RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 USP13Q92995 863 aaPredicted RBP13.88□□□□□ -0.19
PDLIM7-212ENST00000504380 ZNF653Q96CK0 615 aa13.88□□□□□ -0.19
PDLIM7-212ENST00000504380 ACSF2Q96CM8 615 aaPredicted RBP13.88□□□□□ -0.19
PDLIM7-212ENST00000504380 ASB16Q96NS5 453 aa13.88□□□□□ -0.19
PDLIM7-212ENST00000504380 LRRC3BQ96PB8 259 aa13.88□□□□□ -0.19
PDLIM7-212ENST00000504380 KXD1Q9BQD3 176 aa13.88□□□□□ -0.19
PDLIM7-212ENST00000504380 NACA2Q9H009 215 aa13.88□□□□□ -0.19
PDLIM7-212ENST00000504380 THAP2Q9H0W7 228 aa13.88□□□□□ -0.19
PDLIM7-212ENST00000504380 EPHX3Q9H6B9 360 aa13.88□□□□□ -0.19
PDLIM7-212ENST00000504380 ABCC13Q9NSE7 274 aa13.88□□□□□ -0.19
PDLIM7-212ENST00000504380 CLIC5Q9NZA1 410 aa13.88□□□□□ -0.19
PDLIM7-212ENST00000504380 GDE1Q9NZC3 331 aa13.88□□□□□ -0.19
PDLIM7-212ENST00000504380 NR2E1Q9Y466 385 aa13.88□□□□□ -0.19
PDLIM7-212ENST00000504380 CPQQ9Y646 472 aa13.88□□□□□ -0.19
PDLIM7-212ENST00000504380 TCRBV5S1A1TA0A578 114 aa13.87□□□□□ -0.19
PDLIM7-212ENST00000504380 LOC730098B7Z3J9 87 aa13.87□□□□□ -0.19
PDLIM7-212ENST00000504380 CAPN9O14815 690 aa13.87□□□□□ -0.19
PDLIM7-212ENST00000504380 SART1O43290 800 aaKnown RBP13.87□□□□□ -0.19
PDLIM7-212ENST00000504380 MSI1O43347 362 aaKnown RBP13.87□□□□□ -0.19
PDLIM7-212ENST00000504380 GPR37L1O60883 481 aa13.87□□□□□ -0.19
PDLIM7-212ENST00000504380 ASGR2P07307 311 aa13.87□□□□□ -0.19
PDLIM7-212ENST00000504380 TFE3P19532 575 aaPredicted RBP13.87□□□□□ -0.19
PDLIM7-212ENST00000504380 ATP5C1P36542 298 aaKnown RBP13.87□□□□□ -0.19
PDLIM7-212ENST00000504380 AVPR1AP37288 418 aa13.87□□□□□ -0.19
PDLIM7-212ENST00000504380 PSEN1P49768 467 aa13.87□□□□□ -0.19
PDLIM7-212ENST00000504380 GSDMDP57764 484 aa13.87□□□□□ -0.19
PDLIM7-212ENST00000504380 ZP2Q05996 745 aa13.87□□□□□ -0.19
PDLIM7-212ENST00000504380 DCAF6Q58WW2 860 aa13.87□□□□□ -0.19
PDLIM7-212ENST00000504380 DNAJC24Q6P3W2 148 aa13.87□□□□□ -0.19
PDLIM7-212ENST00000504380 TOGARAM2Q6ZUX3 1019 aa13.87□□□□□ -0.19
PDLIM7-212ENST00000504380 SLC26A9Q7LBE3 791 aa13.87□□□□□ -0.19
PDLIM7-212ENST00000504380 ZDHHC17Q8IUH5 632 aa13.87□□□□□ -0.19
PDLIM7-212ENST00000504380 TMTC1Q8IUR5 882 aa13.87□□□□□ -0.19
PDLIM7-212ENST00000504380 ADHFE1Q8IWW8 467 aa13.87□□□□□ -0.19
PDLIM7-212ENST00000504380 ANP32BQ92688 251 aaKnown RBP13.87□□□□□ -0.19
PDLIM7-212ENST00000504380 SMARCD2Q92925 531 aa13.87□□□□□ -0.19
PDLIM7-212ENST00000504380 ARHGEF26Q96DR7 871 aa13.87□□□□□ -0.19
PDLIM7-212ENST00000504380 SLC2A13Q96QE2 648 aa13.87□□□□□ -0.19
PDLIM7-212ENST00000504380 SELENOOQ9BVL4 669 aa13.87□□□□□ -0.19
PDLIM7-212ENST00000504380 KLF16Q9BXK1 252 aaPredicted RBP13.87□□□□□ -0.19
PDLIM7-212ENST00000504380 POPDC2Q9HBU9 364 aa13.87□□□□□ -0.19
PDLIM7-212ENST00000504380 EPS15L1Q9UBC2 864 aa13.87□□□□□ -0.19
PDLIM7-212ENST00000504380 CNOT8Q9UFF9 292 aaKnown RBP13.87□□□□□ -0.19
PDLIM7-212ENST00000504380 DNMT3LQ9UJW3 386 aa13.87□□□□□ -0.19
PDLIM7-212ENST00000504380 TMEM59LQ9UK28 342 aa13.87□□□□□ -0.19
PDLIM7-212ENST00000504380 TFR2Q9UP52 801 aa13.87□□□□□ -0.19
PDLIM7-212ENST00000504380 USTQ9Y2C2 406 aa13.87□□□□□ -0.19
PDLIM7-212ENST00000504380 SYNJ2BP-COX16A0A087WUM0 186 aa13.86□□□□□ -0.19
PDLIM7-212ENST00000504380 SLC12A8A0AV02 714 aa13.86□□□□□ -0.19
PDLIM7-212ENST00000504380 HEPACAM2A8MVW5 462 aa13.86□□□□□ -0.19
PDLIM7-212ENST00000504380 HSF2BPO75031 334 aa13.86□□□□□ -0.19
PDLIM7-212ENST00000504380 DAB1O75553 588 aa13.86□□□□□ -0.19
PDLIM7-212ENST00000504380 OLFM2O95897 454 aa13.86□□□□□ -0.19
PDLIM7-212ENST00000504380 RFC1P35251 1148 aaPredicted RBP13.86□□□□□ -0.19
PDLIM7-212ENST00000504380 FLT3P36888 993 aa13.86□□□□□ -0.19
PDLIM7-212ENST00000504380 TUBP50607 506 aa13.86□□□□□ -0.19
PDLIM7-212ENST00000504380 RPL7AP62424 266 aaKnown RBP13.86□□□□□ -0.19
PDLIM7-212ENST00000504380 SLC7A9P82251 487 aa13.86□□□□□ -0.19
PDLIM7-212ENST00000504380 GRM2Q14416 872 aa13.86□□□□□ -0.19
PDLIM7-212ENST00000504380 RAB6CQ53S08 254 aa13.86□□□□□ -0.19
PDLIM7-212ENST00000504380 TMEM31Q5JXX7 168 aa13.86□□□□□ -0.19
PDLIM7-212ENST00000504380 TAC4Q86UU9 113 aa13.86□□□□□ -0.19
PDLIM7-212ENST00000504380 ZDHHC14Q8IZN3 488 aa13.86□□□□□ -0.19
PDLIM7-212ENST00000504380 DQX1Q8TE96 717 aaKnown RBP13.86□□□□□ -0.19
PDLIM7-212ENST00000504380 SH3RF2Q8TEC5 729 aa13.86□□□□□ -0.19
PDLIM7-212ENST00000504380 RXFP2Q8WXD0 754 aa13.86□□□□□ -0.19
PDLIM7-212ENST00000504380 ZFRQ96KR1 1074 aaKnown RBP13.86□□□□□ -0.19
PDLIM7-212ENST00000504380 ADAM33Q9BZ11 813 aa13.86□□□□□ -0.19
PDLIM7-212ENST00000504380 TRIM7Q9C029 511 aa13.86□□□□□ -0.19
PDLIM7-212ENST00000504380 RAB6CQ9H0N0 254 aa13.86□□□□□ -0.19
PDLIM7-212ENST00000504380 CD320Q9NPF0 282 aa13.86□□□□□ -0.19
PDLIM7-212ENST00000504380 TDP1Q9NUW8 608 aa13.86□□□□□ -0.19
PDLIM7-212ENST00000504380 ASNSD1Q9NWL6 643 aa13.86□□□□□ -0.19
PDLIM7-212ENST00000504380 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.86□□□□□ -0.19
PDLIM7-212ENST00000504380 MARCH2Q9P0N8 246 aa13.86□□□□□ -0.19
PDLIM7-212ENST00000504380 COX16Q9P0S2 106 aa13.86□□□□□ -0.19
PDLIM7-212ENST00000504380 WDR35Q9P2L0 1181 aa13.86□□□□□ -0.19
PDLIM7-212ENST00000504380 STRIP2Q9ULQ0 834 aa13.86□□□□□ -0.19
PDLIM7-212ENST00000504380 EPN1Q9Y6I3 576 aaPredicted RBP13.86□□□□□ -0.19
PDLIM7-212ENST00000504380 NUMBLQ9Y6R0 609 aa13.86□□□□□ -0.19
PDLIM7-212ENST00000504380 NUP210Q8TEM1 1887 aaPredicted RBP13.85□□□□□ -0.19
PDLIM7-212ENST00000504380 ANHXE9PGG2 379 aa13.85□□□□□ -0.19
PDLIM7-212ENST00000504380 LEFTY2O00292 366 aa13.85□□□□□ -0.19
PDLIM7-212ENST00000504380 DPYSL4O14531 572 aa13.85□□□□□ -0.19
PDLIM7-212ENST00000504380 GLI1P08151 1106 aa13.85□□□□□ -0.19
PDLIM7-212ENST00000504380 H2AFZP0C0S5 128 aa13.85□□□□□ -0.19
PDLIM7-212ENST00000504380 KRT3P12035 628 aa13.85□□□□□ -0.19
PDLIM7-212ENST00000504380 CYLC1P35663 651 aaPredicted RBP13.85□□□□□ -0.19
PDLIM7-212ENST00000504380 MAMLD1Q13495 774 aa13.85□□□□□ -0.19
PDLIM7-212ENST00000504380 HTR4Q13639 388 aa13.85□□□□□ -0.19
PDLIM7-212ENST00000504380 PPP1R15BQ5SWA1 713 aa13.85□□□□□ -0.19
PDLIM7-212ENST00000504380 PLEKHA7Q6IQ23 1121 aa13.85□□□□□ -0.19
PDLIM7-212ENST00000504380 MSANTD2Q6P1R3 559 aa13.85□□□□□ -0.19
PDLIM7-212ENST00000504380 VITQ6UXI7 678 aa13.85□□□□□ -0.19
PDLIM7-212ENST00000504380 H2AFVQ71UI9 128 aa13.85□□□□□ -0.19
PDLIM7-212ENST00000504380 LRRC8AQ8IWT6 810 aa13.85□□□□□ -0.19
PDLIM7-212ENST00000504380 C3orf20Q8ND61 904 aa13.85□□□□□ -0.19
PDLIM7-212ENST00000504380 ACRBPQ8NEB7 543 aa13.85□□□□□ -0.19
PDLIM7-212ENST00000504380 VCPIP1Q96JH7 1222 aa13.85□□□□□ -0.19
PDLIM7-212ENST00000504380 PDLIM2Q96JY6 352 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms