RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 MRPL17Q9NRX2 175 aaKnown RBP9.78□□□□□ -0.84
TPM3-218ENST00000505010 KLHL11Q9NVR0 708 aa9.78□□□□□ -0.84
TPM3-218ENST00000505010 ASNSD1Q9NWL6 643 aa9.78□□□□□ -0.84
TPM3-218ENST00000505010 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.78□□□□□ -0.84
TPM3-218ENST00000505010 EHD2Q9NZN4 543 aa9.78□□□□□ -0.84
TPM3-218ENST00000505010 STK39Q9UEW8 545 aa9.78□□□□□ -0.84
TPM3-218ENST00000505010 SLC27A5Q9Y2P5 690 aa9.78□□□□□ -0.84
TPM3-218ENST00000505010 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.78□□□□□ -0.84
TPM3-218ENST00000505010 USP15Q9Y4E8 981 aaPredicted RBP9.78□□□□□ -0.84
TPM3-218ENST00000505010 RNF8O76064 485 aa9.77□□□□□ -0.85
TPM3-218ENST00000505010 VNN2O95498 520 aa9.77□□□□□ -0.85
TPM3-218ENST00000505010 KRT1P04264 644 aa9.77□□□□□ -0.85
TPM3-218ENST00000505010 HAPLN1P10915 354 aaPredicted RBP9.77□□□□□ -0.85
TPM3-218ENST00000505010 TCF4P15884 667 aa9.77□□□□□ -0.85
TPM3-218ENST00000505010 NRIP1P48552 1158 aa9.77□□□□□ -0.85
TPM3-218ENST00000505010 SULT1E1P49888 294 aa9.77□□□□□ -0.85
TPM3-218ENST00000505010 RWDD2BP57060 319 aa9.77□□□□□ -0.85
TPM3-218ENST00000505010 RPL10AP62906 217 aaKnown RBP9.77□□□□□ -0.85
TPM3-218ENST00000505010 YWHAZP63104 245 aaKnown RBP9.77□□□□□ -0.85
TPM3-218ENST00000505010 ATP11AP98196 1134 aa9.77□□□□□ -0.85
TPM3-218ENST00000505010 DUSP4Q13115 394 aa9.77□□□□□ -0.85
TPM3-218ENST00000505010 ZNF211Q13398 564 aaPredicted RBP9.77□□□□□ -0.85
TPM3-218ENST00000505010 DDR2Q16832 855 aa9.77□□□□□ -0.85
TPM3-218ENST00000505010 C15orf59Q2T9L4 293 aaPredicted RBP9.77□□□□□ -0.85
TPM3-218ENST00000505010 ZFYVE27Q5T4F4 411 aa9.77□□□□□ -0.85
TPM3-218ENST00000505010 SEL1L2Q5TEA6 688 aa9.77□□□□□ -0.85
TPM3-218ENST00000505010 DCAF12L1Q5VU92 463 aa9.77□□□□□ -0.85
TPM3-218ENST00000505010 RBM23Q86U06 439 aaKnown RBP9.77□□□□□ -0.85
TPM3-218ENST00000505010 DEFB106AQ8N104 65 aa9.77□□□□□ -0.85
TPM3-218ENST00000505010 CEP112Q8N8E3 955 aa9.77□□□□□ -0.85
TPM3-218ENST00000505010 LRRN4CLQ8ND94 238 aa9.77□□□□□ -0.85
TPM3-218ENST00000505010 SCAMP5Q8TAC9 235 aa9.77□□□□□ -0.85
TPM3-218ENST00000505010 FAM172AQ8WUF8 416 aa9.77□□□□□ -0.85
TPM3-218ENST00000505010 UBE2Q2Q8WVN8 375 aa9.77□□□□□ -0.85
TPM3-218ENST00000505010 IRGQQ8WZA9 623 aa9.77□□□□□ -0.85
TPM3-218ENST00000505010 ALG3Q92685 438 aa9.77□□□□□ -0.85
TPM3-218ENST00000505010 MS4A14Q96JA4 679 aa9.77□□□□□ -0.85
TPM3-218ENST00000505010 CFAP57Q96MR6 1250 aa9.77□□□□□ -0.85
TPM3-218ENST00000505010 CLSTN3Q9BQT9 956 aa9.77□□□□□ -0.85
TPM3-218ENST00000505010 CARD9Q9H257 536 aa9.77□□□□□ -0.85
TPM3-218ENST00000505010 CRISPLD1Q9H336 500 aa9.77□□□□□ -0.85
TPM3-218ENST00000505010 NGRNQ9NPE2 291 aaKnown RBP9.77□□□□□ -0.85
TPM3-218ENST00000505010 ENTPD7Q9NQZ7 604 aa9.77□□□□□ -0.85
TPM3-218ENST00000505010 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.77□□□□□ -0.85
TPM3-218ENST00000505010 SMARCAL1Q9NZC9 954 aa9.77□□□□□ -0.85
TPM3-218ENST00000505010 PCDHA3Q9Y5H8 950 aa9.77□□□□□ -0.85
TPM3-218ENST00000505010 OBSL1O75147 1896 aa9.76□□□□□ -0.85
TPM3-218ENST00000505010 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.76□□□□□ -0.85
TPM3-218ENST00000505010 CTAGE15A4D2H0 777 aa9.76□□□□□ -0.85
TPM3-218ENST00000505010 YJEFN3A6XGL0 299 aa9.76□□□□□ -0.85
TPM3-218ENST00000505010 E7ENQ6 273 aa9.76□□□□□ -0.85
TPM3-218ENST00000505010 PGRMC1O00264 195 aaKnown RBP9.76□□□□□ -0.85
TPM3-218ENST00000505010 PDE2AO00408 941 aaPredicted RBP9.76□□□□□ -0.85
TPM3-218ENST00000505010 CES2O00748 559 aa9.76□□□□□ -0.85
TPM3-218ENST00000505010 TNFRSF10BO14763 440 aa9.76□□□□□ -0.85
TPM3-218ENST00000505010 CAPN9O14815 690 aa9.76□□□□□ -0.85
TPM3-218ENST00000505010 LRCH4O75427 683 aa9.76□□□□□ -0.85
TPM3-218ENST00000505010 PDGFBP01127 241 aaPredicted RBP9.76□□□□□ -0.85
TPM3-218ENST00000505010 LTFP02788 710 aa9.76□□□□□ -0.85
TPM3-218ENST00000505010 GLI1P08151 1106 aa9.76□□□□□ -0.85
TPM3-218ENST00000505010 CTAGE8P0CG41 777 aa9.76□□□□□ -0.85
TPM3-218ENST00000505010 CTSAP10619 480 aa9.76□□□□□ -0.85
TPM3-218ENST00000505010 DNAJB1P25685 340 aa9.76□□□□□ -0.85
TPM3-218ENST00000505010 MATKP42679 507 aa9.76□□□□□ -0.85
TPM3-218ENST00000505010 PAFAH1B1P43034 410 aa9.76□□□□□ -0.85
TPM3-218ENST00000505010 PTPN9P43378 593 aa9.76□□□□□ -0.85
TPM3-218ENST00000505010 SMC1AQ14683 1233 aaKnown RBP9.76□□□□□ -0.85
TPM3-218ENST00000505010 ACAP1Q15027 740 aa9.76□□□□□ -0.85
TPM3-218ENST00000505010 HADHQ16836 314 aaKnown RBP9.76□□□□□ -0.85
TPM3-218ENST00000505010 CCDC14Q49A88 953 aa9.76□□□□□ -0.85
TPM3-218ENST00000505010 DCAF6Q58WW2 860 aa9.76□□□□□ -0.85
TPM3-218ENST00000505010 ODF2Q5BJF6 829 aa9.76□□□□□ -0.85
TPM3-218ENST00000505010 SH3PXD2AQ5TCZ1 1133 aa9.76□□□□□ -0.85
TPM3-218ENST00000505010 TPGS2Q68CL5 300 aa9.76□□□□□ -0.85
TPM3-218ENST00000505010 ARCQ7LC44 396 aa9.76□□□□□ -0.85
TPM3-218ENST00000505010 ADGRD2Q7Z7M1 963 aa9.76□□□□□ -0.85
TPM3-218ENST00000505010 CTAGE6Q86UF2 777 aa9.76□□□□□ -0.85
TPM3-218ENST00000505010 CREG2Q8IUH2 290 aa9.76□□□□□ -0.85
TPM3-218ENST00000505010 CCDC50Q8IVM0 306 aa9.76□□□□□ -0.85
TPM3-218ENST00000505010 CTAGE4Q8IX94 777 aa9.76□□□□□ -0.85
TPM3-218ENST00000505010 KATNAL2Q8IYT4 538 aa9.76□□□□□ -0.85
TPM3-218ENST00000505010 NUP93Q8N1F7 819 aa9.76□□□□□ -0.85
TPM3-218ENST00000505010 SPPL3Q8TCT6 385 aa9.76□□□□□ -0.85
TPM3-218ENST00000505010 GPR152Q8TDT2 470 aa9.76□□□□□ -0.85
TPM3-218ENST00000505010 ACSF2Q96CM8 615 aaPredicted RBP9.76□□□□□ -0.85
TPM3-218ENST00000505010 SLC2A13Q96QE2 648 aa9.76□□□□□ -0.85
TPM3-218ENST00000505010 TBCBQ99426 244 aa9.76□□□□□ -0.85
TPM3-218ENST00000505010 TCF25Q9BQ70 676 aa9.76□□□□□ -0.85
TPM3-218ENST00000505010 TRIM62Q9BVG3 475 aa9.76□□□□□ -0.85
TPM3-218ENST00000505010 FAM204AQ9H8W3 233 aa9.76□□□□□ -0.85
TPM3-218ENST00000505010 ZWILCHQ9H900 591 aa9.76□□□□□ -0.85
TPM3-218ENST00000505010 POPDC2Q9HBU9 364 aa9.76□□□□□ -0.85
TPM3-218ENST00000505010 AFF4Q9UHB7 1163 aaKnown RBP9.76□□□□□ -0.85
TPM3-218ENST00000505010 STAP1Q9ULZ2 295 aa9.76□□□□□ -0.85
TPM3-218ENST00000505010 SSX2IPQ9Y2D8 614 aa9.76□□□□□ -0.85
TPM3-218ENST00000505010 MTCL1Q9Y4B5 1905 aaKnown RBP9.76□□□□□ -0.85
TPM3-218ENST00000505010 CACNA1BQ00975 2339 aa9.75□□□□□ -0.85
TPM3-218ENST00000505010 SYNJ2BP-COX16A0A087WUM0 186 aa9.75□□□□□ -0.85
TPM3-218ENST00000505010 PRRG1O14668 218 aa9.75□□□□□ -0.85
TPM3-218ENST00000505010 TEX28O15482 410 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms