RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 ALLCQ8N6M5 410 aa14.7□□□□□ -0.06
PDLIM7-211ENST00000504318 TRIML1Q8N9V2 468 aa14.7□□□□□ -0.06
PDLIM7-211ENST00000504318 TERB1Q8NA31 727 aa14.7□□□□□ -0.06
PDLIM7-211ENST00000504318 MDGA1Q8NFP4 955 aa14.7□□□□□ -0.06
PDLIM7-211ENST00000504318 OLIG1Q8TAK6 271 aa14.7□□□□□ -0.06
PDLIM7-211ENST00000504318 KCTD13Q8WZ19 329 aa14.7□□□□□ -0.06
PDLIM7-211ENST00000504318 ULBP1Q9BZM6 244 aa14.7□□□□□ -0.06
PDLIM7-211ENST00000504318 ZDHHC4Q9NPG8 344 aa14.7□□□□□ -0.06
PDLIM7-211ENST00000504318 ARHGEF4Q9NR80 690 aa14.7□□□□□ -0.06
PDLIM7-211ENST00000504318 SEMA4GQ9NTN9 838 aa14.7□□□□□ -0.06
PDLIM7-211ENST00000504318 DNMT3LQ9UJW3 386 aa14.7□□□□□ -0.06
PDLIM7-211ENST00000504318 GMEB2Q9UKD1 530 aa14.7□□□□□ -0.06
PDLIM7-211ENST00000504318 STARD13Q9Y3M8 1113 aa14.7□□□□□ -0.06
PDLIM7-211ENST00000504318 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.7□□□□□ -0.06
PDLIM7-211ENST00000504318 THADAQ6YHU6 1953 aa14.69□□□□□ -0.06
PDLIM7-211ENST00000504318 BICDL2A1A5D9 508 aa14.69□□□□□ -0.06
PDLIM7-211ENST00000504318 DCLK1O15075 740 aa14.69□□□□□ -0.06
PDLIM7-211ENST00000504318 PENKP01210 267 aaPredicted RBP14.69□□□□□ -0.06
PDLIM7-211ENST00000504318 APODP05090 189 aa14.69□□□□□ -0.06
PDLIM7-211ENST00000504318 PAEPP09466 180 aa14.69□□□□□ -0.06
PDLIM7-211ENST00000504318 VDRP11473 427 aa14.69□□□□□ -0.06
PDLIM7-211ENST00000504318 TRIM21P19474 475 aaKnown RBP14.69□□□□□ -0.06
PDLIM7-211ENST00000504318 RPL34P49207 117 aaKnown RBP14.69□□□□□ -0.06
PDLIM7-211ENST00000504318 TKTL1P51854 596 aa14.69□□□□□ -0.06
PDLIM7-211ENST00000504318 GCNT1Q02742 428 aa14.69□□□□□ -0.06
PDLIM7-211ENST00000504318 BST2Q10589 180 aaKnown RBP14.69□□□□□ -0.06
PDLIM7-211ENST00000504318 KCNH2Q12809 1159 aa14.69□□□□□ -0.06
PDLIM7-211ENST00000504318 CSRP2Q16527 193 aa14.69□□□□□ -0.06
PDLIM7-211ENST00000504318 CCDC40Q4G0X9 1142 aa14.69□□□□□ -0.06
PDLIM7-211ENST00000504318 HSF5Q4G112 596 aaPredicted RBP14.69□□□□□ -0.06
PDLIM7-211ENST00000504318 SGO2Q562F6 1265 aa14.69□□□□□ -0.06
PDLIM7-211ENST00000504318 C10orf120Q5SQS8 335 aa14.69□□□□□ -0.06
PDLIM7-211ENST00000504318 TOGARAM2Q6ZUX3 1019 aa14.69□□□□□ -0.06
PDLIM7-211ENST00000504318 ERMP1Q7Z2K6 904 aa14.69□□□□□ -0.06
PDLIM7-211ENST00000504318 CCDC33Q8N5R6 958 aa14.69□□□□□ -0.06
PDLIM7-211ENST00000504318 NAT16Q8N8M0 369 aa14.69□□□□□ -0.06
PDLIM7-211ENST00000504318 EHBP1Q8NDI1 1231 aa14.69□□□□□ -0.06
PDLIM7-211ENST00000504318 SLC35F5Q8WV83 523 aa14.69□□□□□ -0.06
PDLIM7-211ENST00000504318 LOXL4Q96JB6 756 aa14.69□□□□□ -0.06
PDLIM7-211ENST00000504318 CNOT6LQ96LI5 555 aaKnown RBP14.69□□□□□ -0.06
PDLIM7-211ENST00000504318 SRRTQ9BXP5 876 aaKnown RBP14.69□□□□□ -0.06
PDLIM7-211ENST00000504318 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.69□□□□□ -0.06
PDLIM7-211ENST00000504318 SPTBN2O15020 2390 aa14.68□□□□□ -0.06
PDLIM7-211ENST00000504318 MUC22E2RYF6 1773 aaPredicted RBP14.68□□□□□ -0.06
PDLIM7-211ENST00000504318 YJEFN3A6XGL0 299 aa14.68□□□□□ -0.06
PDLIM7-211ENST00000504318 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.68□□□□□ -0.06
PDLIM7-211ENST00000504318 PRRT4C9JH25 899 aa14.68□□□□□ -0.06
PDLIM7-211ENST00000504318 E7ENQ6 273 aa14.68□□□□□ -0.06
PDLIM7-211ENST00000504318 KLF8O95600 359 aaPredicted RBP14.68□□□□□ -0.06
PDLIM7-211ENST00000504318 ZBED1O96006 694 aa14.68□□□□□ -0.06
PDLIM7-211ENST00000504318 TYRP14679 529 aa14.68□□□□□ -0.06
PDLIM7-211ENST00000504318 TIE1P35590 1138 aa14.68□□□□□ -0.06
PDLIM7-211ENST00000504318 ATXN1P54253 815 aaKnown RBP14.68□□□□□ -0.06
PDLIM7-211ENST00000504318 YWHAGP61981 247 aaKnown RBP eCLIP14.68□□□□□ -0.06
PDLIM7-211ENST00000504318 ADIGQ0VDE8 80 aa14.68□□□□□ -0.06
PDLIM7-211ENST00000504318 NFKBIBQ15653 356 aa14.68□□□□□ -0.06
PDLIM7-211ENST00000504318 FYB2Q5VWT5 728 aa14.68□□□□□ -0.06
PDLIM7-211ENST00000504318 PMF1Q6P1K2 205 aa14.68□□□□□ -0.06
PDLIM7-211ENST00000504318 TMEM270Q6UE05 265 aa14.68□□□□□ -0.06
PDLIM7-211ENST00000504318 PRR23CQ6ZRP0 262 aa14.68□□□□□ -0.06
PDLIM7-211ENST00000504318 CACNA2D4Q7Z3S7 1137 aa14.68□□□□□ -0.06
PDLIM7-211ENST00000504318 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.68□□□□□ -0.06
PDLIM7-211ENST00000504318 TXNDC5Q8NBS9 432 aaKnown RBP14.68□□□□□ -0.06
PDLIM7-211ENST00000504318 RBBP8NLQ8NC74 664 aaPredicted RBP14.68□□□□□ -0.06
PDLIM7-211ENST00000504318 CCDC26Q8TAB7 109 aa14.68□□□□□ -0.06
PDLIM7-211ENST00000504318 UBA3Q8TBC4 463 aa14.68□□□□□ -0.06
PDLIM7-211ENST00000504318 SECISBP2LQ93073 1101 aaKnown RBP14.68□□□□□ -0.06
PDLIM7-211ENST00000504318 NT5C1BQ96P26 610 aa14.68□□□□□ -0.06
PDLIM7-211ENST00000504318 GBP4Q96PP9 640 aa14.68□□□□□ -0.06
PDLIM7-211ENST00000504318 RAB23Q9ULC3 237 aa14.68□□□□□ -0.06
PDLIM7-211ENST00000504318 KIAA1257Q9ULG3 409 aa14.68□□□□□ -0.06
PDLIM7-211ENST00000504318 NCOR2Q9Y618 2525 aa14.68□□□□□ -0.06
PDLIM7-211ENST00000504318 CKAP5Q14008 2032 aa14.67□□□□□ -0.06
PDLIM7-211ENST00000504318 A0A1W2PQF6 199 aa14.67□□□□□ -0.06
PDLIM7-211ENST00000504318 NEDD8-MDP1E9PL57 170 aa14.67□□□□□ -0.06
PDLIM7-211ENST00000504318 SETSIPP0DME0 302 aa14.67□□□□□ -0.06
PDLIM7-211ENST00000504318 RALAP11233 206 aa14.67□□□□□ -0.06
PDLIM7-211ENST00000504318 DAOAP59103 153 aa14.67□□□□□ -0.06
PDLIM7-211ENST00000504318 YWHAEP62258 255 aaKnown RBP14.67□□□□□ -0.06
PDLIM7-211ENST00000504318 LMNB2Q03252 620 aa14.67□□□□□ -0.06
PDLIM7-211ENST00000504318 EFEMP1Q12805 493 aa14.67□□□□□ -0.06
PDLIM7-211ENST00000504318 PUM1Q14671 1186 aaKnown RBP eCLIP14.67□□□□□ -0.063e-7■□□□□ 10.6
PDLIM7-211ENST00000504318 TRIP4Q15650 581 aaPredicted RBP14.67□□□□□ -0.06
PDLIM7-211ENST00000504318 CNGA2Q16280 664 aa14.67□□□□□ -0.06
PDLIM7-211ENST00000504318 CAMK4Q16566 473 aa14.67□□□□□ -0.06
PDLIM7-211ENST00000504318 DPY19L2P1Q6NXN4 242 aa14.67□□□□□ -0.06
PDLIM7-211ENST00000504318 CLEC17AQ6ZS10 378 aa14.67□□□□□ -0.06
PDLIM7-211ENST00000504318 TPGS1Q6ZTW0 290 aa14.67□□□□□ -0.06
PDLIM7-211ENST00000504318 CEP68Q76N32 757 aa14.67□□□□□ -0.06
PDLIM7-211ENST00000504318 RRAGAQ7L523 313 aa14.67□□□□□ -0.06
PDLIM7-211ENST00000504318 PPM1KQ8N3J5 372 aa14.67□□□□□ -0.06
PDLIM7-211ENST00000504318 TSTD1Q8NFU3 115 aa14.67□□□□□ -0.06
PDLIM7-211ENST00000504318 KCNV2Q8TDN2 545 aa14.67□□□□□ -0.06
PDLIM7-211ENST00000504318 CDK5RAP1Q96SZ6 601 aaKnown RBP14.67□□□□□ -0.06
PDLIM7-211ENST00000504318 ACOX2Q99424 681 aa14.67□□□□□ -0.06
PDLIM7-211ENST00000504318 NACA2Q9H009 215 aa14.67□□□□□ -0.06
PDLIM7-211ENST00000504318 RXFP3Q9NSD7 469 aa14.67□□□□□ -0.06
PDLIM7-211ENST00000504318 DEC1Q9P2X7 70 aa14.67□□□□□ -0.06
PDLIM7-211ENST00000504318 RWDD2AQ9UIY3 292 aa14.67□□□□□ -0.06
PDLIM7-211ENST00000504318 STOML2Q9UJZ1 356 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms