□□□□ -0.44
UBE3D-206ENST00000505226 SERPINA6P08185 405 aa12.32□□□□□ -0.44
UBE3D-206ENST00000505226 OSBPP22059 807 aa12.32□□□□□ -0.44
UBE3D-206ENST00000505226 ARRB2P32121 409 aa12.32□□□□□ -0.44
UBE3D-206ENST00000505226 GPD2P43304 727 aa12.32□□□□□ -0.44
UBE3D-206ENST00000505226 GRM1Q13255 1194 aa12.32□□□□□ -0.44
UBE3D-206ENST00000505226 CRLF3Q8IUI8 442 aa12.32□□□□□ -0.44
UBE3D-206ENST00000505226 STKLD1Q8NE28 680 aa12.32□□□□□ -0.44
UBE3D-206ENST00000505226 SIGLEC10Q96LC7 697 aa12.32□□□□□ -0.44
UBE3D-206ENST00000505226 APOL6Q9BWW8 343 aa12.32□□□□□ -0.44
UBE3D-206ENST00000505226 QTRT2Q9H974 415 aaKnown RBP12.32□□□□□ -0.44
UBE3D-206ENST00000505226 ETNK2Q9NVF9 386 aa12.32□□□□□ -0.44
UBE3D-206ENST00000505226 STK32BQ9NY57 414 aa12.32□□□□□ -0.44
UBE3D-206ENST00000505226 AFG3L2Q9Y4W6 797 aa12.32□□□□□ -0.44
UBE3D-206ENST00000505226 KRT19P08727 400 aa12.32□□□□□ -0.44
UBE3D-206ENST00000505226 CYP3A5P20815 502 aa12.32□□□□□ -0.44
UBE3D-206ENST00000505226 ZNF143P52747 638 aaPredicted RBP12.32□□□□□ -0.44
UBE3D-206ENST00000505226 AP2B1P63010 937 aa12.32□□□□□ -0.44
UBE3D-206ENST00000505226 CNPY1Q3B7I2 92 aa12.32□□□□□ -0.44
UBE3D-206ENST00000505226 SFT2D3Q587I9 215 aa12.32□□□□□ -0.44
UBE3D-206ENST00000505226 RABGAP1LQ5R372 815 aa12.32□□□□□ -0.44
UBE3D-206ENST00000505226 TMCO4Q5TGY1 634 aa12.32□□□□□ -0.44
UBE3D-206ENST00000505226 LPCAT4Q643R3 524 aa12.32□□□□□ -0.44
UBE3D-206ENST00000505226 EFCAB3Q8N7B9 438 aa12.32□□□□□ -0.44
UBE3D-206ENST00000505226 PCDH19Q8TAB3 1148 aa12.32□□□□□ -0.44
UBE3D-206ENST00000505226 RXFP2Q8WXD0 754 aa12.32□□□□□ -0.44
UBE3D-206ENST00000505226 BCO2Q9BYV7 579 aa12.32□□□□□ -0.44
UBE3D-206ENST00000505226 SHCBP1LQ9BZQ2 653 aa12.32□□□□□ -0.44
UBE3D-206ENST00000505226 TRIM4Q9C037 500 aa12.32□□□□□ -0.44
UBE3D-206ENST00000505226 PDP2Q9P2J9 529 aa12.32□□□□□ -0.44
UBE3D-206ENST00000505226 ADAMTS6Q9UKP5 1117 aa12.32□□□□□ -0.44
UBE3D-206ENST00000505226 GSTT1P30711 240 aa12.31□□□□□ -0.44
UBE3D-206ENST00000505226 CRHR1P34998 444 aa12.31□□□□□ -0.44
UBE3D-206ENST00000505226 MAGEA3P43357 314 aa12.31□□□□□ -0.44
UBE3D-206ENST00000505226 GABRB2P47870 512 aa12.31□□□□□ -0.44
UBE3D-206ENST00000505226 MSLNQ13421 630 aaPredicted RBP12.31□□□□□ -0.44
UBE3D-206ENST00000505226 PEX6Q13608 980 aa12.31□□□□□ -0.44
UBE3D-206ENST00000505226 EEF1DP3Q658K8 133 aa12.31□□□□□ -0.44
UBE3D-206ENST00000505226 MAP1SQ66K74 1059 aaPredicted RBP12.31□□□□□ -0.44
UBE3D-206ENST00000505226 DENND5BQ6ZUT9 1274 aa12.31□□□□□ -0.44
UBE3D-206ENST00000505226 DPH6Q7L8W6 267 aa12.31□□□□□ -0.44
UBE3D-206ENST00000505226 LRRC71Q8N4P6 559 aa12.31□□□□□ -0.44
UBE3D-206ENST00000505226 RTP4Q96DX8 246 aa12.31□□□□□ -0.44
UBE3D-206ENST00000505226 CDHR1Q96JP9 859 aa12.31□□□□□ -0.44
UBE3D-206ENST00000505226 ADPGKQ9BRR6 497 aa12.31□□□□□ -0.44
UBE3D-206ENST00000505226 MRPL4Q9BYD3 311 aaKnown RBP12.31□□□□□ -0.44
UBE3D-206ENST00000505226 PAK5Q9P286 719 aa12.31□□□□□ -0.44
UBE3D-206ENST00000505226 ANK1P16157 1881 aa12.31□□□□□ -0.44
UBE3D-206ENST00000505226 BPTFQ12830 3046 aa12.31□□□□□ -0.44
UBE3D-206ENST00000505226 FAM159BA6NKW6 160 aa12.31□□□□□ -0.44
UBE3D-206ENST00000505226 C2CD4BA6NLJ0 364 aa12.31□□□□□ -0.44
UBE3D-206ENST00000505226 TRDMT1O14717 391 aaKnown RBP12.31□□□□□ -0.44
UBE3D-206ENST00000505226 CIB2O75838 187 aa12.31□□□□□ -0.44
UBE3D-206ENST00000505226 CD1EP15812 388 aa12.31□□□□□ -0.44
UBE3D-206ENST00000505226 AOC1P19801 751 aa12.31□□□□□ -0.44
UBE3D-206ENST00000505226 GRIA2P42262 883 aa12.31□□□□□ -0.44
UBE3D-206ENST00000505226 STX3Q13277 289 aa12.31□□□□□ -0.44
UBE3D-206ENST00000505226 CCNIQ14094 377 aa12.31□□□□□ -0.44
UBE3D-206ENST00000505226 ZRSR2Q15696 482 aaKnown RBP12.31□□□□□ -0.44
UBE3D-206ENST00000505226 DPY19L2Q6NUT2 758 aa12.31□□□□□ -0.44
UBE3D-206ENST00000505226 KYAT3Q6YP21 454 aaKnown RBP12.31□□□□□ -0.44
UBE3D-206ENST00000505226 GBP5Q96PP8 586 aa12.31□□□□□ -0.44
UBE3D-206ENST00000505226 C1orf21Q9H246 121 aa12.31□□□□□ -0.44
UBE3D-206ENST00000505226 XAB2Q9HCS7 855 aaKnown RBP12.31□□□□□ -0.44
UBE3D-206ENST00000505226 S100A14Q9HCY8 104 aa12.31□□□□□ -0.44
UBE3D-206ENST00000505226 MKS1Q9NXB0 559 aa12.31□□□□□ -0.44
UBE3D-206ENST00000505226 ADAMTS5Q9UNA0 930 aa12.31□□□□□ -0.44
UBE3D-206ENST00000505226 TBC1D30Q9Y2I9 924 aa12.31□□□□□ -0.44
UBE3D-206ENST00000505226 M0QYV0 167 aa12.31□□□□□ -0.44
UBE3D-206ENST00000505226 PDE5AO76074 875 aa12.31□□□□□ -0.44
UBE3D-206ENST00000505226 CXCL8P10145 99 aa12.31□□□□□ -0.44
UBE3D-206ENST00000505226 BACE1P56817 501 aa12.31□□□□□ -0.44
UBE3D-206ENST00000505226 PTPN11Q06124 597 aaPredicted RBP12.31□□□□□ -0.44
UBE3D-206ENST00000505226 CXCL9Q07325 125 aa12.31□□□□□ -0.44
UBE3D-206ENST00000505226 LAMTOR4Q0VGL1 99 aa12.31□□□□□ -0.44
UBE3D-206ENST00000505226 WASHC5Q12768 1159 aa12.31□□□□□ -0.44
UBE3D-206ENST00000505226 SMAD1Q15797 465 aaKnown RBP12.31□□□□□ -0.44
UBE3D-206ENST00000505226 DNAL1Q4LDG9 190 aa12.31□□□□□ -0.44
UBE3D-206ENST00000505226 FASTKD1Q53R41 847 aaKnown RBP12.31□□□□□ -0.44
UBE3D-206ENST00000505226 TEDDM1Q5T9Z0 273 aa12.31□□□□□ -0.44
UBE3D-206ENST00000505226 MBLAC2Q68D91 279 aa12.31□□□□□ -0.44
UBE3D-206ENST00000505226 C1orf127Q8N9H9 656 aa12.31□□□□□ -0.44
UBE3D-206ENST00000505226 RNF149Q8NC42 400 aa12.31□□□□□ -0.44
UBE3D-206ENST00000505226 RNF217Q8TC41 542 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms